RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W NBL1Q3E7Y6 73 aa1.93□□□□□ -2.1
VMA21YGR105W MIG1P27705 504 aa1.92□□□□□ -2.1
VMA21YGR105W POT1P27796 417 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
VMA21YGR105W PET8P38921 284 aa1.92□□□□□ -2.1
VMA21YGR105W ASP1P38986 381 aaPredicted RBP1.92□□□□□ -2.1
VMA21YGR105W YIL089WP40500 205 aa1.92□□□□□ -2.1
VMA21YGR105W SHE4P51534 789 aa1.92□□□□□ -2.1
VMA21YGR105W RCF1Q03713 159 aa1.92□□□□□ -2.1
VMA21YGR105W RDL2Q08742 149 aaKnown RBP1.92□□□□□ -2.1
VMA21YGR105W SGT2Q12118 346 aaKnown RBP1.92□□□□□ -2.1
VMA21YGR105W TRM10Q12400 293 aa1.92□□□□□ -2.1
VMA21YGR105W MET2P08465 486 aa1.91□□□□□ -2.1
VMA21YGR105W MEI5P32489 222 aa1.91□□□□□ -2.1
VMA21YGR105W CTM1P38818 585 aa1.91□□□□□ -2.1
VMA21YGR105W YFR045WP43617 309 aa1.91□□□□□ -2.1
VMA21YGR105W YNL146WP53906 100 aa1.91□□□□□ -2.1
VMA21YGR105W ACT1P60010 375 aaKnown RBP1.91□□□□□ -2.1
VMA21YGR105W YPL113CQ02961 396 aa1.91□□□□□ -2.1
VMA21YGR105W MIX17Q03667 156 aa1.91□□□□□ -2.1
VMA21YGR105W PML1Q07930 204 aaPredicted RBP1.91□□□□□ -2.1
VMA21YGR105W IES3Q12345 250 aa1.91□□□□□ -2.1
VMA21YGR105W PRM4Q12498 284 aa1.91□□□□□ -2.1
VMA21YGR105W RBK1P25332 333 aa1.9□□□□□ -2.11
VMA21YGR105W BUD2P33314 1104 aa1.9□□□□□ -2.11
VMA21YGR105W SIF2P38262 535 aa1.9□□□□□ -2.11
VMA21YGR105W ECO1P43605 281 aa1.9□□□□□ -2.11
VMA21YGR105W HSH155P49955 971 aaKnown RBP1.9□□□□□ -2.11
VMA21YGR105W TAF6P53040 516 aa1.9□□□□□ -2.11
VMA21YGR105W YGL114WP53134 725 aa1.9□□□□□ -2.11
VMA21YGR105W YNR066CP53752 436 aa1.9□□□□□ -2.11
VMA21YGR105W YPL080CQ02826 108 aa1.9□□□□□ -2.11
VMA21YGR105W CSI1Q04368 295 aa1.9□□□□□ -2.11
VMA21YGR105W DTD1Q07648 150 aaKnown RBP1.9□□□□□ -2.11
VMA21YGR105W CBP2P03874 630 aaPredicted RBP1.89□□□□□ -2.11
VMA21YGR105W TAL1P15019 335 aaKnown RBP1.89□□□□□ -2.11
VMA21YGR105W CDC42P19073 191 aa1.89□□□□□ -2.11
VMA21YGR105W SCC4P40090 624 aa1.89□□□□□ -2.11
VMA21YGR105W BUD13P46947 266 aaPredicted RBP1.89□□□□□ -2.11
VMA21YGR105W FYV8P46949 817 aaKnown RBP1.89□□□□□ -2.11
VMA21YGR105W RLP24Q07915 199 aaKnown RBP1.89□□□□□ -2.11
VMA21YGR105W ERP3Q12403 225 aa1.89□□□□□ -2.11
VMA21YGR105W KRE1P17260 313 aa1.88□□□□□ -2.11
VMA21YGR105W VMA5P31412 392 aaKnown RBP1.88□□□□□ -2.11
VMA21YGR105W SUR1P33300 382 aa1.88□□□□□ -2.11
VMA21YGR105W MED8P38304 223 aa1.88□□□□□ -2.11
VMA21YGR105W EDC2P40023 145 aaPredicted RBP1.88□□□□□ -2.11
VMA21YGR105W YNL040WP53960 456 aaPredicted RBP1.88□□□□□ -2.11
VMA21YGR105W YDR114CQ04597 100 aa1.88□□□□□ -2.11
VMA21YGR105W BUR2Q05949 395 aa1.88□□□□□ -2.11
VMA21YGR105W CLP1Q08685 445 aaPredicted RBP1.88□□□□□ -2.11
VMA21YGR105W YPL245WQ12179 454 aaKnown RBP1.88□□□□□ -2.11
VMA21YGR105W TDH2P00358 332 aaKnown RBP1.87□□□□□ -2.11
VMA21YGR105W TDH3P00359 332 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
VMA21YGR105W ERD1P16151 362 aa1.87□□□□□ -2.11
VMA21YGR105W YKR032WP36127 104 aa1.87□□□□□ -2.11
VMA21YGR105W YER084WP40057 128 aa1.87□□□□□ -2.11
VMA21YGR105W YLR012CQ07927 99 aa1.87□□□□□ -2.11
VMA21YGR105W YOR292CQ08743 309 aa1.87□□□□□ -2.11
VMA21YGR105W YDR262WQ12331 272 aa1.87□□□□□ -2.11
VMA21YGR105W PRE7P23724 241 aaKnown RBP1.86□□□□□ -2.11
VMA21YGR105W RVB1Q03940 463 aaKnown RBP1.86□□□□□ -2.11
VMA21YGR105W PSY3Q12318 242 aa1.86□□□□□ -2.11
VMA21YGR105W MRX4Q12467 430 aa1.86□□□□□ -2.11
VMA21YGR105W ACB1P31787 87 aa1.85□□□□□ -2.11
VMA21YGR105W CSE1P33307 960 aa1.85□□□□□ -2.11
VMA21YGR105W YGR168CP53293 376 aa1.85□□□□□ -2.11
VMA21YGR105W PDR16P53860 351 aaKnown RBP1.85□□□□□ -2.11
VMA21YGR105W RGM1Q00453 211 aa1.85□□□□□ -2.11
VMA21YGR105W UBX2Q04228 584 aa1.85□□□□□ -2.11
VMA21YGR105W RPL18AP0CX49 186 aaKnown RBP1.84□□□□□ -2.11
VMA21YGR105W RPL18BP0CX50 186 aaKnown RBP1.84□□□□□ -2.11
VMA21YGR105W YBR062CP38239 180 aa1.84□□□□□ -2.11
VMA21YGR105W MED6P38782 295 aa1.84□□□□□ -2.11
VMA21YGR105W LIN1P38852 340 aaPredicted RBP1.84□□□□□ -2.11
VMA21YGR105W SOP4P39543 234 aaPredicted RBP1.84□□□□□ -2.11
VMA21YGR105W UFD1P53044 361 aa1.84□□□□□ -2.11
VMA21YGR105W SEC13Q04491 297 aaKnown RBP1.84□□□□□ -2.11
VMA21YGR105W RNR2P09938 399 aaKnown RBP1.83□□□□□ -2.12
VMA21YGR105W YEL043WP32618 956 aa1.83□□□□□ -2.12
VMA21YGR105W GPX1P36014 167 aa1.83□□□□□ -2.12
VMA21YGR105W AIM29P36154 155 aa1.83□□□□□ -2.12
VMA21YGR105W YER188WP40103 239 aa1.83□□□□□ -2.12
VMA21YGR105W YFL040WP43562 540 aa1.83□□□□□ -2.12
VMA21YGR105W YGR016WP53209 190 aa1.83□□□□□ -2.12
VMA21YGR105W IRC4Q03036 179 aa1.83□□□□□ -2.12
VMA21YGR105W FEX1Q08913 375 aa1.83□□□□□ -2.12
VMA21YGR105W FEX2Q08991 375 aa1.83□□□□□ -2.12
VMA21YGR105W VIK1Q12045 647 aa1.83□□□□□ -2.12
VMA21YGR105W YAK1P14680 807 aa1.82□□□□□ -2.12
VMA21YGR105W RSA4P25382 515 aaKnown RBP1.82□□□□□ -2.12
VMA21YGR105W APE4P38821 490 aa1.82□□□□□ -2.12
VMA21YGR105W NAS2P40555 220 aa1.82□□□□□ -2.12
VMA21YGR105W SNX41Q04053 625 aa1.82□□□□□ -2.12
VMA21YGR105W CDD1Q06549 142 aa1.82□□□□□ -2.12
VMA21YGR105W YPL278CQ08990 100 aa1.82□□□□□ -2.12
VMA21YGR105W YAL063C-AQ3E791 96 aa1.82□□□□□ -2.12
VMA21YGR105W GAL3P13045 520 aa1.81□□□□□ -2.12
VMA21YGR105W SNF6P18888 332 aa1.81□□□□□ -2.12
VMA21YGR105W YCR025CP25352 136 aa1.81□□□□□ -2.12
VMA21YGR105W SMI1P32566 505 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 124 ms