RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 TLE2Q04725 743 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 TMEM132DQ14C87 1099 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 NOL9Q5SY16 702 aaKnown RBP9.82□□□□□ -0.84
HDAC9-229ENST00000622668 HPS5Q9UPZ3 1129 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 SDK1Q7Z5N4 2213 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 UNCXA6NJT0 531 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 E7EVH7 732 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 MAGEA1P43355 309 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 PLCB4Q15147 1175 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 DUSP28Q4G0W2 176 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 TYW1BQ6NUM6 668 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 SPATA2LQ8IUW3 424 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-229ENST00000622668 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.82□□□□□ -0.84
HDAC9-229ENST00000622668 EHBP1Q8NDI1 1231 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 NUP58Q9BVL2 599 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 LZTFL1Q9NQ48 299 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 GCNT4Q9P109 453 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 SLC8A2Q9UPR5 921 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 CYTH3O43739 400 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 CCNE1P24864 410 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 ADORA2BP29275 332 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 GBP2P32456 591 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-229ENST00000622668 CTNNB1P35222 781 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 KRT81Q14533 505 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 SEZ6Q53EL9 994 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 RNF219Q5W0B1 726 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-229ENST00000622668 DNAJC18Q9H819 358 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 FANCLQ9NW38 375 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 GAS8O95995 478 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 FGBP02675 491 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 CYP11B2P19099 503 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 GRIK1P39086 918 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 NOLC1Q14978 699 aaKnown RBP eCLIP9.82□□□□□ -0.84
HDAC9-229ENST00000622668 CELF3Q5SZQ8 465 aaKnown RBP9.82□□□□□ -0.84
HDAC9-229ENST00000622668 ZNF658Q5TYW1 1059 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-229ENST00000622668 CATSPER3Q86XQ3 398 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 GPD1LQ8N335 351 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 NME8Q8N427 588 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 CCDC112Q8NEF3 446 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 SELENOOQ9BVL4 669 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 UNC93B1Q9H1C4 597 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 HAUS2Q9NVX0 235 aa9.82□□□□□ -0.84
HDAC9-229ENST00000622668 STRCP1A6NGW2 1772 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 PDGFRBP09619 1106 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 SKILP12757 684 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 SP100P23497 879 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-229ENST00000622668 ALDH1A3P47895 512 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 KYAT1Q16773 422 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 REEP2Q9BRK0 252 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 C11orf49Q9H6J7 331 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 FAM204AQ9H8W3 233 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 RGPD5Q99666 1765 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 MED7O43513 233 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 KNOP1Q1ED39 458 aaKnown RBP9.81□□□□□ -0.84
HDAC9-229ENST00000622668 ACBD3Q9H3P7 528 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 STRIP2Q9ULQ0 834 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 TRPV2Q9Y5S1 764 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 FAM208AQ9UK61 1670 aaKnown RBP9.81□□□□□ -0.84
HDAC9-229ENST00000622668 GOLGA6L10A6NI86 522 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 PLS3P13797 630 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 ZNF18P17022 549 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 CASQ1P31415 396 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 CCDC122Q5T0U0 273 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 SPATA1Q5VX52 437 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 PHLDB2Q86SQ0 1253 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 HPS3Q969F9 1004 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 LMCD1Q9NZU5 365 aa9.81□□□□□ -0.84
HDAC9-229ENST00000622668 NRCAMQ92823 1304 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 TMEM150BA6NC51 233 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 CCDC175P0C221 793 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 TRIM49P0CI25 452 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 TRIM49CP0CI26 452 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 KLRC2P26717 231 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 CYP4A22Q5TCH4 519 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 BSPRYQ5W0U4 402 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 FIBCD1Q8N539 461 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 ZNF653Q96CK0 615 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 CPB2Q96IY4 423 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.8□□□□□ -0.84
HDAC9-229ENST00000622668 CDY2AQ9Y6F7 541 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 ALS2Q96Q42 1657 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 C4BP0C0L5 1744 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 MAP1BP46821 2468 aaKnown RBP9.8□□□□□ -0.84
HDAC9-229ENST00000622668 SMIM10L2AP0DMW4 78 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 SMIM10L2BP0DMW5 78 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 ACRP10323 421 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 RBP5P82980 135 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 TMEM270Q6UE05 265 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 APPL2Q8NEU8 664 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 IL31RAQ8NI17 732 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 TIPINQ9BVW5 301 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 ABI2Q9NYB9 513 aaPredicted RBP9.8□□□□□ -0.84
HDAC9-229ENST00000622668 ODF2LQ9ULJ1 636 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 GABRQQ9UN88 632 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 IGSF9BQ9UPX0 1349 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 PVALEFA0A1B0GWK0 134 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 CASTOR2A6NHX0 329 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 FAM86B1E9PN63 330 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 STK10O94804 968 aaKnown RBP9.8□□□□□ -0.84
HDAC9-229ENST00000622668 FAM86B2P0C5J1 330 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms