RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	SNL1	P40548	159 aa		5.15	□□□□□ -1.59
ATG12	YBR217W	MON1	P53129	644 aa		5.15	□□□□□ -1.59
ATG12	YBR217W	YGL101W	P53144	215 aa		5.15	□□□□□ -1.59
ATG12	YBR217W	MRP51	Q02950	344 aa		5.15	□□□□□ -1.59
ATG12	YBR217W	YMR099C	Q03161	297 aa	Known RBP	5.15	□□□□□ -1.59
ATG12	YBR217W	RSM24	Q03976	319 aa		5.15	□□□□□ -1.59
ATG12	YBR217W	AGE1	Q04412	482 aa		5.15	□□□□□ -1.59
ATG12	YBR217W	MRPL1	Q04599	285 aa		5.15	□□□□□ -1.59
ATG12	YBR217W	EMG1	Q06287	252 aa	Known RBP	5.15	□□□□□ -1.59
ATG12	YBR217W	RAF1	Q06891	181 aa		5.15	□□□□□ -1.59
ATG12	YBR217W	UIP4	Q08926	304 aa		5.15	□□□□□ -1.59
ATG12	YBR217W	MED2	Q12124	431 aa		5.15	□□□□□ -1.59
ATG12	YBR217W	SET6	Q12529	373 aa		5.15	□□□□□ -1.59
ATG12	YBR217W	HEM4	P06174	275 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	SPS100	P13130	326 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	DPM1	P14020	267 aa	Known RBP	5.14	□□□□□ -1.59
ATG12	YBR217W	HAP4	P14064	554 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	ATG15	P25641	520 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	THI4	P32318	326 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
ATG12	YBR217W	NIC96	P34077	839 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	MRPL39	P36533	70 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	AIM3	P38266	947 aa	Known RBP	5.14	□□□□□ -1.59
ATG12	YBR217W	YBR138C	P38277	524 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	GPP1	P41277	250 aa	Known RBP	5.14	□□□□□ -1.59
ATG12	YBR217W	STB1	P42845	420 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	CHA4	P43634	648 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	IDS2	P46958	469 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	YJR098C	P47139	656 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	MKC7	P53379	596 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	RRN9	P53437	365 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	TFB3	Q03290	321 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	SMP3	Q04174	516 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	NIP7	Q08962	181 aa	Known RBP	5.14	□□□□□ -1.59
ATG12	YBR217W	YDL180W	Q12301	547 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	HMS1	Q12398	434 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	YHR214C-E	Q8TGK0	99 aa		5.14	□□□□□ -1.59
ATG12	YBR217W	CDC36	P06100	191 aa	Predicted RBP	5.13	□□□□□ -1.59
ATG12	YBR217W	MET2	P08465	486 aa		5.13	□□□□□ -1.59
ATG12	YBR217W	RPI1	P23250	407 aa	Known RBP	5.13	□□□□□ -1.59
ATG12	YBR217W	CPR2	P23285	205 aa		5.13	□□□□□ -1.59
ATG12	YBR217W	PPA2	P28239	310 aa		5.13	□□□□□ -1.59
ATG12	YBR217W	RPC82	P32349	654 aa		5.13	□□□□□ -1.59
ATG12	YBR217W	ECM8	P38246	354 aa		5.13	□□□□□ -1.59
ATG12	YBR217W	CHL4	P38907	458 aa		5.13	□□□□□ -1.59
ATG12	YBR217W	SEN34	P39707	275 aa		5.13	□□□□□ -1.59
ATG12	YBR217W	ISC1	P40015	477 aa	Known RBP	5.13	□□□□□ -1.59
ATG12	YBR217W	RRG9	P40156	214 aa		5.13	□□□□□ -1.59
ATG12	YBR217W	IDP2	P41939	412 aa		5.13	□□□□□ -1.59
ATG12	YBR217W	SWP82	P43554	623 aa		5.13	□□□□□ -1.59
ATG12	YBR217W	MDE1	P47095	244 aa		5.13	□□□□□ -1.59
ATG12	YBR217W	ELA1	P53861	379 aa	Predicted RBP	5.13	□□□□□ -1.59
ATG12	YBR217W	HOT1	Q03213	719 aa		5.13	□□□□□ -1.59
ATG12	YBR217W	OST6	Q03723	332 aa		5.13	□□□□□ -1.59
ATG12	YBR217W	YDR102C	Q03864	110 aa		5.13	□□□□□ -1.59
ATG12	YBR217W	ELP6	Q04868	273 aa		5.13	□□□□□ -1.59
ATG12	YBR217W	CTS2	Q06350	511 aa		5.13	□□□□□ -1.59
ATG12	YBR217W	TPK3	P05986	398 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	SEC12	P11655	471 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	SAM35	P14693	329 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	GIT1	P25346	518 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	VPH2	P32341	215 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	YBR063C	P38083	404 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	ZRG8	P40021	1076 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	YFL051C	P43552	160 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	SAM37	P50110	327 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	EXG2	P52911	562 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	PCP1	P53259	346 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	PGA1	P53896	198 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	GRX5	Q02784	150 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	YMD8	Q03697	442 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	YAP6	Q03935	383 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	RSA3	Q05942	220 aa	Known RBP	5.12	□□□□□ -1.59
ATG12	YBR217W	YPR097W	Q06839	1073 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	TAF3	Q12297	353 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	YPL119C-A	Q3E751	87 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	MHF1	Q3E835	90 aa		5.12	□□□□□ -1.59
ATG12	YBR217W	NFT1	P0CE68	1218 aa		5.11	□□□□□ -1.59
ATG12	YBR217W	YCL002C	P25565	263 aa		5.11	□□□□□ -1.59
ATG12	YBR217W	CAM1	P29547	415 aa	Known RBP	5.11	□□□□□ -1.59
ATG12	YBR217W	OAC1	P32332	324 aa		5.11	□□□□□ -1.59
ATG12	YBR217W	YHL037C	P38733	133 aa		5.11	□□□□□ -1.59
ATG12	YBR217W	MPH1	P40562	993 aa		5.11	□□□□□ -1.59
ATG12	YBR217W	SSY5	P47002	699 aa		5.11	□□□□□ -1.59
ATG12	YBR217W	VMA10	P48836	114 aa	Known RBP	5.11	□□□□□ -1.59
ATG12	YBR217W	ACS2	P52910	683 aa	Known RBP	5.11	□□□□□ -1.59
ATG12	YBR217W	NUP116	Q02630	1113 aa		5.11	□□□□□ -1.59
ATG12	YBR217W	SNZ1	Q03148	297 aa		5.11	□□□□□ -1.59
ATG12	YBR217W	YLR345W	Q06137	509 aa		5.11	□□□□□ -1.59
ATG12	YBR217W	TAZ1	Q06510	381 aa		5.11	□□□□□ -1.59
ATG12	YBR217W	MIM1	Q08176	113 aa		5.11	□□□□□ -1.59
ATG12	YBR217W	DBP10	Q12389	995 aa	Known RBP	5.11	□□□□□ -1.59
ATG12	YBR217W	RTN2	Q12443	393 aa		5.11	□□□□□ -1.59
ATG12	YBR217W	OPI3	P05375	206 aa		5.1	□□□□□ -1.59
ATG12	YBR217W	RPS16A	P0CX51	143 aa	Known RBP	5.1	□□□□□ -1.59
ATG12	YBR217W	RPS16B	P0CX52	143 aa	Known RBP	5.1	□□□□□ -1.59
ATG12	YBR217W	EXG1	P23776	448 aa	Known RBP	5.1	□□□□□ -1.59
ATG12	YBR217W	PPG1	P32838	368 aa		5.1	□□□□□ -1.59
ATG12	YBR217W	MTR2	P34232	184 aa	Known RBP	5.1	□□□□□ -1.59
ATG12	YBR217W	YBR285W	P38354	144 aa		5.1	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms