RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	PPT1	P53043	513 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	HAS1	Q03532	505 aa	Known RBP	5.64	□□□□□ -1.51
CDC1	YDR182W	YDR102C	Q03864	110 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	PSR1	Q07800	427 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	COQ10	Q08058	207 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	HRT1	Q08273	121 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	HMS1	Q12398	434 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	ADF1	Q2V2Q1	113 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	MCM10	P32354	571 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	YKL077W	P36081	392 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	SRO77	P38163	1010 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	YBR220C	P38318	560 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	RPP1	P38786	293 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	PEX18	P38855	283 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	FET3	P38993	636 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	CIN4	P39110	191 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	SWD1	P39706	426 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	YIL166C	P40445	542 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	NOP9	P47077	666 aa	Known RBP	5.64	□□□□□ -1.51
CDC1	YDR182W	ACS1	Q01574	713 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	SPR6	Q01684	191 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	SSY1	Q03770	852 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	ACL4	Q03771	387 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	RSM24	Q03976	319 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	UTP21	Q06078	939 aa	Predicted RBP	5.64	□□□□□ -1.51
CDC1	YDR182W	RSC58	Q07979	502 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	NIP7	Q08962	181 aa	Known RBP	5.64	□□□□□ -1.51
CDC1	YDR182W	MHF1	Q3E835	90 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	YHR214C-E	Q8TGK0	99 aa		5.64	□□□□□ -1.51
CDC1	YDR182W	SEC12	P11655	471 aa		5.63	□□□□□ -1.51
CDC1	YDR182W	NUP1	P20676	1076 aa		5.63	□□□□□ -1.51
CDC1	YDR182W	PWP1	P21304	576 aa	Known RBP	5.63	□□□□□ -1.51
CDC1	YDR182W	GIT1	P25346	518 aa		5.63	□□□□□ -1.51
CDC1	YDR182W	PRE2	P30656	287 aa	Known RBP	5.63	□□□□□ -1.51
CDC1	YDR182W	DBF20	P32328	564 aa		5.63	□□□□□ -1.51
CDC1	YDR182W	TRS65	P32893	560 aa		5.63	□□□□□ -1.51
CDC1	YDR182W	ECM15	P35195	104 aa		5.63	□□□□□ -1.51
CDC1	YDR182W	GPX1	P36014	167 aa		5.63	□□□□□ -1.51
CDC1	YDR182W	RCY1	P39531	840 aa		5.63	□□□□□ -1.51
CDC1	YDR182W	BAT2	P47176	376 aa	Known RBP	5.63	□□□□□ -1.51
CDC1	YDR182W	MPP6	P53725	186 aa	Predicted RBP	5.63	□□□□□ -1.51
CDC1	YDR182W	TEX1	P53851	422 aa	Known RBP	5.63	□□□□□ -1.51
CDC1	YDR182W	MRPL19	P53875	158 aa		5.63	□□□□□ -1.51
CDC1	YDR182W	YAP6	Q03935	383 aa		5.63	□□□□□ -1.51
CDC1	YDR182W	SPC2	Q04969	178 aa		5.63	□□□□□ -1.51
CDC1	YDR182W	RTC5	Q12108	567 aa	Known RBP	5.63	□□□□□ -1.51
CDC1	YDR182W	RNH203	Q12338	110 aa		5.63	□□□□□ -1.51
CDC1	YDR182W	RTN2	Q12443	393 aa		5.63	□□□□□ -1.51
CDC1	YDR182W	YOL162W	P0CF19	215 aa		5.62	□□□□□ -1.51
CDC1	YDR182W	PRP28	P23394	588 aa		5.62	□□□□□ -1.51
CDC1	YDR182W	SPC29	P33419	253 aa		5.62	□□□□□ -1.51
CDC1	YDR182W	VHR1	P40522	640 aa		5.62	□□□□□ -1.51
CDC1	YDR182W	YIL012W	P40551	113 aa		5.62	□□□□□ -1.51
CDC1	YDR182W	YGL235W	P53071	178 aa		5.62	□□□□□ -1.51
CDC1	YDR182W	MAL12	P53341	584 aa		5.62	□□□□□ -1.51
CDC1	YDR182W	GTR1	Q00582	310 aa		5.62	□□□□□ -1.51
CDC1	YDR182W	RRN5	Q02983	363 aa		5.62	□□□□□ -1.51
CDC1	YDR182W	RCE1	Q03530	315 aa		5.62	□□□□□ -1.51
CDC1	YDR182W	DML1	Q03652	475 aa		5.62	□□□□□ -1.51
CDC1	YDR182W	HFD1	Q04458	532 aa		5.62	□□□□□ -1.51
CDC1	YDR182W	CTS2	Q06350	511 aa		5.62	□□□□□ -1.51
CDC1	YDR182W	YPR127W	Q06494	345 aa		5.62	□□□□□ -1.51
CDC1	YDR182W	PRB1	P09232	635 aa		5.61	□□□□□ -1.51
CDC1	YDR182W	RPL35A	P0CX84	120 aa	Known RBP	5.61	□□□□□ -1.51
CDC1	YDR182W	RPL35B	P0CX85	120 aa	Known RBP	5.61	□□□□□ -1.51
CDC1	YDR182W	EXG1	P23776	448 aa	Known RBP	5.61	□□□□□ -1.51
CDC1	YDR182W	PPA2	P28239	310 aa		5.61	□□□□□ -1.51
CDC1	YDR182W	THI4	P32318	326 aa		5.61	□□□□□ -1.51
CDC1	YDR182W	DPH5	P32469	300 aa	Predicted RBP	5.61	□□□□□ -1.51
CDC1	YDR182W	PPG1	P32838	368 aa		5.61	□□□□□ -1.51
CDC1	YDR182W	YKL071W	P36086	256 aa		5.61	□□□□□ -1.51
CDC1	YDR182W	PDX3	P38075	228 aa	Known RBP	5.61	□□□□□ -1.51
CDC1	YDR182W	ALP1	P38971	573 aa		5.61	□□□□□ -1.51
CDC1	YDR182W	RBG1	P39729	369 aa		5.61	□□□□□ -1.51
CDC1	YDR182W	ISC1	P40015	477 aa	Known RBP	5.61	□□□□□ -1.51
CDC1	YDR182W	YER084W	P40057	128 aa		5.61	□□□□□ -1.51
CDC1	YDR182W	YNL095C	P53932	642 aa		5.61	□□□□□ -1.51
CDC1	YDR182W	SEC13	Q04491	297 aa	Known RBP	5.61	□□□□□ -1.51
CDC1	YDR182W	SNO4	Q04902	237 aa		5.61	□□□□□ -1.51
CDC1	YDR182W	PML1	Q07930	204 aa	Predicted RBP	5.61	□□□□□ -1.51
CDC1	YDR182W	HSP33	Q08914	237 aa	Known RBP	5.61	□□□□□ -1.51
CDC1	YDR182W	HSP32	Q08992	237 aa		5.61	□□□□□ -1.51
CDC1	YDR182W	WHI5	Q12416	295 aa		5.61	□□□□□ -1.51
CDC1	YDR182W	RPS16A	P0CX51	143 aa	Known RBP	5.6	□□□□□ -1.51
CDC1	YDR182W	RPS16B	P0CX52	143 aa	Known RBP	5.6	□□□□□ -1.51
CDC1	YDR182W	PUP2	P32379	260 aa		5.6	□□□□□ -1.51
CDC1	YDR182W	MSN4	P33749	630 aa		5.6	□□□□□ -1.51
CDC1	YDR182W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.6	□□□□□ -1.51	not detected
CDC1	YDR182W	GDI1	P39958	451 aa	Known RBP	5.6	□□□□□ -1.51
CDC1	YDR182W	DPB11	P47027	764 aa	Predicted RBP	5.6	□□□□□ -1.51
CDC1	YDR182W	SIP18	P50263	79 aa		5.6	□□□□□ -1.51
CDC1	YDR182W	DSL1	P53847	754 aa		5.6	□□□□□ -1.51
CDC1	YDR182W	MOT3	P54785	490 aa	Known RBP	5.6	□□□□□ -1.51
CDC1	YDR182W	RSM28	Q03430	361 aa		5.6	□□□□□ -1.51
CDC1	YDR182W	SPC24	Q04477	213 aa		5.6	□□□□□ -1.51
CDC1	YDR182W	THI72	Q08579	599 aa		5.6	□□□□□ -1.51
CDC1	YDR182W	SPC3	Q12133	184 aa		5.6	□□□□□ -1.51
CDC1	YDR182W	RPC40	P07703	335 aa	Known RBP	5.59	□□□□□ -1.51
CDC1	YDR182W	SED4	P25365	1065 aa		5.59	□□□□□ -1.51
CDC1	YDR182W	TFC1	P32367	649 aa		5.59	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms