RNA–Protein interactions for RNA: ENST00000636221.1

SMARCA2-248, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-248ENST00000636221 RNPC3Q96LT9 517 aaKnown RBP4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 KIFC3Q9BVG8 833 aa4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 TIPINQ9BVW5 301 aa4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 BLZF1Q9H2G9 400 aa4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 TNMDQ9H2S6 317 aa4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 CUEDC2Q9H467 287 aa4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 AGO3Q9H9G7 860 aaKnown RBP4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 KMT5AQ9NQR1 393 aa4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 PANK4Q9NVE7 773 aa4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 KCND2Q9NZV8 630 aa4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 TBC1D7Q9P0N9 293 aa4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 LARSQ9P2J5 1176 aaKnown RBP4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 USP25Q9UHP3 1055 aa4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 ODF2LQ9ULJ1 636 aa4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 PADI3Q9ULW8 664 aa4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 ST3GAL5Q9UNP4 418 aa4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 PIN4Q9Y237 131 aaKnown RBP4.48□□□□□ -1.69
SMARCA2-248ENST00000636221 ZNF638Q14966 1978 aaKnown RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 VWA8A3KMH1 1905 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 ABHD14A-ACY1A0A1B0GW23 586 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 ENPP3O14638 875 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 B4GALT5O43286 388 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 TRAK2O60296 914 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 KINO60870 393 aaKnown RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 NR1I2O75469 434 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 CXCL10P02778 98 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 AMHP03971 560 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 PRKCBP05771 671 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 PRR29P0C7W0 189 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 PLS3P13797 630 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 ZSCAN20P17040 1043 aaPredicted RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 EIF4BP23588 611 aaKnown RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 NMT1P30419 496 aaKnown RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 NPTX2P47972 431 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 PTENP60484 403 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 UBE2HP62256 183 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 FAM160A1Q05DH4 1040 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 POU5F1BQ06416 359 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 STRN3Q13033 797 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 MAPK7Q13164 816 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 PRPF4BQ13523 1007 aaKnown RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 CUL4BQ13620 913 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 MAPK6Q16659 721 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 PLEKHG4Q58EX7 1191 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 HERC4Q5GLZ8 1057 aaPredicted RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 C9orf50Q5SZB4 431 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 PRPF38BQ5VTL8 546 aaKnown RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 TWF2Q6IBS0 349 aaKnown RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 KRBA2Q6ZNG9 492 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 C16orf59Q7L2K0 433 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 HAUS6Q7Z4H7 955 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 TMCO2Q7Z6W1 182 aaPredicted RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 FAM228AQ86W67 206 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 SFR1Q86XK3 245 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 FAM178BQ8IXR5 827 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 MYOCDQ8IZQ8 938 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 FMR1NBQ8N0W7 255 aaPredicted RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 DAW1Q8N136 415 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 RNF169Q8NCN4 708 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 APBB2Q92870 758 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 ERCC4Q92889 916 aaPredicted RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 CCDC47Q96A33 483 aaKnown RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 DNAJC19Q96DA6 116 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 BICD1Q96G01 975 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 PAGE5Q96GU1 130 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 CPB2Q96IY4 423 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 ADAM2Q99965 735 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 GDF15Q99988 308 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 C7orf25Q9BPX7 421 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 ZBED2Q9BTP6 218 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 C2orf40Q9H1Z8 148 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 MTIF3Q9H2K0 278 aaKnown RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 MINDY3Q9H8M7 445 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 MRPL44Q9H9J2 332 aaKnown RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 C17orf75Q9HAS0 396 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 MAGEF1Q9HAY2 307 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 IFT122Q9HBG6 1241 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 PARVGQ9HBI0 331 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 ERVK-5Q9HDB9 667 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 KBTBD4Q9NVX7 518 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 DACT1Q9NYF0 836 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 CXXC1Q9P0U4 656 aaPredicted RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 KCNG1Q9UIX4 513 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 HOOK1Q9UJC3 728 aaKnown RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 LRFN2Q9ULH4 789 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 COLQQ9Y215 455 aaPredicted RBP4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 HPSEQ9Y251 543 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 USP20Q9Y2K6 914 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 SLC4A7Q9Y6M7 1214 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 SQORQ9Y6N5 450 aa4.47□□□□□ -1.69
SMARCA2-248ENST00000636221 ADGRA3Q8IWK6 1321 aa4.46□□□□□ -1.69
SMARCA2-248ENST00000636221 COL4A4P53420 1690 aaPredicted RBP4.46□□□□□ -1.7
SMARCA2-248ENST00000636221 FAM237AA0A1B0GTK4 181 aa4.46□□□□□ -1.7
SMARCA2-248ENST00000636221 H0YCG3 227 aa4.46□□□□□ -1.7
SMARCA2-248ENST00000636221 ACTN4O43707 911 aaKnown RBP4.46□□□□□ -1.7
SMARCA2-248ENST00000636221 GTPBP6O43824 516 aaPredicted RBP4.46□□□□□ -1.7
SMARCA2-248ENST00000636221 MGEA5O60502 916 aa4.46□□□□□ -1.7
SMARCA2-248ENST00000636221 TSPAN1O60635 241 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms