RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 RSAD2Q8WXG1 361 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 CCT6BQ92526 530 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 RPAP3Q9H6T3 665 aaPredicted RBP8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 UBE2TQ9NPD8 197 aaPredicted RBP8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 NHSL1Q5SYE7 1610 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 MYO1FO00160 1098 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 GIPC1O14908 333 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 SLURP2P0DP57 97 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 ADCY8P40145 1251 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 PDE6CP51160 858 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 PTK2Q05397 1052 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 ITIH3Q06033 890 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 PPFIA1Q13136 1202 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 TRIP13Q15645 432 aaPredicted RBP8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 KRT71Q3SY84 523 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 LRRC55Q6ZSA7 311 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 MICALL1Q8N3F8 863 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 SH2D3CQ8N5H7 860 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 HAUS1Q96CS2 278 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 NT5C1BQ96P26 610 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 TLR10Q9BXR5 811 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 WDR11Q9BZH6 1224 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 GABBR1Q9UBS5 961 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 DAGLAQ9Y4D2 1042 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 EBAG9O00559 213 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 ARHGEF6Q15052 776 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 MAP1SQ66K74 1059 aaPredicted RBP8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 MIS18BP1Q6P0N0 1132 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 DSTYKQ6XUX3 929 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 IFT20Q8IY31 132 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 RAET1EQ8TD07 263 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 AENQ8WTP8 325 aaKnown RBP8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 BAP1Q92560 729 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 FGFBP2Q9BYJ0 223 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 GOLPH3Q9H4A6 298 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 NKIRAS1Q9NYS0 192 aa8.91□□□□□ -0.98
PTPDC1-204ENST00000620992 KRIT1O00522 736 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 KRT14P02533 472 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 KLRC1P26715 233 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 GCLMP48507 274 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 TSEN2Q8NCE0 465 aaKnown RBP8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 SAAL1Q96ER3 474 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 DEFB129Q9H1M3 183 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 SNX25Q9H3E2 840 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 RIOX1Q9H6W3 641 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 PARVGQ9HBI0 331 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 HOXC10Q9NYD6 342 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 AMFRQ9UKV5 643 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 UTP11Q9Y3A2 253 aaKnown RBP8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 ROBO3Q96MS0 1386 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 SERPING1P05155 500 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 CCND2P30279 289 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 ELF1P32519 619 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 CARSP49589 748 aaKnown RBP8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 NT5C2P49902 561 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 ARHGAP4P98171 946 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 KCNMA1Q12791 1236 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 BAATQ14032 418 aaPredicted RBP8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 PDIA5Q14554 519 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 PPP6R3Q5H9R7 873 aaPredicted RBP8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 KLHDC7AQ5VTJ3 777 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 OR6B2Q6IFH4 312 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 GANCQ8TET4 914 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 ARL8AQ96BM9 186 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 SMC6Q96SB8 1091 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 PACSIN1Q9BY11 444 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 JMJD4Q9H9V9 463 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 LRRC4Q9HBW1 653 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 CEP72Q9P209 647 aa8.9□□□□□ -0.98
PTPDC1-204ENST00000620992 PIK3R2O00459 728 aa8.9□□□□□ -0.99
PTPDC1-204ENST00000620992 STAM2O75886 525 aa8.9□□□□□ -0.99
PTPDC1-204ENST00000620992 STK10O94804 968 aaKnown RBP8.9□□□□□ -0.99
PTPDC1-204ENST00000620992 RARBP10826 455 aa8.9□□□□□ -0.99
PTPDC1-204ENST00000620992 ACTN1P12814 892 aa8.9□□□□□ -0.99
PTPDC1-204ENST00000620992 HNRNPH3P31942 346 aaKnown RBP8.9□□□□□ -0.99
PTPDC1-204ENST00000620992 SLC12A2P55011 1212 aa8.9□□□□□ -0.99
PTPDC1-204ENST00000620992 MYL7Q01449 175 aa8.9□□□□□ -0.99
PTPDC1-204ENST00000620992 PSMD2Q13200 908 aa8.9□□□□□ -0.99
PTPDC1-204ENST00000620992 PDCLQ13371 301 aa8.9□□□□□ -0.99
PTPDC1-204ENST00000620992 TTC31Q49AM3 519 aaPredicted RBP8.9□□□□□ -0.99
PTPDC1-204ENST00000620992 PARD3BQ8TEW8 1205 aa8.9□□□□□ -0.99
PTPDC1-204ENST00000620992 SPATA17Q96L03 361 aa8.9□□□□□ -0.99
PTPDC1-204ENST00000620992 HEXIM2Q96MH2 286 aaKnown RBP8.9□□□□□ -0.99
PTPDC1-204ENST00000620992 MSTO1Q9BUK6 570 aa8.9□□□□□ -0.99
PTPDC1-204ENST00000620992 CCDC88AQ3V6T2 1871 aa8.9□□□□□ -0.99
PTPDC1-204ENST00000620992 A0A087X0T9 212 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 ESYT2A0FGR8 921 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 ZBTB5O15062 677 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 CELF2O95319 508 aaKnown RBP8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 FAM228BP0C875 321 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 MXI1P50539 228 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 IRAK1P51617 712 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 RHBDL3P58872 404 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 NFIAQ12857 509 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 TFDP1Q14186 410 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 STXBP2Q15833 593 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 COL23A1Q86Y22 540 aaPredicted RBP8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 METTL14Q9HCE5 456 aaKnown RBP8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 PNMA3Q9UL41 463 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 CD2APQ9Y5K6 639 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms