RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 PCDHA12Q9UN75 941 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 MEIS2O14770 477 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 SLC8A1P32418 973 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 CLNS1AP54105 237 aaKnown RBP7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 BIRC3Q13489 604 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 GADL1Q6ZQY3 521 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 PEX26Q7Z412 305 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 MYCBPAPQ8TBZ2 947 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 SPIRE2Q8WWL2 714 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 HPS3Q969F9 1004 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 GJA10Q969M2 543 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 ATG4CQ96DT6 458 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 PURBQ96QR8 312 aaKnown RBP7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 NAP1L4Q99733 375 aaKnown RBP7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 WDR18Q9BV38 432 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 NSRP1Q9H0G5 558 aaKnown RBP7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 RANBP17Q9H2T7 1088 aaKnown RBP7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 EHMT1Q9H9B1 1298 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 SEPT11Q9NVA2 429 aaKnown RBP7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 CEP72Q9P209 647 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 COL4A3BPQ9Y5P4 624 aa7.58□□□□□ -1.2
SRGAP3-213ENST00000618999 BRCA1P38398 1863 aaKnown RBP7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 PVALEFA0A1B0GWK0 134 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 TLDC2A0PJX2 215 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 C19orf81C9J6K1 198 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 PITPNM1O00562 1244 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 GCFC2P16383 781 aaKnown RBP7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 VGLL4Q14135 290 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 CRTC2Q53ET0 693 aaPredicted RBP7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 WDR75Q8IWA0 830 aaKnown RBP7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 NELFCDQ8IXH7 590 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 GUF1Q8N442 669 aaKnown RBP7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 KAT2BQ92831 832 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 RSRC1Q96IZ7 334 aaKnown RBP7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 ADAMTS1Q9UHI8 967 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 ZNF112Q9UJU3 913 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 PITPNM2Q9BZ72 1349 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 MYH4Q9Y623 1939 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 PGRMC1O00264 195 aaKnown RBP7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 CETN3O15182 167 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 FSBPO95073 299 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 GLI1P08151 1106 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 TNFRSF8P28908 595 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 LRRC41Q15345 812 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 PPP4R3AQ6IN85 833 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 N4BP2L2Q92802 583 aaPredicted RBP7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 CDCA5Q96FF9 252 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 PBKQ96KB5 322 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 TRIM31Q9BZY9 425 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 ZMIZ1Q9ULJ6 1067 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 PPP1R9AQ9ULJ8 1098 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 PACSIN2Q9UNF0 486 aaPredicted RBP7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 PSME4Q14997 1843 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 POTEMA6NI47 508 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 ZBBXA8MT70 800 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 KLRC4O43908 158 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 RECKO95980 971 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 USP11P51784 963 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 MAP2K1Q02750 393 aaPredicted RBP7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 COG2Q14746 738 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 NAA25Q14CX7 972 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 PLCB4Q15147 1175 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 PTPROQ16827 1216 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 FAM26FQ5R3K3 315 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 MAP1SQ66K74 1059 aaPredicted RBP7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 RPAINQ86UA6 219 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 FAM133AQ8N9E0 248 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 TLR10Q9BXR5 811 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 TTYH3Q9C0H2 523 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 TBC1D7Q9P0N9 293 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 BAIAP2L1Q9UHR4 511 aa7.57□□□□□ -1.2
SRGAP3-213ENST00000618999 ABCB11O95342 1321 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 SMIM23A6NLE4 172 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 PLA2G6O60733 806 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 ICAM1P05362 532 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 HOXA7P31268 230 aaPredicted RBP7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 PNMA8AQ86V59 439 aaPredicted RBP7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 MCF2L2Q86YR7 1114 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 CCDC13Q8IYE1 715 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 SYCE1Q8N0S2 351 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 BANK1Q8NDB2 785 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 CYFIP2Q96F07 1278 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 RASAL2Q9UJF2 1139 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 GRIN2DO15399 1336 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 BUB1BO60566 1050 aaPredicted RBP7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 SMTNP53814 917 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 IGBP1P78318 339 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 ACTN3Q08043 901 aaPredicted RBP7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 PSMD2Q13200 908 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 ORC2Q13416 577 aaPredicted RBP7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 PPP1R7Q15435 360 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 HERC4Q5GLZ8 1057 aaPredicted RBP7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 KLHDC7AQ5VTJ3 777 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 LRIG3Q6UXM1 1119 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 DAAM2Q86T65 1068 aa7.56□□□□□ -1.2
SRGAP3-213ENST00000618999 RAB17Q9H0T7 212 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms