RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 ALKBH8Q96BT7 664 aaKnown RBP11.85□□□□□ -0.51
VPS8-227ENST00000625842 CFAP36Q96G28 342 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 RWDD3Q9Y3V2 267 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 ALDH2P05091 517 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 SETSIPP0DME0 302 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 PPATQ06203 517 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 UBE2Q2Q8WVN8 375 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 C1QTNF7Q9BXJ2 289 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 NDEL1Q9GZM8 345 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 TRPM5Q9NZQ8 1165 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 MAP10Q9P2G4 905 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 DNAJC6O75061 913 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 DDNO94850 711 aaPredicted RBP11.85□□□□□ -0.51
VPS8-227ENST00000625842 HIST1H2AGP0C0S8 130 aaPredicted RBP11.85□□□□□ -0.51
VPS8-227ENST00000625842 HIST1H2ADP20671 130 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 RASSF2P50749 326 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 MTFR1Q15390 333 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 NBPF9Q3BBW0 867 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.85□□□□□ -0.51
VPS8-227ENST00000625842 DTNBP1Q96EV8 351 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 CEP95Q96GE4 821 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 HIST1H2AHQ96KK5 128 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 XPO6Q96QU8 1125 aaKnown RBP11.85□□□□□ -0.51
VPS8-227ENST00000625842 STRBPQ96SI9 672 aaKnown RBP11.85□□□□□ -0.51
VPS8-227ENST00000625842 HIST1H2AJQ99878 128 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 H2AFJQ9BTM1 129 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 ECT2Q9H8V3 914 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.85□□□□□ -0.51
VPS8-227ENST00000625842 SLC25A13Q9UJS0 675 aa11.85□□□□□ -0.51
VPS8-227ENST00000625842 A0A0D9SFI3 127 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 FAM47E-STBD1D6RA91 191 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 SLC9A3R1O14745 358 aaPredicted RBP11.84□□□□□ -0.51
VPS8-227ENST00000625842 NFE2Q16621 373 aaPredicted RBP11.84□□□□□ -0.51
VPS8-227ENST00000625842 ZNF280DQ6N043 979 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 FAM83AQ86UY5 434 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 MCUR1Q96AQ8 359 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 CARD6Q9BX69 1037 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 KLC2Q9H0B6 622 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 LRRIQ3A6PVS8 624 aaPredicted RBP11.84□□□□□ -0.51
VPS8-227ENST00000625842 PDHXO00330 501 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 OCM2P0CE71 109 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 OCMP0CE72 109 aaPredicted RBP11.84□□□□□ -0.51
VPS8-227ENST00000625842 ACADSBP45954 432 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 APLP1P51693 650 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 TAP1Q03518 808 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 KARSQ15046 597 aaKnown RBP11.84□□□□□ -0.51
VPS8-227ENST00000625842 DBN1Q16643 649 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 ATL2Q8NHH9 583 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 FAM84BQ96KN1 310 aaPredicted RBP11.84□□□□□ -0.51
VPS8-227ENST00000625842 PLA2G12BQ9BX93 195 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 ABCF3Q9NUQ8 709 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 USP31Q70CQ4 1352 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 RNF40O75150 1001 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 PPP6R2O75170 966 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 PSMA2P25787 234 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 KLRC2P26717 231 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 TNS4Q8IZW8 715 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 CMTR1Q8N1G2 835 aaKnown RBP11.84□□□□□ -0.51
VPS8-227ENST00000625842 GPRASP2Q96D09 838 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 FAM217BQ9NTX9 383 aaPredicted RBP11.84□□□□□ -0.51
VPS8-227ENST00000625842 RASGRF2O14827 1237 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 ORC4O43929 436 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 PSMD6Q15008 389 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 TUFT1Q9NNX1 390 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 UBE2TQ9NPD8 197 aaPredicted RBP11.84□□□□□ -0.51
VPS8-227ENST00000625842 RGL1Q9NZL6 768 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 PLA2G4CQ9UP65 541 aa11.84□□□□□ -0.51
VPS8-227ENST00000625842 ZMYM4Q5VZL5 1548 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 MEIS1O00470 390 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 POMCP01189 267 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 TCP1P17987 556 aaKnown RBP11.83□□□□□ -0.52
VPS8-227ENST00000625842 CYP2C19P33261 490 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 PPM1AP35813 382 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 SEMA3FQ13275 785 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 KHDRBS2Q5VWX1 349 aaKnown RBP11.83□□□□□ -0.52
VPS8-227ENST00000625842 KAZNQ674X7 775 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 ANKRD23Q86SG2 305 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 LINC00116Q8NCU8 138 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 SYMPKQ92797 1274 aaKnown RBP11.83□□□□□ -0.52
VPS8-227ENST00000625842 P2RX5Q93086 422 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 FGD4Q96M96 766 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 CYP26B1Q9NR63 512 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 UBQLN1Q9UMX0 589 aaKnown RBP11.83□□□□□ -0.52
VPS8-227ENST00000625842 DAAM1Q9Y4D1 1078 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 ATICP31939 592 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 GRM4Q14833 912 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 MMEL1Q495T6 779 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 CCDC149Q6ZUS6 474 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 CACNA2D3Q8IZS8 1091 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 RBM41Q96IZ5 413 aaKnown RBP11.83□□□□□ -0.52
VPS8-227ENST00000625842 MCCC1Q96RQ3 725 aaPredicted RBP11.83□□□□□ -0.52
VPS8-227ENST00000625842 ABHD16BQ9H3Z7 469 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 UXTQ9UBK9 157 aaPredicted RBP11.83□□□□□ -0.52
VPS8-227ENST00000625842 PCDHB9Q9Y5E1 797 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 UBE4BO95155 1302 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 LRRD1A4D1F6 860 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 PRKAB2O43741 272 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 MOCS2O96007 188 aaPredicted RBP11.83□□□□□ -0.52
VPS8-227ENST00000625842 ALX1Q15699 326 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 SPATA1Q5VX52 437 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms