RNA–Protein interactions for RNA: ENST00000638140.1

EFHC1-239, Transcript of EF-hand domain containing 1, humanhuman

TSL 4

Gene EFHC1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-239ENST00000638140 AGPAT5Q9NUQ2 364 aa13.5□□□□□ -0.25
EFHC1-239ENST00000638140 RNF19AQ9NV58 838 aa13.5□□□□□ -0.25
EFHC1-239ENST00000638140 TYW1Q9NV66 732 aaKnown RBP13.5□□□□□ -0.25
EFHC1-239ENST00000638140 LMCD1Q9NZU5 365 aa13.5□□□□□ -0.25
EFHC1-239ENST00000638140 UNC80Q8N2C7 3258 aa13.49□□□□□ -0.25
EFHC1-239ENST00000638140 LRRIQ4A6NIV6 560 aa13.49□□□□□ -0.25
EFHC1-239ENST00000638140 ERLIN2O94905 339 aa13.49□□□□□ -0.25
EFHC1-239ENST00000638140 EYA4O95677 639 aa13.49□□□□□ -0.25
EFHC1-239ENST00000638140 BMP15O95972 392 aa13.49□□□□□ -0.25
EFHC1-239ENST00000638140 ATF7P17544 494 aaPredicted RBP13.49□□□□□ -0.25
EFHC1-239ENST00000638140 GRIN1Q05586 938 aa13.49□□□□□ -0.25
EFHC1-239ENST00000638140 NCBP1Q09161 790 aaKnown RBP13.49□□□□□ -0.25
EFHC1-239ENST00000638140 SPOUT1Q5T280 376 aaKnown RBP13.49□□□□□ -0.25
EFHC1-239ENST00000638140 LRRC55Q6ZSA7 311 aa13.49□□□□□ -0.25
EFHC1-239ENST00000638140 IFNLR1Q8IU57 520 aaPredicted RBP13.49□□□□□ -0.25
EFHC1-239ENST00000638140 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.49□□□□□ -0.25
EFHC1-239ENST00000638140 LPPQ93052 612 aa13.49□□□□□ -0.25
EFHC1-239ENST00000638140 PNMA5Q96PV4 448 aa13.49□□□□□ -0.25
EFHC1-239ENST00000638140 ALG13Q9NP73 1137 aaKnown RBP13.49□□□□□ -0.25
EFHC1-239ENST00000638140 FAM105AQ9NUU6 356 aa13.49□□□□□ -0.25
EFHC1-239ENST00000638140 HCSTQ9UBK5 93 aa13.49□□□□□ -0.25
EFHC1-239ENST00000638140 PLAGL2Q9UPG8 496 aa13.49□□□□□ -0.25
EFHC1-239ENST00000638140 RWDD3Q9Y3V2 267 aa13.49□□□□□ -0.25
EFHC1-239ENST00000638140 GRM6O15303 877 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 HOXA2O43364 376 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 ZNF623O75123 536 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 SKIP12755 728 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 MARCKSP29966 332 aaPredicted RBP13.48□□□□□ -0.25
EFHC1-239ENST00000638140 MBTD1Q05BQ5 628 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 PTPAQ15257 358 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 SKIV2LQ15477 1246 aaKnown RBP13.48□□□□□ -0.25
EFHC1-239ENST00000638140 CLLU1OSQ5K130 101 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 HYIQ5T013 277 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 FOXD4L5Q5VV16 416 aaPredicted RBP13.48□□□□□ -0.25
EFHC1-239ENST00000638140 RINT1Q6NUQ1 792 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 CABP7Q86V35 215 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 ABI1Q8IZP0 508 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 HELQQ8TDG4 1101 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 FOXD4L4Q8WXT5 416 aaPredicted RBP13.48□□□□□ -0.25
EFHC1-239ENST00000638140 BSNDQ8WZ55 320 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 MRPL38Q96DV4 380 aaKnown RBP13.48□□□□□ -0.25
EFHC1-239ENST00000638140 CPB2Q96IY4 423 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 AK8Q96MA6 479 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 C11orf84Q9BUA3 381 aaPredicted RBP13.48□□□□□ -0.25
EFHC1-239ENST00000638140 PLVAPQ9BX97 442 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 NFKBIZQ9BYH8 718 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 TMEM117Q9H0C3 514 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 ZSCAN16Q9H4T2 348 aaPredicted RBP13.48□□□□□ -0.25
EFHC1-239ENST00000638140 CWH43Q9H720 699 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 PCDHB2Q9Y5E7 798 aa13.48□□□□□ -0.25
EFHC1-239ENST00000638140 MEIS3P2A8K0S8 358 aa13.47□□□□□ -0.25
EFHC1-239ENST00000638140 B4GALT5O43286 388 aa13.47□□□□□ -0.25
EFHC1-239ENST00000638140 TSPAN1O60635 241 aa13.47□□□□□ -0.25
EFHC1-239ENST00000638140 SSBP05455 408 aaKnown RBP eCLIP13.47□□□□□ -0.25
EFHC1-239ENST00000638140 AXLP30530 894 aa13.47□□□□□ -0.25
EFHC1-239ENST00000638140 UBA7P41226 1012 aa13.47□□□□□ -0.25
EFHC1-239ENST00000638140 PCBP1Q15365 356 aaKnown RBP eCLIP13.47□□□□□ -0.25
EFHC1-239ENST00000638140 AMHR2Q16671 573 aa13.47□□□□□ -0.25
EFHC1-239ENST00000638140 PTPROQ16827 1216 aa13.47□□□□□ -0.25
EFHC1-239ENST00000638140 SPECC1Q5M775 1068 aa13.47□□□□□ -0.25
EFHC1-239ENST00000638140 UBXN11Q5T124 520 aa13.47□□□□□ -0.25
EFHC1-239ENST00000638140 C1orf186Q6ZWK4 172 aa13.47□□□□□ -0.25
EFHC1-239ENST00000638140 KLHL23Q8NBE8 558 aa13.47□□□□□ -0.25
EFHC1-239ENST00000638140 CDK5RAP3Q96JB5 506 aa13.47□□□□□ -0.25
EFHC1-239ENST00000638140 NT5C3AQ9H0P0 336 aa13.47□□□□□ -0.25
EFHC1-239ENST00000638140 TFIP11Q9UBB9 837 aaKnown RBP13.47□□□□□ -0.25
EFHC1-239ENST00000638140 COL4A6Q14031 1691 aa13.47□□□□□ -0.25
EFHC1-239ENST00000638140 SFI1A8K8P3 1242 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 HIP1RO75146 1068 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 OFD1O75665 1012 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 ITGB1P05556 798 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 ARF4P18085 180 aaPredicted RBP13.46□□□□□ -0.25
EFHC1-239ENST00000638140 LONP1P36776 959 aaKnown RBP13.46□□□□□ -0.25
EFHC1-239ENST00000638140 NAMPTP43490 491 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 NAALADL2Q58DX5 795 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 NOTUMQ6P988 496 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 USP49Q70CQ1 688 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 MRPL10Q7Z7H8 261 aaKnown RBP13.46□□□□□ -0.25
EFHC1-239ENST00000638140 CDR2LQ86X02 465 aaPredicted RBP13.46□□□□□ -0.25
EFHC1-239ENST00000638140 SYT2Q8N9I0 419 aaPredicted RBP13.46□□□□□ -0.25
EFHC1-239ENST00000638140 DEPTORQ8TB45 409 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 SPPL3Q8TCT6 385 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 KIFAP3Q92845 792 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 P2RX5Q93086 422 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 PGBD4Q96DM1 585 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 EPSTI1Q96J88 318 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 IFT74Q96LB3 600 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 USP28Q96RU2 1077 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 RUSC1Q9BVN2 902 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 EIF2AQ9BY44 585 aaKnown RBP13.46□□□□□ -0.25
EFHC1-239ENST00000638140 CSRNP2Q9H175 543 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 FZD8Q9H461 694 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 AAASQ9NRG9 546 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 USP20Q9Y2K6 914 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 PCDHB12Q9Y5F1 795 aa13.46□□□□□ -0.25
EFHC1-239ENST00000638140 SRPRBQ9Y5M8 271 aaKnown RBP13.46□□□□□ -0.25
EFHC1-239ENST00000638140 PRRC2BQ5JSZ5 2229 aaKnown RBP13.45□□□□□ -0.26
EFHC1-239ENST00000638140 A0A1B0GUA9 196 aa13.45□□□□□ -0.26
EFHC1-239ENST00000638140 TTLL13PA6NNM8 815 aa13.45□□□□□ -0.26
EFHC1-239ENST00000638140 CCDC169A6NNP5 214 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms