RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 PDP2Q9P2J9 529 aa12.21□□□□□ -0.46
PCDHA4-204ENST00000618834 TOMM70O94826 608 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 SPATA21Q7Z572 469 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 MB21D1Q8N884 522 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 C19orf60Q96EN9 201 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 NXF1Q9UBU9 619 aaKnown RBP12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 CFAP74Q9C0B2 1584 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 MEIS1O00470 390 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 HSPA2P54652 639 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 SUPT20HQ8NEM7 779 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 KIF2CQ99661 725 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 CROCC2H7BZ55 1655 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 LGALS16A8MUM7 142 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 FGAP02671 866 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 IFT43Q96FT9 208 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 SENP1Q9P0U3 644 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 POU5F1BQ06416 359 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 TRIM71Q2Q1W2 868 aaKnown RBP12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 RABGAP1LQ5R372 815 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 C8orf37Q96NL8 207 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 PCIF1Q9H4Z3 704 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 KLHL31Q9H511 634 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 AKAP10O43572 662 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 GOLGA8HP0CJ92 632 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 SF3B3Q15393 1217 aaKnown RBP12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 GCNAQ96QF7 691 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 INSRP06213 1382 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 MEFVO15553 781 aaPredicted RBP12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 GGPS1O95749 300 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 CLK1P49759 484 aaKnown RBP12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 GFPT1Q06210 699 aaPredicted RBP12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 LARGE2Q8N3Y3 721 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 ARHGEF1Q92888 912 aaKnown RBP12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 CCDC134Q9H6E4 229 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 HPCAL4Q9UM19 191 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 hCG_1984214I3L0E3 225 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 PLOD1Q02809 727 aaPredicted RBP12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 LVRNQ6Q4G3 990 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 ERICH1Q86X53 443 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 ZBED8Q8IZ13 594 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 ZNF713Q8N859 430 aaPredicted RBP12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 BTN2A2Q8WVV5 523 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 RASSF9O75901 435 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 TCF3P15923 654 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 HOXC9P31274 260 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 TCIRG1Q13488 830 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 TRIM25Q14258 630 aaKnown RBP12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 TBC1D10BQ4KMP7 808 aaPredicted RBP12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 OR6B2Q6IFH4 312 aa12.2□□□□□ -0.46
PCDHA4-204ENST00000618834 LAMC3Q9Y6N6 1575 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 MAP2P11137 1827 aaKnown RBP12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 C5orf58C9J3I9 102 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 SOX6P35712 828 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 HSPA13P48723 471 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 ALKBH5Q6P6C2 394 aaKnown RBP12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 NFIBO00712 420 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 ST13P50502 369 aaKnown RBP12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 IYDQ6PHW0 289 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 TRIM69Q86WT6 500 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 AP4S1Q9Y587 144 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 CSADQ9Y600 493 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 MYO1GB0I1T2 1018 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 LAMB3Q13751 1172 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 LRRC36Q1X8D7 754 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 CENPPQ6IPU0 288 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 ARMCX2Q7L311 632 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 PPM1NQ8N819 430 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 PPP1R36Q96LQ0 422 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 ANO9A1A5B4 782 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 COPB2P35606 906 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 NAALADL2Q58DX5 795 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 ABI1Q8IZP0 508 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 PROM2Q8N271 834 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 CEP95Q96GE4 821 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 WNT8AQ9H1J5 351 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 TTLL1O95922 423 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 MLH1P40692 756 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 TRABDQ9H4I3 376 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 SYBUQ9NX95 663 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 TTC7AQ9ULT0 858 aaPredicted RBP12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 HEY1Q9Y5J3 304 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 PRAMEP78395 509 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 ZNF408Q9H9D4 720 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 EIF3HO15372 352 aaKnown RBP eCLIP12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 PLA2G4BP0C869 781 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 DTX3LQ8TDB6 740 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 SLC52A2Q9HAB3 445 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 CASS4Q9NQ75 786 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 HMGB3O15347 200 aaKnown RBP12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 GRK2P25098 689 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 KPNB1Q14974 876 aaKnown RBP12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 CLEC4FQ8N1N0 589 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 MAD2L2Q9UI95 211 aa12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 FAM32AQ9Y421 112 aaKnown RBP12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 USP15Q9Y4E8 981 aaPredicted RBP12.19□□□□□ -0.46
PCDHA4-204ENST00000618834 INO80B-WBP1J3KQ70 363 aa12.18□□□□□ -0.46
PCDHA4-204ENST00000618834 BRAFP15056 766 aa12.18□□□□□ -0.46
PCDHA4-204ENST00000618834 RRM2BQ7LG56 351 aa12.18□□□□□ -0.46
PCDHA4-204ENST00000618834 WDR11Q9BZH6 1224 aa12.18□□□□□ -0.46
PCDHA4-204ENST00000618834 INO80BQ9C086 356 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms