RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.08■□□□□ 0.323e-7■■■■□ 20.8
SEMA3B-214ENST00000619119 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.08■□□□□ 0.328e-6■■■□□ 14.7
SEMA3B-214ENST00000619119 A0A1W2PQC6 194 aa17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 F5H6K3 240 aa17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 KLRC3Q07444 240 aa17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 RBM26Q5T8P6 1007 aaKnown RBP17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 SH3RF1Q7Z6J0 888 aa17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 APLFQ8IW19 511 aaPredicted RBP17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 COL4A5P29400 1685 aa17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 RGPD3A6NKT7 1758 aaPredicted RBP17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 RGPD4Q7Z3J3 1758 aa17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 OR52Z1P0C646 297 aa17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 ECHS1P30084 290 aa17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 EIF4A3P38919 411 aaKnown RBP17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 MAGEA1P43355 309 aa17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 MPP3Q13368 585 aa17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 TSNAXIP1Q2TAA8 658 aa17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 TATDN1Q6P1N9 297 aa17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 PDXDC2PQ6P474 469 aa17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 NIM1KQ8IY84 436 aa17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 ISCUQ9H1K1 167 aa17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 ATXN10Q9UBB4 475 aa17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 MAGEC2Q9UBF1 373 aaPredicted RBP17.07■□□□□ 0.32
SEMA3B-214ENST00000619119 USP17L15C9J2P7 530 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 USP17L13C9JLJ4 530 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 USP17L11C9JVI0 530 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 USP17L18D6R9N7 530 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 USP17L22D6RA61 530 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 USP17L17D6RBQ6 530 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 USP17L19D6RCP7 530 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 USP17L20D6RJB6 530 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 ZBTB5O15062 677 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 FLOT1O75955 427 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 DESP17661 470 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 PEX5P50542 639 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 ZNF131P52739 623 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 TNNC1P63316 161 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 USP17L24Q0WX57 530 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 MUM1Q2TAK8 710 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 Q4G0T1 1027 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 OR52E8Q6IFG1 317 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 USP17L6PQ6QN14 398 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 TMEM179Q6ZVK1 233 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 RNF10Q8N5U6 811 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 ZNF507Q8TCN5 953 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 TMEM39BQ9GZU3 492 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 NSRP1Q9H0G5 558 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 INTS9Q9NV88 658 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 GNAZP19086 355 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 GSTT1P30711 240 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 ZYXQ15942 572 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 QRICH1Q2TAL8 776 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 USH1GQ495M9 461 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 DNAJC9Q8WXX5 260 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 TRIM47Q96LD4 638 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 ANKRD27Q96NW4 1050 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 ARHGEF3Q9NR81 526 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 DISC1Q9NRI5 854 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 ZNF70Q9UC06 446 aaPredicted RBP17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 SCOCQ9UIL1 159 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 LNPEPQ9UIQ6 1025 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 HDAC9Q9UKV0 1011 aa17.06■□□□□ 0.32
SEMA3B-214ENST00000619119 SLC37A4O43826 429 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 PRCPP42785 496 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 ECE1P42892 770 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 SESN3P58005 492 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 PABPC1LQ4VXU2 614 aaKnown RBP17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 NOX5Q96PH1 765 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 CCDC113Q9H0I3 377 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 RNPEPL1Q9HAU8 725 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 PIM2Q9P1W9 311 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 MYH7BA7E2Y1 1941 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 PFDN1O60925 122 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 PMS1P54277 932 aaKnown RBP17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 LCA5Q86VQ0 697 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 CCNJLQ8IV13 435 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 ATXN2LQ8WWM7 1075 aaKnown RBP17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 THAP9Q9H5L6 903 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 EXOC1Q9NV70 894 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 ARHGAP20Q9P2F6 1191 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 PCDHA1Q9Y5I3 950 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 MYH4Q9Y623 1939 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 A0A1W2PRG0 241 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 ENTPD3O75355 529 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 NDUFB10O96000 172 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 VIL1P09327 827 aaKnown RBP17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 DHX9Q08211 1270 aaKnown RBP17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 SFSWAPQ12872 951 aaKnown RBP17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 FAM47EQ6ZV65 393 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 CCDC84Q86UT8 332 aaPredicted RBP17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 FAM114A1Q8IWE2 563 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 LRRC15Q8TF66 581 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 TTYH3Q9C0H2 523 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 PSTPIP2Q9H939 334 aa17.05■□□□□ 0.32
SEMA3B-214ENST00000619119 FAM200BP0CF97 657 aa17.04■□□□□ 0.32
SEMA3B-214ENST00000619119 DNM2P50570 870 aa17.04■□□□□ 0.32
SEMA3B-214ENST00000619119 CXCL9Q07325 125 aa17.04■□□□□ 0.32
SEMA3B-214ENST00000619119 BNIP1Q12981 228 aa17.04■□□□□ 0.32
SEMA3B-214ENST00000619119 PTPROQ16827 1216 aa17.04■□□□□ 0.32
SEMA3B-214ENST00000619119 NAALADL2Q58DX5 795 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms