RNA–Protein interactions for RNA: YGL078C

DBP3, Transcript of RNA-Dependent ATPase, member of DExD/H-box family, yeast

Gene DBP3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP3	YGL078C	UTR1	P21373	530 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	SGF29	P25554	259 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	CNE1	P27825	502 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	FAA1	P30624	700 aa	Known RBP	3.75	□□□□□ -1.81
DBP3	YGL078C	DSS4	P32601	143 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	COX13	P32799	129 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	PTK1	P36002	662 aa	Predicted RBP	3.75	□□□□□ -1.81
DBP3	YGL078C	SOL2	P37262	315 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	YBR063C	P38083	404 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	ERV46	P39727	415 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	NPR2	P39923	615 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	RFC2	P40348	353 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	ATM1	P40416	690 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	CFD1	P40558	293 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	GLC8	P41818	229 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	CAK1	P43568	368 aa	Predicted RBP	3.75	□□□□□ -1.81
DBP3	YGL078C	YAE1	P47118	141 aa	Predicted RBP	3.75	□□□□□ -1.81
DBP3	YGL078C	ASK10	P48361	1146 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	PHB2	P50085	310 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	AIF1	P52923	378 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	ROG1	P53118	685 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	PKP2	P53170	491 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	BUD32	P53323	261 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	YPR003C	P53394	754 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	YNR071C	P53757	342 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	PRM1	P53835	661 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	ODC1	Q03028	310 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	YDR124W	Q04608	324 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	RTT103	Q05543	409 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	RKM5	Q12367	367 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	SKS1	Q12505	502 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	VMA9	Q3E7B6	73 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	COA6	Q3E846	104 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	SRN2	Q99176	213 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	BI3	Q9ZZW7	517 aa		3.75	□□□□□ -1.81
DBP3	YGL078C	TIM9	O74700	87 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	RPL31A	P0C2H8	113 aa	Known RBP	3.74	□□□□□ -1.81
DBP3	YGL078C	RPL31B	P0C2H9	113 aa	Known RBP	3.74	□□□□□ -1.81
DBP3	YGL078C	MATALPHA1	P0CY06	175 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	HMLALPHA1	P0CY07	175 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	RPL4A	P10664	362 aa	Known RBP	3.74	□□□□□ -1.81
DBP3	YGL078C	NAM2	P11325	894 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	REV1	P12689	985 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	MTF1	P14908	341 aa	Known RBP	3.74	□□□□□ -1.81
DBP3	YGL078C	ERD1	P16151	362 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	PET9	P18239	318 aa	Known RBP	3.74	□□□□□ -1.81
DBP3	YGL078C	FUN14	P18411	198 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	YPK2	P18961	677 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	SEC59	P20048	519 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	BET2	P20133	325 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	YCR090C	P25654	182 aa	Known RBP	3.74	□□□□□ -1.81
DBP3	YGL078C	BUB3	P26449	341 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	PRP45	P28004	379 aa	Predicted RBP	3.74	□□□□□ -1.81
DBP3	YGL078C	DEG1	P31115	442 aa	Known RBP	3.74	□□□□□ -1.81
DBP3	YGL078C	HOM6	P31116	359 aa	Known RBP	3.74	□□□□□ -1.81
DBP3	YGL078C	MRPL9	P31334	269 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	YSC83	P32792	385 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	FRE2	P36033	711 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	RIB1	P38066	345 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	SHG1	P38337	142 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	ALP1	P38971	573 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	AIM10	P39965	576 aa	Known RBP	3.74	□□□□□ -1.81
DBP3	YGL078C	COG3	P40094	801 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	RFC4	P40339	323 aa	Known RBP	3.74	□□□□□ -1.81
DBP3	YGL078C	GDS1	P41913	522 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	PTR3	P43606	678 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	RPL4B	P49626	362 aa	Known RBP	3.74	□□□□□ -1.81
DBP3	YGL078C	UFD1	P53044	361 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	VOA1	P53262	265 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	LSB1	P53281	241 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	GTR2	P53290	341 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	SSU72	P53538	206 aa	Predicted RBP	3.74	□□□□□ -1.81
DBP3	YGL078C	KTR6	P54070	446 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	MRP51	Q02950	344 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	TRI1	Q05024	226 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	RIF2	Q06208	395 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	CYK3	Q07533	885 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	ERG27	Q12452	347 aa	Known RBP	3.74	□□□□□ -1.81
DBP3	YGL078C	ZPS1	Q12512	249 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	EFG1	Q3E705	233 aa	Known RBP	3.74	□□□□□ -1.81
DBP3	YGL078C	RIM15	P43565	1770 aa		3.74	□□□□□ -1.81
DBP3	YGL078C	MOT1	P32333	1867 aa		3.73	□□□□□ -1.81
DBP3	YGL078C	ADE4	P04046	510 aa	Known RBP	3.73	□□□□□ -1.81
DBP3	YGL078C	NHP6B	P11633	99 aa	Known RBP	3.73	□□□□□ -1.81
DBP3	YGL078C	SST2	P11972	698 aa	Known RBP	3.73	□□□□□ -1.81
DBP3	YGL078C	URA6	P15700	204 aa		3.73	□□□□□ -1.81
DBP3	YGL078C	ZRC1	P20107	442 aa		3.73	□□□□□ -1.81
DBP3	YGL078C	RNA14	P25298	677 aa	Known RBP	3.73	□□□□□ -1.81
DBP3	YGL078C	YCL068C	P25593	260 aa		3.73	□□□□□ -1.81
DBP3	YGL078C	TMT1	P32643	299 aa		3.73	□□□□□ -1.81
DBP3	YGL078C	SHP1	P34223	423 aa		3.73	□□□□□ -1.81
DBP3	YGL078C	APE3	P37302	537 aa	Known RBP	3.73	□□□□□ -1.81
DBP3	YGL078C	ATG8	P38182	117 aa	RIP-Chip data	3.73	□□□□□ -1.81	not detected
DBP3	YGL078C	SUR2	P38992	349 aa		3.73	□□□□□ -1.81
DBP3	YGL078C	PAC2	P39937	518 aa		3.73	□□□□□ -1.81
DBP3	YGL078C	PRM10	P42946	383 aa		3.73	□□□□□ -1.81
DBP3	YGL078C	GAT1	P43574	510 aa		3.73	□□□□□ -1.81
DBP3	YGL078C	YFL012W	P43580	148 aa		3.73	□□□□□ -1.81
DBP3	YGL078C	ALT2	P52892	507 aa		3.73	□□□□□ -1.81
DBP3	YGL078C	YGL101W	P53144	215 aa		3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 148.2 ms