RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 VPS16Q9H269 839 aa16.83■□□□□ 0.28
CLN6-219ENST00000637329 DMAC2Q9NW81 257 aa16.83■□□□□ 0.28
CLN6-219ENST00000637329 RRN3P2A6NIE6 340 aa16.82■□□□□ 0.28
CLN6-219ENST00000637329 MAPK13O15264 365 aa16.82■□□□□ 0.28
CLN6-219ENST00000637329 ASAP2O43150 1006 aa16.82■□□□□ 0.28
CLN6-219ENST00000637329 SEPT4O43236 478 aa16.82■□□□□ 0.28
CLN6-219ENST00000637329 FKTNO75072 461 aa16.82■□□□□ 0.28
CLN6-219ENST00000637329 PIGRP01833 764 aa16.82■□□□□ 0.28
CLN6-219ENST00000637329 HMGCRP04035 888 aa16.82■□□□□ 0.28
CLN6-219ENST00000637329 INSRRP14616 1297 aa16.82■□□□□ 0.28
CLN6-219ENST00000637329 CAPSQ13938 189 aa16.82■□□□□ 0.28
CLN6-219ENST00000637329 TFDP1Q14186 410 aa16.82■□□□□ 0.28
CLN6-219ENST00000637329 CCDC186Q7Z3E2 898 aa16.82■□□□□ 0.28
CLN6-219ENST00000637329 LINC01465Q8N7H1 131 aa16.82■□□□□ 0.28
CLN6-219ENST00000637329 CD99L2Q8TCZ2 262 aa16.82■□□□□ 0.28
CLN6-219ENST00000637329 RNPEPQ9H4A4 650 aa16.82■□□□□ 0.28
CLN6-219ENST00000637329 TMEM134Q9H6X4 195 aa16.82■□□□□ 0.28
CLN6-219ENST00000637329 ARMCX3Q9UH62 379 aaPredicted RBP16.82■□□□□ 0.28
CLN6-219ENST00000637329 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.82■□□□□ 0.282e-8■■■□□ 18
CLN6-219ENST00000637329 LRRIQ4A6NIV6 560 aa16.81■□□□□ 0.28
CLN6-219ENST00000637329 KIAA0391O15091 583 aaKnown RBP16.81■□□□□ 0.28
CLN6-219ENST00000637329 TEX33O43247 280 aa16.81■□□□□ 0.28
CLN6-219ENST00000637329 ADCY3O60266 1144 aa16.81■□□□□ 0.28
CLN6-219ENST00000637329 PSMC2P35998 433 aaKnown RBP16.81■□□□□ 0.28
CLN6-219ENST00000637329 GJA9P57773 515 aa16.81■□□□□ 0.28
CLN6-219ENST00000637329 UBXN1Q04323 297 aa16.81■□□□□ 0.28
CLN6-219ENST00000637329 POU5F1BQ06416 359 aa16.81■□□□□ 0.28
CLN6-219ENST00000637329 STRN3Q13033 797 aa16.81■□□□□ 0.28
CLN6-219ENST00000637329 PPFIA1Q13136 1202 aa16.81■□□□□ 0.28
CLN6-219ENST00000637329 TBX2Q13207 712 aaPredicted RBP16.81■□□□□ 0.28
CLN6-219ENST00000637329 FSCN1Q16658 493 aaKnown RBP16.81■□□□□ 0.28
CLN6-219ENST00000637329 VWA3BQ502W6 1294 aa16.81■□□□□ 0.28
CLN6-219ENST00000637329 TRPV1Q8NER1 839 aa16.81■□□□□ 0.28
CLN6-219ENST00000637329 PXYLP1Q8TE99 480 aa16.81■□□□□ 0.28
CLN6-219ENST00000637329 ERGIC2Q96RQ1 377 aa16.81■□□□□ 0.28
CLN6-219ENST00000637329 KIFC3Q9BVG8 833 aa16.81■□□□□ 0.28
CLN6-219ENST00000637329 NFKBIZQ9BYH8 718 aa16.81■□□□□ 0.28
CLN6-219ENST00000637329 NDST4Q9H3R1 872 aa16.81■□□□□ 0.28
CLN6-219ENST00000637329 SPC25Q9HBM1 224 aa16.81■□□□□ 0.28
CLN6-219ENST00000637329 FRMD4BQ9Y2L6 1034 aa16.81■□□□□ 0.28
CLN6-219ENST00000637329 NRCAMQ92823 1304 aa16.8■□□□□ 0.28
CLN6-219ENST00000637329 HAS3O00219 553 aa16.8■□□□□ 0.28
CLN6-219ENST00000637329 AKAP3O75969 853 aa16.8■□□□□ 0.28
CLN6-219ENST00000637329 TPM1P09493 284 aa16.8■□□□□ 0.28
CLN6-219ENST00000637329 TMOD1P28289 359 aa16.8■□□□□ 0.28
CLN6-219ENST00000637329 LAMTOR4Q0VGL1 99 aa16.8■□□□□ 0.28
CLN6-219ENST00000637329 GRIK4Q16099 956 aa16.8■□□□□ 0.28
CLN6-219ENST00000637329 ARMCX5Q6P1M9 558 aa16.8■□□□□ 0.28
CLN6-219ENST00000637329 CREBRFQ8IUR6 639 aa16.8■□□□□ 0.28
CLN6-219ENST00000637329 KSR1Q8IVT5 923 aa16.8■□□□□ 0.28
CLN6-219ENST00000637329 ZBTB8OSQ8IWT0 167 aa16.8■□□□□ 0.28
CLN6-219ENST00000637329 FAM186BQ8IYM0 893 aa16.8■□□□□ 0.28
CLN6-219ENST00000637329 PRPF31Q8WWY3 499 aaKnown RBP16.8■□□□□ 0.28
CLN6-219ENST00000637329 LENG1Q96BZ8 264 aaPredicted RBP16.8■□□□□ 0.28
CLN6-219ENST00000637329 EEF2KMTQ96G04 330 aa16.8■□□□□ 0.28
CLN6-219ENST00000637329 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.8■□□□□ 0.28
CLN6-219ENST00000637329 PES1O00541 588 aaKnown RBP16.79■□□□□ 0.28
CLN6-219ENST00000637329 HNRNPDLO14979 420 aaKnown RBP16.79■□□□□ 0.28
CLN6-219ENST00000637329 CLIC2O15247 247 aa16.79■□□□□ 0.28
CLN6-219ENST00000637329 NRDCO43847 1150 aa16.79■□□□□ 0.28
CLN6-219ENST00000637329 RARBP10826 455 aa16.79■□□□□ 0.28
CLN6-219ENST00000637329 GARTP22102 1010 aa16.79■□□□□ 0.28
CLN6-219ENST00000637329 SFPQP23246 707 aaKnown RBP eCLIP16.79■□□□□ 0.28
CLN6-219ENST00000637329 CAP1Q01518 475 aa16.79■□□□□ 0.28
CLN6-219ENST00000637329 ENPEPQ07075 957 aa16.79■□□□□ 0.28
CLN6-219ENST00000637329 CACNB2Q08289 660 aaPredicted RBP16.79■□□□□ 0.28
CLN6-219ENST00000637329 MKRN4PQ13434 485 aaPredicted RBP16.79■□□□□ 0.28
CLN6-219ENST00000637329 MFSD10Q14728 455 aa16.79■□□□□ 0.28
CLN6-219ENST00000637329 MAP3K21Q5TCX8 1036 aa16.79■□□□□ 0.28
CLN6-219ENST00000637329 CEP135Q66GS9 1140 aa16.79■□□□□ 0.28
CLN6-219ENST00000637329 EFCAB12Q6NXP0 572 aa16.79■□□□□ 0.28
CLN6-219ENST00000637329 TAS1R3Q7RTX0 852 aa16.79■□□□□ 0.28
CLN6-219ENST00000637329 ZSCAN30Q86W11 494 aa16.79■□□□□ 0.28
CLN6-219ENST00000637329 LRRC71Q8N4P6 559 aa16.79■□□□□ 0.28
CLN6-219ENST00000637329 TRAPPC12Q8WVT3 735 aa16.79■□□□□ 0.28
CLN6-219ENST00000637329 CCDC113Q9H0I3 377 aa16.79■□□□□ 0.28
CLN6-219ENST00000637329 SUCLA2Q9P2R7 463 aaPredicted RBP16.79■□□□□ 0.28
CLN6-219ENST00000637329 ZKSCAN5Q9Y2L8 839 aa16.79■□□□□ 0.28
CLN6-219ENST00000637329 ZEB2O60315 1214 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 EXOC3O60645 756 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 PRKAR2AP13861 404 aaKnown RBP16.78■□□□□ 0.28
CLN6-219ENST00000637329 CST5P28325 142 aaPredicted RBP16.78■□□□□ 0.28
CLN6-219ENST00000637329 CNGA1P29973 690 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 PSEN2P49810 448 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 CYP2J2P51589 502 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 KIAA0753Q2KHM9 967 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 FIGNQ5HY92 759 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 MTHFD1LQ6UB35 978 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 ZPBP2Q6X784 338 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 INTS8Q75QN2 995 aaKnown RBP16.78■□□□□ 0.28
CLN6-219ENST00000637329 PPFIBP1Q86W92 1011 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 IFNLR1Q8IU57 520 aaPredicted RBP16.78■□□□□ 0.28
CLN6-219ENST00000637329 CNGA4Q8IV77 575 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 XXYLT1Q8NBI6 393 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 SLAIN1Q8ND83 568 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 CCDC112Q8NEF3 446 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 RAET1EQ8TD07 263 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 KAT2BQ92831 832 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 BICD1Q96G01 975 aa16.78■□□□□ 0.28
CLN6-219ENST00000637329 BORCS6Q96GS4 357 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms