RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C YJR112W-AQ3E743 109 aa5.09□□□□□ -1.59
RFA1YAR007C CMC2Q3E7A4 109 aa5.09□□□□□ -1.59
RFA1YAR007C NAM2P11325 894 aa5.09□□□□□ -1.6
RFA1YAR007C ADE1P27616 306 aa5.09□□□□□ -1.6
RFA1YAR007C CPR5P35176 225 aa5.09□□□□□ -1.6
RFA1YAR007C KAE1P36132 386 aa5.09□□□□□ -1.6
RFA1YAR007C ATG8P38182 117 aaRIP-Chip data5.09□□□□□ -1.6not detected
RFA1YAR007C RTS2P40962 232 aa5.09□□□□□ -1.6
RFA1YAR007C AMA1P50082 593 aa5.09□□□□□ -1.6
RFA1YAR007C YGR079WP53249 370 aa5.09□□□□□ -1.6
RFA1YAR007C OKP1P53298 406 aa5.09□□□□□ -1.6
RFA1YAR007C MEP3P53390 489 aa5.09□□□□□ -1.6
RFA1YAR007C MNT4P53745 580 aa5.09□□□□□ -1.6
RFA1YAR007C FRE4P53746 719 aa5.09□□□□□ -1.6
RFA1YAR007C YNL134CP53912 376 aaKnown RBP5.09□□□□□ -1.6
RFA1YAR007C ATG38Q05789 226 aaKnown RBP5.09□□□□□ -1.6
RFA1YAR007C CYK3Q07533 885 aa5.09□□□□□ -1.6
RFA1YAR007C AVO1Q08236 1176 aa5.09□□□□□ -1.6
RFA1YAR007C HTS1P07263 546 aaKnown RBP5.08□□□□□ -1.6
RFA1YAR007C GCD1P09032 578 aaPredicted RBP5.08□□□□□ -1.6
RFA1YAR007C GLK1P17709 500 aaKnown RBP5.08□□□□□ -1.6
RFA1YAR007C MRPL8P22353 238 aa5.08□□□□□ -1.6
RFA1YAR007C MKK1P32490 508 aa5.08□□□□□ -1.6
RFA1YAR007C SCM4P32564 187 aa5.08□□□□□ -1.6
RFA1YAR007C PRP18P33411 251 aaPredicted RBP5.08□□□□□ -1.6
RFA1YAR007C PXA2P34230 853 aa5.08□□□□□ -1.6
RFA1YAR007C MIA40P36046 403 aa5.08□□□□□ -1.6
RFA1YAR007C SRO77P38163 1010 aa5.08□□□□□ -1.6
RFA1YAR007C YBR071WP38243 211 aa5.08□□□□□ -1.6
RFA1YAR007C SOH1P38633 127 aa5.08□□□□□ -1.6
RFA1YAR007C CHL4P38907 458 aa5.08□□□□□ -1.6
RFA1YAR007C AXL2P38928 823 aa5.08□□□□□ -1.6
RFA1YAR007C PIG2P40187 538 aa5.08□□□□□ -1.6
RFA1YAR007C YJR141WP47172 347 aaPredicted RBP5.08□□□□□ -1.6
RFA1YAR007C PRP24P49960 444 aaKnown RBP5.08□□□□□ -1.6
RFA1YAR007C PAU12P53343 120 aa5.08□□□□□ -1.6
RFA1YAR007C FMP41P53889 259 aaKnown RBP5.08□□□□□ -1.6
RFA1YAR007C OCA2P53949 197 aa5.08□□□□□ -1.6
RFA1YAR007C RPL34AP87262 121 aaPredicted RBP5.08□□□□□ -1.6
RFA1YAR007C ARG5,6Q01217 863 aa5.08□□□□□ -1.6
RFA1YAR007C REC102Q02721 264 aa5.08□□□□□ -1.6
RFA1YAR007C SRP1Q02821 542 aaKnown RBP5.08□□□□□ -1.6
RFA1YAR007C PEX25Q02969 394 aa5.08□□□□□ -1.6
RFA1YAR007C TY1A-DR2Q03964 440 aaKnown RBP5.08□□□□□ -1.6
RFA1YAR007C CAC2Q04199 468 aa5.08□□□□□ -1.6
RFA1YAR007C UTP15Q04305 513 aaKnown RBP5.08□□□□□ -1.6
RFA1YAR007C RRI1Q12468 440 aa5.08□□□□□ -1.6
RFA1YAR007C SOD2P00447 233 aa5.07□□□□□ -1.6
RFA1YAR007C PUT1P09368 476 aa5.07□□□□□ -1.6
RFA1YAR007C HOM3P10869 527 aa5.07□□□□□ -1.6
RFA1YAR007C ZRC1P20107 442 aa5.07□□□□□ -1.6
RFA1YAR007C APN1P22936 367 aa5.07□□□□□ -1.6
RFA1YAR007C SLM5P25345 492 aaKnown RBP5.07□□□□□ -1.6
RFA1YAR007C TRX3P25372 127 aa5.07□□□□□ -1.6
RFA1YAR007C MGR1P25573 417 aa5.07□□□□□ -1.6
RFA1YAR007C ITR1P30605 584 aa5.07□□□□□ -1.6
RFA1YAR007C ATS1P31386 333 aa5.07□□□□□ -1.6
RFA1YAR007C HXT4P32467 576 aa5.07□□□□□ -1.6
RFA1YAR007C PPG1P32838 368 aa5.07□□□□□ -1.6
RFA1YAR007C SSS1P35179 80 aa5.07□□□□□ -1.6
RFA1YAR007C SFK1P35735 353 aa5.07□□□□□ -1.6
RFA1YAR007C SOL2P37262 315 aa5.07□□□□□ -1.6
RFA1YAR007C CBP4P37267 147 aa5.07□□□□□ -1.6
RFA1YAR007C THI2P38141 450 aa5.07□□□□□ -1.6
RFA1YAR007C PNT1P38969 423 aa5.07□□□□□ -1.6
RFA1YAR007C ASP1P38986 381 aaPredicted RBP5.07□□□□□ -1.6
RFA1YAR007C PZF1P39933 429 aa5.07□□□□□ -1.6
RFA1YAR007C FAA4P47912 694 aaKnown RBP5.07□□□□□ -1.6
RFA1YAR007C ERV14P53173 138 aa5.07□□□□□ -1.6
RFA1YAR007C YGR015CP53208 328 aa5.07□□□□□ -1.6
RFA1YAR007C YNR065CP53751 1116 aa5.07□□□□□ -1.6
RFA1YAR007C CSL4P53859 292 aaPredicted RBP5.07□□□□□ -1.6
RFA1YAR007C LAP3Q01532 483 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
RFA1YAR007C MEH1Q02205 184 aa5.07□□□□□ -1.6
RFA1YAR007C MRI1Q06489 411 aaKnown RBP5.07□□□□□ -1.6
RFA1YAR007C RAD28Q12021 506 aa5.07□□□□□ -1.6
RFA1YAR007C RRP42Q12277 265 aaPredicted RBP5.07□□□□□ -1.6
RFA1YAR007C KIN28P06242 306 aa5.07□□□□□ -1.6
RFA1YAR007C CDC34P14682 295 aa5.07□□□□□ -1.6
RFA1YAR007C RPB3P16370 318 aaKnown RBP5.07□□□□□ -1.6
RFA1YAR007C DOA4P32571 926 aa5.07□□□□□ -1.6
RFA1YAR007C MSN4P33749 630 aa5.07□□□□□ -1.6
RFA1YAR007C YNK1P36010 153 aaKnown RBP5.07□□□□□ -1.6
RFA1YAR007C DTR1P38125 572 aa5.07□□□□□ -1.6
RFA1YAR007C RPS20P38701 121 aaKnown RBP5.07□□□□□ -1.6
RFA1YAR007C ARO9P38840 513 aaPredicted RBP5.07□□□□□ -1.6
RFA1YAR007C LNP1P38878 278 aa5.07□□□□□ -1.6
RFA1YAR007C TIM17P39515 158 aa5.07□□□□□ -1.6
RFA1YAR007C LSM4P40070 187 aaKnown RBP5.07□□□□□ -1.6
RFA1YAR007C TOK1P40310 691 aa5.07□□□□□ -1.6
RFA1YAR007C POG1P40473 351 aa5.07□□□□□ -1.6
RFA1YAR007C MET28P40573 187 aa5.07□□□□□ -1.6
RFA1YAR007C AGX1P43567 385 aa5.07□□□□□ -1.6
RFA1YAR007C SPO74P45819 413 aa5.07□□□□□ -1.6
RFA1YAR007C TAX4P47030 604 aa5.07□□□□□ -1.6
RFA1YAR007C VPS25P47142 202 aa5.07□□□□□ -1.6
RFA1YAR007C OCA1P50946 238 aaPredicted RBP5.07□□□□□ -1.6
RFA1YAR007C PGA1P53896 198 aa5.07□□□□□ -1.6
RFA1YAR007C YPL108WQ02872 168 aaPredicted RBP5.07□□□□□ -1.6
RFA1YAR007C TPP1Q03796 238 aa5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms