RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 SLFN13Q68D06 897 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 ARHGEF18Q6ZSZ5 1173 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 KRT77Q7Z794 578 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 RTN4RL1Q86UN2 441 aaPredicted RBP3.58□□□□□ -1.84
PSPC1-208ENST00000635562 RASSF3Q86WH2 238 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 CNTD1Q8N815 330 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 NGDNQ8NEJ9 315 aaKnown RBP3.58□□□□□ -1.84
PSPC1-208ENST00000635562 SH3RF3Q8TEJ3 882 aaPredicted RBP3.58□□□□□ -1.84
PSPC1-208ENST00000635562 SLC5A5Q92911 643 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 FOXRED1Q96CU9 486 aaPredicted RBP3.58□□□□□ -1.84
PSPC1-208ENST00000635562 TRIM44Q96DX7 344 aaPredicted RBP3.58□□□□□ -1.84
PSPC1-208ENST00000635562 TMEM209Q96SK2 561 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 KLC2Q9H0B6 622 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 TMEM168Q9H0V1 697 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 SLITRK6Q9H5Y7 841 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 L2HGDHQ9H9P8 463 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 CWC25Q9NXE8 425 aaPredicted RBP3.58□□□□□ -1.84
PSPC1-208ENST00000635562 BTBD7Q9P203 1132 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 SYNPO2Q9UMS6 1093 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 WASF3Q9UPY6 502 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 TCAF1Q9Y4C2 921 aa3.58□□□□□ -1.84
PSPC1-208ENST00000635562 FOXP2O15409 715 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 TSPAN6O43657 245 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 B4GALT3O60512 393 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 MPIG6BO95866 241 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 MYL1P05976 194 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 LSP1P33241 339 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 GRIN1Q05586 938 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 MCL1Q07820 350 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 DBPQ10586 325 aaPredicted RBP3.57□□□□□ -1.84
PSPC1-208ENST00000635562 PPP2R5AQ15172 486 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 CDC37Q16543 378 aaPredicted RBP3.57□□□□□ -1.84
PSPC1-208ENST00000635562 CR1LQ2VPA4 569 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 SYDE2Q5VT97 1194 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 BROXQ5VW32 411 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 TEPPQ6URK8 271 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 C11orf74Q86VG3 221 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 ZSCAN30Q86W11 494 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 PASD1Q8IV76 773 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 ZZZ3Q8IYH5 903 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 PAF1Q8N7H5 531 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 CCDC89Q8N998 374 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 TEX19Q8NA77 164 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 LSM14AQ8ND56 463 aaKnown RBP3.57□□□□□ -1.84
PSPC1-208ENST00000635562 DNERQ8NFT8 737 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 ASB15Q8WXK1 588 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 TOE1Q96GM8 510 aaKnown RBP3.57□□□□□ -1.84
PSPC1-208ENST00000635562 TTC14Q96N46 770 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 MRIQ9BWK5 157 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 ZDHHC5Q9C0B5 715 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 CCDC8Q9H0W5 538 aaPredicted RBP3.57□□□□□ -1.84
PSPC1-208ENST00000635562 MS4A5Q9H3V2 200 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 DEF6Q9H4E7 631 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 RIC8BQ9NVN3 520 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 ABCF2Q9UG63 623 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 ST6GALNAC2Q9UJ37 374 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 TRHDEQ9UKU6 1024 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 ASB1Q9Y576 335 aa3.57□□□□□ -1.84
PSPC1-208ENST00000635562 TNKSO95271 1327 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 GOLGA6L22H0YM25 854 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 TCERG1O14776 1098 aaKnown RBP3.56□□□□□ -1.84
PSPC1-208ENST00000635562 MUSKO15146 869 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 ALDH1L1O75891 902 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 CASP2P42575 452 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 TRAPPC10P48553 1259 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 TERF1P54274 439 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 PPP2CBP62714 309 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 PPP2CAP67775 309 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 KRT85P78386 507 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 PURAQ00577 322 aaKnown RBP3.56□□□□□ -1.84
PSPC1-208ENST00000635562 NEXNQ0ZGT2 675 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 BRD3Q15059 726 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 PDCD1Q15116 288 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 DDB1Q16531 1140 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 INO80DQ53TQ3 878 aaPredicted RBP3.56□□□□□ -1.84
PSPC1-208ENST00000635562 GJC2Q5T442 439 aaPredicted RBP3.56□□□□□ -1.84
PSPC1-208ENST00000635562 C1QTNF12Q5T7M4 302 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 CD276Q5ZPR3 534 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 IQSEC1Q6DN90 963 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 LIMS2Q7Z4I7 341 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 SPRED1Q7Z699 444 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 EGFL6Q8IUX8 553 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 WDR75Q8IWA0 830 aaKnown RBP3.56□□□□□ -1.84
PSPC1-208ENST00000635562 KLHL36Q8N4N3 616 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 LMBR1Q8WVP7 490 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 RSPH1Q8WYR4 309 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 ORAI2Q96SN7 254 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 LRRC27Q9C0I9 530 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 VPS11Q9H270 941 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 PCIF1Q9H4Z3 704 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 AS3MTQ9HBK9 375 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 BARX1Q9HBU1 254 aaPredicted RBP3.56□□□□□ -1.84
PSPC1-208ENST00000635562 CD248Q9HCU0 757 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 TOMM22Q9NS69 142 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 PPP4R1LQ9P1A2 415 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 USP36Q9P275 1121 aaKnown RBP3.56□□□□□ -1.84
PSPC1-208ENST00000635562 FTSJ1Q9UET6 329 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 TESMINQ9Y4I5 508 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 SPEF1Q9Y4P9 236 aa3.56□□□□□ -1.84
PSPC1-208ENST00000635562 SYNRGQ9UMZ2 1314 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms