RNA–Protein interactions for RNA: YHR089C

GAR1, Transcript of Protein component of the H/ACA snoRNP pseudouridylase complex, yeastyeast

Gene GAR1, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GAR1YHR089C YPR147CQ06522 304 aaKnown RBP12.55□□□□□ -0.4
GAR1YHR089C YGK3Q12222 375 aaPredicted RBP12.55□□□□□ -0.4
GAR1YHR089C YAL064W-BO13512 126 aa12.54□□□□□ -0.4
GAR1YHR089C UTR1P21373 530 aa12.54□□□□□ -0.4
GAR1YHR089C VPH2P32341 215 aa12.54□□□□□ -0.4
GAR1YHR089C MDH3P32419 343 aaKnown RBP RIP-Chip data12.54□□□□□ -0.4not detected
GAR1YHR089C ECM4P36156 370 aa12.54□□□□□ -0.4
GAR1YHR089C RFC4P40339 323 aaKnown RBP12.54□□□□□ -0.4
GAR1YHR089C NIT2P47016 307 aa12.54□□□□□ -0.4
GAR1YHR089C UBX6P47049 396 aa12.54□□□□□ -0.4
GAR1YHR089C NQM1P53228 333 aaPredicted RBP12.54□□□□□ -0.4
GAR1YHR089C RRN9P53437 365 aa12.54□□□□□ -0.4
GAR1YHR089C TRA1P38811 3744 aa12.53□□□□□ -0.4
GAR1YHR089C MDH2P22133 377 aa12.53□□□□□ -0.4
GAR1YHR089C CNA1P23287 553 aa12.53□□□□□ -0.4
GAR1YHR089C CHK1P38147 527 aa12.53□□□□□ -0.4
GAR1YHR089C MLH1P38920 769 aa12.53□□□□□ -0.4
GAR1YHR089C KRE29P40026 464 aa12.53□□□□□ -0.4
GAR1YHR089C SSY5P47002 699 aa12.53□□□□□ -0.4
GAR1YHR089C BUD17P53727 317 aa12.53□□□□□ -0.4
GAR1YHR089C GAS2Q06135 555 aa12.53□□□□□ -0.4
GAR1YHR089C PCL9Q12477 304 aa12.53□□□□□ -0.4
GAR1YHR089C YGR161W-CQ3E744 92 aa12.53□□□□□ -0.4
GAR1YHR089C BLM10P43583 2143 aa12.52□□□□□ -0.4
GAR1YHR089C CBP6P07253 162 aaPredicted RBP12.52□□□□□ -0.41
GAR1YHR089C PHO2P07269 559 aa12.52□□□□□ -0.41
GAR1YHR089C ERG9P29704 444 aa12.52□□□□□ -0.41
GAR1YHR089C BAP2P38084 609 aa12.52□□□□□ -0.41
GAR1YHR089C SAM37P50110 327 aa12.52□□□□□ -0.41
GAR1YHR089C MNT4P53745 580 aa12.52□□□□□ -0.41
GAR1YHR089C TMA20P89886 181 aaPredicted RBP12.52□□□□□ -0.41
GAR1YHR089C SPO19Q03029 223 aa12.52□□□□□ -0.41
GAR1YHR089C STE12P13574 688 aa12.51□□□□□ -0.41
GAR1YHR089C GAS1P22146 559 aaKnown RBP12.51□□□□□ -0.41
GAR1YHR089C MGE1P38523 228 aa12.51□□□□□ -0.41
GAR1YHR089C MDM31P38880 579 aa12.51□□□□□ -0.41
GAR1YHR089C YER184CP39961 794 aa12.51□□□□□ -0.41
GAR1YHR089C HIS6P40545 261 aa12.51□□□□□ -0.41
GAR1YHR089C NAS2P40555 220 aa12.51□□□□□ -0.41
GAR1YHR089C YMR087WQ04299 284 aa12.51□□□□□ -0.41
GAR1YHR089C HRI1Q05905 244 aaKnown RBP12.51□□□□□ -0.41
GAR1YHR089C ATG17Q06410 417 aa12.51□□□□□ -0.41
GAR1YHR089C NIP7Q08962 181 aaKnown RBP12.51□□□□□ -0.41
GAR1YHR089C YDL176WQ12027 708 aa12.51□□□□□ -0.41
GAR1YHR089C NKP1Q12493 238 aa12.51□□□□□ -0.41
GAR1YHR089C LSO1Q3E827 93 aa12.51□□□□□ -0.41
GAR1YHR089C MET2P08465 486 aa12.5□□□□□ -0.41
GAR1YHR089C YCL002CP25565 263 aa12.5□□□□□ -0.41
GAR1YHR089C THI4P32318 326 aa12.5□□□□□ -0.41
GAR1YHR089C VMA6P32366 345 aaKnown RBP12.5□□□□□ -0.41
GAR1YHR089C NDC1P32500 655 aa12.5□□□□□ -0.41
GAR1YHR089C SUR1P33300 382 aa12.5□□□□□ -0.41
GAR1YHR089C COS9P36034 407 aa12.5□□□□□ -0.41
GAR1YHR089C NTA1P40354 457 aa12.5□□□□□ -0.41
GAR1YHR089C POP1P41812 875 aa12.5□□□□□ -0.41
GAR1YHR089C BRR6P53062 197 aa12.5□□□□□ -0.41
GAR1YHR089C SOK2P53438 785 aaPredicted RBP12.5□□□□□ -0.41
GAR1YHR089C BSC5P53755 489 aa12.5□□□□□ -0.41
GAR1YHR089C ARP10Q04549 284 aa12.5□□□□□ -0.41
GAR1YHR089C EMG1Q06287 252 aaKnown RBP12.5□□□□□ -0.41
GAR1YHR089C TAZ1Q06510 381 aa12.5□□□□□ -0.41
GAR1YHR089C GSH2Q08220 491 aa12.5□□□□□ -0.41
GAR1YHR089C MET17P06106 444 aa12.49□□□□□ -0.41
GAR1YHR089C ENA1P13587 1091 aa12.49□□□□□ -0.41
GAR1YHR089C MAL32P38158 584 aa12.49□□□□□ -0.41
GAR1YHR089C AIM10P39965 576 aaKnown RBP12.49□□□□□ -0.41
GAR1YHR089C MSY1P48527 492 aa12.49□□□□□ -0.41
GAR1YHR089C MAL12P53341 584 aa12.49□□□□□ -0.41
GAR1YHR089C ENA2Q01896 1091 aa12.49□□□□□ -0.41
GAR1YHR089C FIN1Q03898 291 aa12.49□□□□□ -0.41
GAR1YHR089C YLR352WQ06479 807 aa12.49□□□□□ -0.41
GAR1YHR089C ENA5Q12691 1091 aa12.49□□□□□ -0.41
GAR1YHR089C MCM10P32354 571 aa12.48□□□□□ -0.41
GAR1YHR089C VBA2P38358 474 aaKnown RBP12.48□□□□□ -0.41
GAR1YHR089C YHR035WP38769 630 aa12.48□□□□□ -0.41
GAR1YHR089C LYS5P50113 272 aa12.48□□□□□ -0.41
GAR1YHR089C APM1Q00776 475 aaPredicted RBP12.48□□□□□ -0.41
GAR1YHR089C RAS1P01119 309 aa12.47□□□□□ -0.41
GAR1YHR089C PTC6P25646 442 aa12.47□□□□□ -0.41
GAR1YHR089C GPI16P38875 610 aa12.47□□□□□ -0.41
GAR1YHR089C NUP116Q02630 1113 aa12.47□□□□□ -0.41
GAR1YHR089C MRPL51Q06090 140 aaPredicted RBP12.47□□□□□ -0.41
GAR1YHR089C SEC16P48415 2195 aaKnown RBP12.47□□□□□ -0.41
GAR1YHR089C SEC12P11655 471 aa12.46□□□□□ -0.41
GAR1YHR089C AMN1P38285 549 aaPredicted RBP12.46□□□□□ -0.41
GAR1YHR089C BUR6P40096 142 aa12.46□□□□□ -0.41
GAR1YHR089C SFH5P47008 294 aa12.46□□□□□ -0.41
GAR1YHR089C YDR179W-AQ03983 463 aa12.46□□□□□ -0.41
GAR1YHR089C AGE1Q04412 482 aa12.46□□□□□ -0.41
GAR1YHR089C YMR315WQ04869 349 aaKnown RBP12.46□□□□□ -0.41
GAR1YHR089C MIM1Q08176 113 aa12.46□□□□□ -0.41
GAR1YHR089C HMS1Q12398 434 aa12.46□□□□□ -0.41
GAR1YHR089C VCX1Q99385 411 aa12.46□□□□□ -0.41
GAR1YHR089C MDH1P17505 334 aaKnown RBP RIP-Chip data12.45□□□□□ -0.42not detected
GAR1YHR089C FPS1P23900 669 aa12.45□□□□□ -0.42
GAR1YHR089C PPA2P28239 310 aa12.45□□□□□ -0.42
GAR1YHR089C CAM1P29547 415 aaKnown RBP12.45□□□□□ -0.42
GAR1YHR089C AIM3P38266 947 aaKnown RBP12.45□□□□□ -0.42
GAR1YHR089C PHO90P39535 881 aa12.45□□□□□ -0.42
GAR1YHR089C HSV2P50079 448 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms