RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 ZBED1O96006 694 aa9.48□□□□□ -0.89
VCL-206ENST00000623461 CASP1P29466 404 aa9.48□□□□□ -0.89
VCL-206ENST00000623461 EXOSC10Q01780 885 aaKnown RBP9.48□□□□□ -0.89
VCL-206ENST00000623461 CYTH1Q15438 398 aa9.48□□□□□ -0.89
VCL-206ENST00000623461 PFKFB3Q16875 520 aaPredicted RBP9.48□□□□□ -0.89
VCL-206ENST00000623461 C16orf89Q6UX73 402 aa9.48□□□□□ -0.89
VCL-206ENST00000623461 TMCO5AQ8N6Q1 288 aa9.48□□□□□ -0.89
VCL-206ENST00000623461 GGA1Q9UJY5 639 aa9.48□□□□□ -0.89
VCL-206ENST00000623461 SKOR1P84550 965 aa9.48□□□□□ -0.89
VCL-206ENST00000623461 OCRLQ01968 901 aa9.48□□□□□ -0.89
VCL-206ENST00000623461 ZNF211Q13398 564 aaPredicted RBP9.48□□□□□ -0.89
VCL-206ENST00000623461 WASHC2DQ5SRD0 308 aa9.48□□□□□ -0.89
VCL-206ENST00000623461 TBC1D9BQ66K14 1250 aa9.48□□□□□ -0.89
VCL-206ENST00000623461 LRRC34Q8IZ02 419 aa9.48□□□□□ -0.89
VCL-206ENST00000623461 JDP2Q8WYK2 163 aa9.48□□□□□ -0.89
VCL-206ENST00000623461 CATSPER2Q96P56 530 aa9.48□□□□□ -0.89
VCL-206ENST00000623461 NPHS2Q9NP85 383 aa9.48□□□□□ -0.89
VCL-206ENST00000623461 ANGPTL3Q9Y5C1 460 aa9.48□□□□□ -0.89
VCL-206ENST00000623461 FOXN1O15353 648 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 ZBED4O75132 1171 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 CHEK2O96017 543 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 TMEM191BP0C7N4 346 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 MORF4L2Q15014 288 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 SYN2Q92777 582 aaPredicted RBP9.47□□□□□ -0.89
VCL-206ENST00000623461 ZKSCAN4Q969J2 545 aaPredicted RBP9.47□□□□□ -0.89
VCL-206ENST00000623461 G3BP2Q9UN86 482 aaKnown RBP9.47□□□□□ -0.89
VCL-206ENST00000623461 SERPINI2O75830 405 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 PDIA2Q13087 525 aaKnown RBP9.47□□□□□ -0.89
VCL-206ENST00000623461 THOC5Q13769 683 aaKnown RBP9.47□□□□□ -0.89
VCL-206ENST00000623461 FRMD5Q7Z6J6 570 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 OSBPL8Q9BZF1 889 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 UBN1Q9NPG3 1134 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 TRIM10Q9UDY6 481 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 ITSN1Q15811 1721 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 TULP2O00295 520 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 UFL1O94874 794 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 CYFIP1Q7L576 1253 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 GJB4Q9NTQ9 266 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 ADA2Q9NZK5 511 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 MAP2K7O14733 419 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 YARSP54577 528 aaKnown RBP9.47□□□□□ -0.89
VCL-206ENST00000623461 ARHGAP27Q6ZUM4 889 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 ADSSL1Q8N142 457 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 OR2W6PQ8NHA6 318 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 CCT7Q99832 543 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 DDX56Q9NY93 547 aaKnown RBP9.47□□□□□ -0.89
VCL-206ENST00000623461 DBR1Q9UK59 544 aaKnown RBP9.47□□□□□ -0.89
VCL-206ENST00000623461 CHMP2BQ9UQN3 213 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 SUPT3HO75486 399 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 SYF2O95926 243 aaKnown RBP9.47□□□□□ -0.89
VCL-206ENST00000623461 SLC1A1P43005 524 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 BCAMP50895 628 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 CYP4A11Q02928 519 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 NAALADL2Q58DX5 795 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 RFX8Q6ZV50 586 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 ZNF483Q8TF39 744 aaPredicted RBP9.47□□□□□ -0.89
VCL-206ENST00000623461 NUP85Q9BW27 656 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 LY9Q9HBG7 655 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 LZTS1Q9Y250 596 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 ATP11BQ9Y2G3 1177 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 ZNF608Q9ULD9 1512 aaPredicted RBP9.47□□□□□ -0.89
VCL-206ENST00000623461 RASGRF1Q13972 1273 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 TFDP2Q14188 446 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 LRRC8BQ6P9F7 803 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 PRPF38AQ8NAV1 312 aaKnown RBP9.47□□□□□ -0.89
VCL-206ENST00000623461 DHX38Q92620 1227 aaKnown RBP9.47□□□□□ -0.89
VCL-206ENST00000623461 ERP44Q9BS26 406 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 CYP4F11Q9HBI6 524 aa9.47□□□□□ -0.89
VCL-206ENST00000623461 PDS5AQ29RF7 1337 aaKnown RBP9.47□□□□□ -0.89
VCL-206ENST00000623461 AHCYL1O43865 530 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 TMEM259Q4ZIN3 620 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 DNAAF3Q8N9W5 541 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 PROCA1Q8NCQ7 364 aaPredicted RBP9.46□□□□□ -0.89
VCL-206ENST00000623461 CASP10Q92851 521 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 MAGEB18Q96M61 343 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 CALN1Q9BXU9 219 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 GPHNQ9NQX3 736 aaPredicted RBP9.46□□□□□ -0.89
VCL-206ENST00000623461 TFCP2L1Q9NZI6 479 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 PSMC3IPQ9P2W1 217 aaPredicted RBP9.46□□□□□ -0.89
VCL-206ENST00000623461 PRPSAP2O60256 369 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 SOX5P35711 763 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 ARL4AP40617 200 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 COASYQ13057 564 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 KIF19Q2TAC6 998 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 SGMS1Q86VZ5 419 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 ZBED8Q8IZ13 594 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 NR3C1P04150 777 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 CCDC15Q0P6D6 951 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 INPP5AQ14642 412 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 RCN1Q15293 331 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 ALX1Q15699 326 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 BTNL9Q6UXG8 535 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 RHOT1Q8IXI2 618 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 CLMNQ96JQ2 1002 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 AMNQ9BXJ7 453 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 PCDHA1Q9Y5I3 950 aa9.46□□□□□ -0.89
VCL-206ENST00000623461 CACNB1Q02641 598 aaPredicted RBP9.46□□□□□ -0.9
VCL-206ENST00000623461 LLGL1Q15334 1064 aa9.46□□□□□ -0.9
VCL-206ENST00000623461 LONRF1Q17RB8 773 aa9.46□□□□□ -0.9
VCL-206ENST00000623461 TRIM67Q6ZTA4 783 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms