RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 COPS2P61201 443 aa18.98■□□□□ 0.63
CACNA1A-227ENST00000636549 GSPT2Q8IYD1 628 aaKnown RBP18.98■□□□□ 0.63
CACNA1A-227ENST00000636549 TRIML2Q8N7C3 387 aa18.98■□□□□ 0.63
CACNA1A-227ENST00000636549 MAGED4Q96JG8 741 aa18.98■□□□□ 0.63
CACNA1A-227ENST00000636549 DMAP1Q9NPF5 467 aaPredicted RBP18.98■□□□□ 0.63
CACNA1A-227ENST00000636549 SH3BP1Q9Y3L3 701 aa18.98■□□□□ 0.63
CACNA1A-227ENST00000636549 PCDHA13Q9Y5I0 950 aa18.98■□□□□ 0.63
CACNA1A-227ENST00000636549 RALAP11233 206 aa18.98■□□□□ 0.63
CACNA1A-227ENST00000636549 MZF1P28698 734 aaPredicted RBP18.98■□□□□ 0.63
CACNA1A-227ENST00000636549 MTM1Q13496 603 aa18.98■□□□□ 0.63
CACNA1A-227ENST00000636549 TOMM20Q15388 145 aa18.98■□□□□ 0.63
CACNA1A-227ENST00000636549 ZSCAN26Q16670 478 aa18.98■□□□□ 0.63
CACNA1A-227ENST00000636549 SUSD4Q5VX71 490 aa18.98■□□□□ 0.63
CACNA1A-227ENST00000636549 AMHR2Q16671 573 aa18.98■□□□□ 0.63
CACNA1A-227ENST00000636549 FOXR1Q6PIV2 292 aa18.98■□□□□ 0.63
CACNA1A-227ENST00000636549 DR1Q01658 176 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 RAB42Q8N4Z0 105 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 C11orf70Q9BRQ4 267 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 TRIM15Q9C019 465 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 PRAG1Q86YV5 1406 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 HMGCS2P54868 508 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 TUBB2AQ13885 445 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 NUDT18Q6ZVK8 323 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 TUBB2BQ9BVA1 445 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 TRIM55Q9BYV6 548 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 PCDHB6Q9Y5E3 794 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 MTMR2Q13614 643 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 SPATA1Q5VX52 437 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 ARHGAP26Q9UNA1 814 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 ATP10BO94823 1461 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 GRAP2O75791 330 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 HSPA1AP0DMV8 641 aaKnown RBP18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 HSPA1BP0DMV9 641 aaKnown RBP18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 IGFBP4P22692 258 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 TWF1Q12792 350 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 C16orf87Q6PH81 154 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 PATL1Q86TB9 770 aaKnown RBP18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 ANKMY2Q8IV38 441 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 MIER2Q8N344 545 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 CDHR1Q96JP9 859 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 MYO1DO94832 1006 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 CRLF3Q8IUI8 442 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 CCDC33Q8N5R6 958 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 IL17REQ8NFR9 667 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 TRIM11Q96F44 468 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 PNKPQ96T60 521 aa18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 PACSIN2Q9UNF0 486 aaPredicted RBP18.97■□□□□ 0.63
CACNA1A-227ENST00000636549 GUCA1CO95843 209 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 KRT17Q04695 432 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 CCHCR1Q8TD31 782 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 ZNF512Q96ME7 567 aaPredicted RBP18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 STK17AQ9UEE5 414 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 AURKCQ9UQB9 309 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 KRT72Q14CN4 511 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 CHSY1Q86X52 802 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 SLC25A13Q9UJS0 675 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 KRT87PA6NCN2 255 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 TLR2O60603 784 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 TBC1D9BQ66K14 1250 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 PODNQ7Z5L7 613 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 PPM1NQ8N819 430 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 CCDC17Q96LX7 622 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 POLRMTO00411 1230 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 COPEO14579 308 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 PCCAP05165 728 aaPredicted RBP18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 TUBBP07437 444 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 SLFN14P0C7P3 912 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 VPS39Q96JC1 886 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 TRIM45Q9H8W5 580 aaPredicted RBP18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 RNF146Q9NTX7 359 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 CELF2O95319 508 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 CA4P22748 312 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 DNAJB2P25686 324 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 PLEKHM3Q6ZWE6 761 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 HOXC10Q9NYD6 342 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 ADAM22Q9P0K1 906 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 AFF2P51816 1311 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 RNF123Q5XPI4 1314 aa18.96■□□□□ 0.63
CACNA1A-227ENST00000636549 ALDH6A1Q02252 535 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 RD3Q7Z3Z2 195 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 HSPBP1Q9NZL4 362 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 PRR12Q9ULL5 1215 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 GOLGA8RI6L899 631 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 CTNND1O60716 968 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 EFTUD2Q15029 972 aaKnown RBP eCLIP18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 HSP90AA5PQ58FG0 334 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 UPF3AQ9H1J1 476 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 TCF3P15923 654 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 JADE3Q92613 823 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 GCOM2Q9BZD3 368 aaPredicted RBP18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 SCUBE2Q9NQ36 999 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 TOPORSQ9NS56 1045 aaPredicted RBP18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 GJB4Q9NTQ9 266 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 RASGRF2O14827 1237 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 FAM102AQ5T9C2 384 aaPredicted RBP18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 MEI1Q5TIA1 1274 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 PHF21AQ96BD5 680 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 CLCN1P35523 988 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 PPP1R13BQ96KQ4 1090 aa18.95■□□□□ 0.62
CACNA1A-227ENST00000636549 EDC4Q6P2E9 1401 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms