RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	MZM1	Q03429	123 aa	Predicted RBP	5.08	□□□□□ -1.6
VTC2	YFL004W	CUE4	Q04201	117 aa	Predicted RBP	5.08	□□□□□ -1.6
VTC2	YFL004W	TMS1	Q12116	473 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	Q0010	Q9ZZX9	128 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	SPT3	P06844	337 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	PRB1	P09232	635 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	PUT1	P09368	476 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	RNA15	P25299	296 aa	Predicted RBP	5.08	□□□□□ -1.6
VTC2	YFL004W	MRP17	P28778	131 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	CLB6	P32943	380 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	MSN4	P33749	630 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	DOA1	P36037	715 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	MRPL28	P36527	147 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	DHH1	P39517	506 aa	Known RBP	5.08	□□□□□ -1.6
VTC2	YFL004W	ALG8	P40351	577 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	IRC24	P40580	263 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	SNM1	P40993	198 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	AGX1	P43567	385 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	SLG1	P54867	378 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	IRC15	Q02733	499 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	VBA4	Q04602	768 aa	Known RBP	5.08	□□□□□ -1.6
VTC2	YFL004W	PIN2	Q12057	282 aa		5.08	□□□□□ -1.6
VTC2	YFL004W	CTT1	P06115	562 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	YOL163W	P0CF20	169 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	HOP1	P20050	605 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	EPT1	P22140	391 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	PRE9	P23638	258 aa	Known RBP	5.07	□□□□□ -1.6
VTC2	YFL004W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
VTC2	YFL004W	SNC2	P33328	115 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	YBR284W	P38150	797 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	EFM1	P38732	585 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	VAC8	P39968	578 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	SLZ1	P40167	298 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	PAM16	P42949	149 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	RPA34	P47006	233 aa	Predicted RBP	5.07	□□□□□ -1.6
VTC2	YFL004W	STE24	P47154	453 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	MPA43	P53583	542 aa	Predicted RBP	5.07	□□□□□ -1.6
VTC2	YFL004W	YAF9	P53930	226 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	ASI3	P53983	676 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	PUS5	Q06244	254 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	GAS5	Q08193	484 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	WTM2	Q12206	467 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	YLR099W-A	Q3E798	87 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	HTB1	P02293	131 aa	Known RBP	5.07	□□□□□ -1.6
VTC2	YFL004W	HTB2	P02294	131 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	SEC12	P11655	471 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	RSA4	P25382	515 aa	Known RBP	5.07	□□□□□ -1.6
VTC2	YFL004W	AHC2	P25649	128 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	MSK1	P32048	576 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	YKU70	P32807	602 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	SHP1	P34223	423 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	ASH1	P34233	588 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	TSA1	P34760	196 aa	Known RBP	5.07	□□□□□ -1.6
VTC2	YFL004W	SHE1	P38200	338 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	EHT1	P38295	451 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	CTF8	P38877	133 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	GET2	P40056	285 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	YHC3	P47040	408 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	TIM21	P53220	239 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	SHY1	P53266	389 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	FRE4	P53746	719 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	NRK1	P53915	240 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	RHO4	Q00246	291 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
VTC2	YFL004W	ERO1	Q03103	563 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	ECM7	Q06200	448 aa		5.07	□□□□□ -1.6
VTC2	YFL004W	COX5A	P00424	153 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	HIS1	P00498	297 aa	Known RBP	5.06	□□□□□ -1.6
VTC2	YFL004W	HAP2	P06774	265 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	RPL31A	P0C2H8	113 aa	Known RBP	5.06	□□□□□ -1.6
VTC2	YFL004W	RPL31B	P0C2H9	113 aa	Known RBP	5.06	□□□□□ -1.6
VTC2	YFL004W	CKA1	P15790	372 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	NTH1	P32356	751 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	DAL3	P32459	195 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	RPD3	P32561	433 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	SUR1	P33300	382 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	LRP1	P38801	184 aa	Known RBP	5.06	□□□□□ -1.6
VTC2	YFL004W	ARO9	P38840	513 aa	Predicted RBP	5.06	□□□□□ -1.6
VTC2	YFL004W	EAF5	P39995	279 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	OPT1	P40897	799 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	CAT5	P41735	233 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	POP1	P41812	875 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	QRI7	P43122	407 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	RMD8	P43620	662 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	SOL1	P50278	321 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	KTR6	P54070	446 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	NUP100	Q02629	959 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	YPR127W	Q06494	345 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	GUD1	Q07729	489 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	YDL176W	Q12027	708 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	BSC1	Q12140	328 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	NDJ1	Q12366	352 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	ICT1	Q12385	394 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	MEX67	Q99257	599 aa	Known RBP	5.06	□□□□□ -1.6
VTC2	YFL004W	PMA1	P05030	918 aa	Known RBP	5.06	□□□□□ -1.6
VTC2	YFL004W	ADH3	P07246	375 aa	Known RBP	5.06	□□□□□ -1.6
VTC2	YFL004W	AMD1	P15274	810 aa	Known RBP	5.06	□□□□□ -1.6
VTC2	YFL004W	SEC17	P32602	292 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	MTC2	P34246	357 aa		5.06	□□□□□ -1.6
VTC2	YFL004W	AIM29	P36154	155 aa		5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms