RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C MED8P38304 223 aa1.65□□□□□ -2.15
SMB1YER029C CAX4P53223 239 aa1.65□□□□□ -2.15
SMB1YER029C MRX9Q07349 420 aaKnown RBP1.65□□□□□ -2.15
SMB1YER029C YLR012CQ07927 99 aa1.65□□□□□ -2.15
SMB1YER029C PSY3Q12318 242 aa1.65□□□□□ -2.15
SMB1YER029C YLL053CP0CD98 152 aa1.64□□□□□ -2.15
SMB1YER029C CDC42P19073 191 aa1.64□□□□□ -2.15
SMB1YER029C MIG1P27705 504 aa1.64□□□□□ -2.15
SMB1YER029C ARO4P32449 370 aaKnown RBP1.64□□□□□ -2.15
SMB1YER029C SMI1P32566 505 aa1.64□□□□□ -2.15
SMB1YER029C YEL043WP32618 956 aa1.64□□□□□ -2.15
SMB1YER029C KTI12P34253 313 aaKnown RBP1.64□□□□□ -2.15
SMB1YER029C CTM1P38818 585 aa1.64□□□□□ -2.15
SMB1YER029C LIN1P38852 340 aaPredicted RBP1.64□□□□□ -2.15
SMB1YER029C PET8P38921 284 aa1.64□□□□□ -2.15
SMB1YER029C NAS2P40555 220 aa1.64□□□□□ -2.15
SMB1YER029C FYV8P46949 817 aaKnown RBP1.64□□□□□ -2.15
SMB1YER029C HIT1P46973 164 aa1.64□□□□□ -2.15
SMB1YER029C HSH155P49955 971 aaKnown RBP1.64□□□□□ -2.15
SMB1YER029C TAF6P53040 516 aa1.64□□□□□ -2.15
SMB1YER029C YGL118CP53132 145 aa1.64□□□□□ -2.15
SMB1YER029C HCH1P53834 153 aa1.64□□□□□ -2.15
SMB1YER029C YNL040WP53960 456 aaPredicted RBP1.64□□□□□ -2.15
SMB1YER029C YPL113CQ02961 396 aa1.64□□□□□ -2.15
SMB1YER029C YDR286CQ05530 114 aa1.64□□□□□ -2.15
SMB1YER029C YDR262WQ12331 272 aa1.64□□□□□ -2.15
SMB1YER029C TFC7Q12415 435 aa1.64□□□□□ -2.15
SMB1YER029C RGS2Q99188 309 aa1.64□□□□□ -2.15
SMB1YER029C TAL1P15019 335 aaKnown RBP1.63□□□□□ -2.15
SMB1YER029C HPR1P17629 752 aaKnown RBP1.63□□□□□ -2.15
SMB1YER029C OPI1P21957 404 aa1.63□□□□□ -2.15
SMB1YER029C MRPL20P22354 195 aaPredicted RBP1.63□□□□□ -2.15
SMB1YER029C ASP1P38986 381 aaPredicted RBP1.63□□□□□ -2.15
SMB1YER029C YIL054WP40524 105 aa1.63□□□□□ -2.15
SMB1YER029C YFR045WP43617 309 aa1.63□□□□□ -2.15
SMB1YER029C ASG7P46993 209 aa1.63□□□□□ -2.15
SMB1YER029C SHE4P51534 789 aa1.63□□□□□ -2.15
SMB1YER029C YGR016WP53209 190 aa1.63□□□□□ -2.15
SMB1YER029C UBX2Q04228 584 aa1.63□□□□□ -2.15
SMB1YER029C CSI1Q04368 295 aa1.63□□□□□ -2.15
SMB1YER029C DXO1Q06349 442 aa1.63□□□□□ -2.15
SMB1YER029C YPR096CO13587 100 aa1.62□□□□□ -2.15
SMB1YER029C RBK1P25332 333 aa1.62□□□□□ -2.15
SMB1YER029C UFD1P53044 361 aa1.62□□□□□ -2.15
SMB1YER029C YGL114WP53134 725 aa1.62□□□□□ -2.15
SMB1YER029C YGL088WP53151 121 aa1.62□□□□□ -2.15
SMB1YER029C YNR066CP53752 436 aa1.62□□□□□ -2.15
SMB1YER029C YNL146WP53906 100 aa1.62□□□□□ -2.15
SMB1YER029C STE23Q06010 1027 aa1.62□□□□□ -2.15
SMB1YER029C DTD1Q07648 150 aaKnown RBP1.62□□□□□ -2.15
SMB1YER029C YPR063CQ12160 140 aa1.62□□□□□ -2.15
SMB1YER029C CBP2P03874 630 aaPredicted RBP1.61□□□□□ -2.15
SMB1YER029C MET2P08465 486 aa1.61□□□□□ -2.15
SMB1YER029C PRE7P23724 241 aaKnown RBP1.61□□□□□ -2.15
SMB1YER029C ITR2P30606 609 aa1.61□□□□□ -2.15
SMB1YER029C MEI5P32489 222 aa1.61□□□□□ -2.15
SMB1YER029C UTR5P32630 166 aa1.61□□□□□ -2.15
SMB1YER029C PPQ1P32945 549 aa1.61□□□□□ -2.15
SMB1YER029C GPX1P36014 167 aa1.61□□□□□ -2.15
SMB1YER029C UIP5P36137 443 aa1.61□□□□□ -2.15
SMB1YER029C CAJ1P39101 391 aa1.61□□□□□ -2.15
SMB1YER029C SCC4P40090 624 aa1.61□□□□□ -2.15
SMB1YER029C RVB1Q03940 463 aaKnown RBP1.61□□□□□ -2.15
SMB1YER029C PGC1Q08959 321 aa1.61□□□□□ -2.15
SMB1YER029C YPL245WQ12179 454 aaKnown RBP1.61□□□□□ -2.15
SMB1YER029C ERP3Q12403 225 aa1.61□□□□□ -2.15
SMB1YER029C YAL063C-AQ3E791 96 aa1.61□□□□□ -2.15
SMB1YER029C BEM2P39960 2167 aaKnown RBP1.6□□□□□ -2.15
SMB1YER029C KRE1P17260 313 aa1.6□□□□□ -2.15
SMB1YER029C ACB1P31787 87 aa1.6□□□□□ -2.15
SMB1YER029C VPH2P32341 215 aa1.6□□□□□ -2.15
SMB1YER029C YKL162CP36052 402 aa1.6□□□□□ -2.15
SMB1YER029C YBR062CP38239 180 aa1.6□□□□□ -2.15
SMB1YER029C SOP4P39543 234 aaPredicted RBP1.6□□□□□ -2.15
SMB1YER029C YER084WP40057 128 aa1.6□□□□□ -2.15
SMB1YER029C INA22P40576 216 aa1.6□□□□□ -2.15
SMB1YER029C SEC13Q04491 297 aaKnown RBP1.6□□□□□ -2.15
SMB1YER029C CLP1Q08685 445 aaPredicted RBP1.6□□□□□ -2.15
SMB1YER029C RNR2P09938 399 aaKnown RBP1.59□□□□□ -2.15
SMB1YER029C TPM1P17536 199 aaKnown RBP1.59□□□□□ -2.15
SMB1YER029C SUR1P33300 382 aa1.59□□□□□ -2.15
SMB1YER029C YHL044WP38727 235 aa1.59□□□□□ -2.15
SMB1YER029C YOR292CQ08743 309 aa1.59□□□□□ -2.15
SMB1YER029C TRX1P22217 103 aaKnown RBP1.58□□□□□ -2.16
SMB1YER029C YCR025CP25352 136 aa1.58□□□□□ -2.16
SMB1YER029C CSE1P33307 960 aa1.58□□□□□ -2.16
SMB1YER029C EDC2P40023 145 aaPredicted RBP1.58□□□□□ -2.16
SMB1YER029C PCL7P40186 285 aa1.58□□□□□ -2.16
SMB1YER029C BUD13P46947 266 aaPredicted RBP1.58□□□□□ -2.16
SMB1YER029C MIX17Q03667 156 aa1.58□□□□□ -2.16
SMB1YER029C BUR2Q05949 395 aa1.58□□□□□ -2.16
SMB1YER029C RLP24Q07915 199 aaKnown RBP1.58□□□□□ -2.16
SMB1YER029C FEX1Q08913 375 aa1.58□□□□□ -2.16
SMB1YER029C FEX2Q08991 375 aa1.58□□□□□ -2.16
SMB1YER029C GAL3P13045 520 aa1.57□□□□□ -2.16
SMB1YER029C MSS116P15424 664 aaKnown RBP1.57□□□□□ -2.16
SMB1YER029C VMA5P31412 392 aaKnown RBP1.57□□□□□ -2.16
SMB1YER029C AIM29P36154 155 aa1.57□□□□□ -2.16
SMB1YER029C ECO1P43605 281 aa1.57□□□□□ -2.16
SMB1YER029C YGR168CP53293 376 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms