RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 CYP4F22Q6NT55 531 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 CCDC137Q6PK04 289 aaKnown RBP14.8□□□□□ -0.04
SCARB2-227ENST00000640957 TAB3Q8N5C8 712 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-227ENST00000640957 C9orf72Q96LT7 481 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 C6orf50Q9HD87 102 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 CTTNBP2NLQ9P2B4 639 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 SPATA31A1Q5TZJ5 1347 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 DDX60Q8IY21 1712 aaKnown RBP14.8□□□□□ -0.04
SCARB2-227ENST00000640957 USP17L5A8MUK1 530 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 RIPK2O43353 540 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 UBTFL6P0CB48 400 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-227ENST00000640957 TRIM49P0CI25 452 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 TRIM49CP0CI26 452 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 CCDC6Q16204 474 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 RFWD3Q6PCD5 774 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 INTS8Q75QN2 995 aaKnown RBP14.8□□□□□ -0.04
SCARB2-227ENST00000640957 KIAA1683Q9H0B3 1180 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 SLITRK6Q9H5Y7 841 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 AIPL1Q9NZN9 384 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 COG5Q9UP83 839 aa14.8□□□□□ -0.04
SCARB2-227ENST00000640957 AKAP3O75969 853 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 GSTA1P08263 222 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 DLATP10515 647 aaKnown RBP14.79□□□□□ -0.04
SCARB2-227ENST00000640957 EIF3BP55884 814 aaKnown RBP14.79□□□□□ -0.04
SCARB2-227ENST00000640957 RIPK1Q13546 671 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 CGB2Q6NT52 195 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 P3H4Q92791 437 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 ARHGEF1Q92888 912 aaKnown RBP14.79□□□□□ -0.04
SCARB2-227ENST00000640957 DNAJC19Q96DA6 116 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 BRIP1Q9BX63 1249 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 PITPNM3Q9BZ71 974 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 CUEDC2Q9H467 287 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 GRHL1Q9NZI5 618 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 DCTN4Q9UJW0 460 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 SPEF2Q9C093 1822 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 CALCAP01258 141 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 PTDSS1P48651 473 aaKnown RBP14.79□□□□□ -0.04
SCARB2-227ENST00000640957 ZNF131P52739 623 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 POU5F1Q01860 360 aaKnown RBP14.79□□□□□ -0.04
SCARB2-227ENST00000640957 LAMB3Q13751 1172 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 C6orf118Q5T5N4 469 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 ZC3H18Q86VM9 953 aaKnown RBP14.79□□□□□ -0.04
SCARB2-227ENST00000640957 IFT74Q96LB3 600 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 AK8Q96MA6 479 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 EYA3Q99504 573 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 ARHGEF3Q9NR81 526 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 BMP2KQ9NSY1 1161 aaPredicted RBP14.79□□□□□ -0.04
SCARB2-227ENST00000640957 ASIC3Q9UHC3 531 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 SIPA1L3O60292 1781 aaPredicted RBP14.79□□□□□ -0.04
SCARB2-227ENST00000640957 TJP1Q07157 1748 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 DCCP43146 1447 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 SMAPO00193 183 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 XRCC5P13010 732 aaKnown RBP14.79□□□□□ -0.04
SCARB2-227ENST00000640957 SCNN1DP51172 638 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 RCN2Q14257 317 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 CCHCR1Q8TD31 782 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 CDC42EP4Q9H3Q1 356 aaKnown RBP14.79□□□□□ -0.04
SCARB2-227ENST00000640957 OCEL1Q9H607 264 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 USH1CQ9Y6N9 552 aa14.79□□□□□ -0.04
SCARB2-227ENST00000640957 KIF1AQ12756 1690 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 SRRM3A6NNA2 597 aaPredicted RBP14.78□□□□□ -0.04
SCARB2-227ENST00000640957 CETPP11597 493 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 FOXN2P32314 431 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 OVGP1Q12889 678 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 MAPK7Q13164 816 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 C2CD6Q53TS8 623 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 VSTM1Q6UX27 236 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 PRELID2Q8N945 189 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 FAM13CQ8NE31 585 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 ARL2BPQ9Y2Y0 163 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 TNS2Q63HR2 1409 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 ALS2Q96Q42 1657 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 GJC1P36383 396 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 PTENP60484 403 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 SNAP25P60880 206 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 IFI16Q16666 785 aaKnown RBP14.78□□□□□ -0.04
SCARB2-227ENST00000640957 KRT25Q7Z3Z0 450 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 SLC20A1Q8WUM9 679 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 TRIM4Q9C037 500 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 HOMER3Q9NSC5 361 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 ATP8A2Q9NTI2 1148 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 ALG6Q9Y672 507 aa14.78□□□□□ -0.04
SCARB2-227ENST00000640957 GSTTP1A0A1W2PQM5 241 aa14.77□□□□□ -0.04
SCARB2-227ENST00000640957 A6NHS1 94 aa14.77□□□□□ -0.04
SCARB2-227ENST00000640957 FAM196BA6NMK8 535 aa14.77□□□□□ -0.04
SCARB2-227ENST00000640957 ZBTB48P10074 688 aaPredicted RBP14.77□□□□□ -0.04
SCARB2-227ENST00000640957 BTDP43251 543 aa14.77□□□□□ -0.04
SCARB2-227ENST00000640957 ZCWPW2Q504Y3 356 aa14.77□□□□□ -0.04
SCARB2-227ENST00000640957 C4orf33Q8N1A6 199 aa14.77□□□□□ -0.04
SCARB2-227ENST00000640957 EPAS1Q99814 870 aa14.77□□□□□ -0.04
SCARB2-227ENST00000640957 PVALEFA0A1B0GWK0 134 aa14.77□□□□□ -0.04
SCARB2-227ENST00000640957 A0A1W2PRG0 241 aa14.77□□□□□ -0.04
SCARB2-227ENST00000640957 DDX3YO15523 660 aaKnown RBP14.77□□□□□ -0.04
SCARB2-227ENST00000640957 PLA2G4BP0C869 781 aa14.77□□□□□ -0.04
SCARB2-227ENST00000640957 COG2Q14746 738 aa14.77□□□□□ -0.04
SCARB2-227ENST00000640957 TMED2Q15363 201 aa14.77□□□□□ -0.04
SCARB2-227ENST00000640957 CERKLQ49MI3 558 aaPredicted RBP14.77□□□□□ -0.04
SCARB2-227ENST00000640957 VPS36Q86VN1 386 aa14.77□□□□□ -0.04
SCARB2-227ENST00000640957 PIGOQ8TEQ8 1089 aa14.77□□□□□ -0.04
SCARB2-227ENST00000640957 CNKSR1Q969H4 720 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms