RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 PHKA2P46019 1235 aa24.36■■□□□ 1.49
TRAF4-217ENST00000618771 RARRES1P49788 294 aa24.36■■□□□ 1.49
TRAF4-217ENST00000618771 COL19A1Q14993 1142 aa24.36■■□□□ 1.49
TRAF4-217ENST00000618771 CSPP1Q1MSJ5 1256 aa24.36■■□□□ 1.49
TRAF4-217ENST00000618771 CLLU1OSQ5K130 101 aa24.36■■□□□ 1.49
TRAF4-217ENST00000618771 RNF149Q8NC42 400 aa24.36■■□□□ 1.49
TRAF4-217ENST00000618771 POF1BQ8WVV4 589 aa24.36■■□□□ 1.49
TRAF4-217ENST00000618771 TBC1D32Q96NH3 1257 aa24.36■■□□□ 1.49
TRAF4-217ENST00000618771 TUFT1Q9NNX1 390 aa24.36■■□□□ 1.49
TRAF4-217ENST00000618771 AGPAT5Q9NUQ2 364 aa24.36■■□□□ 1.49
TRAF4-217ENST00000618771 NCK2O43639 380 aa24.35■■□□□ 1.49
TRAF4-217ENST00000618771 DGAT1O75907 488 aa24.35■■□□□ 1.49
TRAF4-217ENST00000618771 SPATA31C1P0DKV0 1188 aa24.35■■□□□ 1.49
TRAF4-217ENST00000618771 SKIP12755 728 aa24.35■■□□□ 1.49
TRAF4-217ENST00000618771 MXD4Q14582 209 aaPredicted RBP24.35■■□□□ 1.49
TRAF4-217ENST00000618771 LRRC55Q6ZSA7 311 aa24.35■■□□□ 1.49
TRAF4-217ENST00000618771 THNSL1Q8IYQ7 743 aa24.35■■□□□ 1.49
TRAF4-217ENST00000618771 HELQQ8TDG4 1101 aa24.35■■□□□ 1.49
TRAF4-217ENST00000618771 PIGOQ8TEQ8 1089 aa24.35■■□□□ 1.49
TRAF4-217ENST00000618771 MINDY3Q9H8M7 445 aa24.35■■□□□ 1.49
TRAF4-217ENST00000618771 CLDND1Q9NY35 253 aa24.35■■□□□ 1.49
TRAF4-217ENST00000618771 FGF18O76093 207 aa24.34■■□□□ 1.49
TRAF4-217ENST00000618771 XRCC6P12956 609 aaKnown RBP eCLIP24.34■■□□□ 1.493e-10■■□□□ 12.6
TRAF4-217ENST00000618771 RAB27AP51159 221 aa24.34■■□□□ 1.49
TRAF4-217ENST00000618771 UBE3AQ05086 875 aa24.34■■□□□ 1.49
TRAF4-217ENST00000618771 HYAL1Q12794 435 aa24.34■■□□□ 1.49
TRAF4-217ENST00000618771 NBR1Q14596 966 aa24.34■■□□□ 1.49
TRAF4-217ENST00000618771 CATSPER3Q86XQ3 398 aa24.34■■□□□ 1.49
TRAF4-217ENST00000618771 ERMNQ8TAM6 284 aa24.34■■□□□ 1.49
TRAF4-217ENST00000618771 PPP2R3CQ969Q6 453 aa24.34■■□□□ 1.49
TRAF4-217ENST00000618771 FAM105AQ9NUU6 356 aa24.34■■□□□ 1.49
TRAF4-217ENST00000618771 FAM50BQ9Y247 325 aa24.34■■□□□ 1.49
TRAF4-217ENST00000618771 A0A087WWV3 80 aa24.33■■□□□ 1.49
TRAF4-217ENST00000618771 MED24O75448 989 aa24.33■■□□□ 1.49
TRAF4-217ENST00000618771 IRS1P35568 1242 aa24.33■■□□□ 1.49
TRAF4-217ENST00000618771 MCM2P49736 904 aa24.33■■□□□ 1.49
TRAF4-217ENST00000618771 POLR3CQ9BUI4 534 aaPredicted RBP24.33■■□□□ 1.49
TRAF4-217ENST00000618771 C5orf42Q9H799 3197 aa24.32■■□□□ 1.48
TRAF4-217ENST00000618771 USO1O60763 962 aaKnown RBP24.32■■□□□ 1.48
TRAF4-217ENST00000618771 TFDP1Q14186 410 aa24.32■■□□□ 1.48
TRAF4-217ENST00000618771 KCNT2Q6UVM3 1135 aa24.32■■□□□ 1.48
TRAF4-217ENST00000618771 LPPQ93052 612 aa24.32■■□□□ 1.48
TRAF4-217ENST00000618771 MRPL9Q9BYD2 267 aaKnown RBP24.32■■□□□ 1.48
TRAF4-217ENST00000618771 TLR9Q9NR96 1032 aa24.32■■□□□ 1.48
TRAF4-217ENST00000618771 DCXO43602 365 aa24.31■■□□□ 1.48
TRAF4-217ENST00000618771 ZNF623O75123 536 aa24.31■■□□□ 1.48
TRAF4-217ENST00000618771 ERLIN2O94905 339 aa24.31■■□□□ 1.48
TRAF4-217ENST00000618771 RPA1P27694 616 aa24.31■■□□□ 1.48
TRAF4-217ENST00000618771 GTF2F1P35269 517 aaKnown RBP eCLIP24.31■■□□□ 1.481e-10■■■■□ 26.4
TRAF4-217ENST00000618771 ARL2P36404 184 aa24.31■■□□□ 1.48
TRAF4-217ENST00000618771 TOB1P50616 345 aaPredicted RBP24.31■■□□□ 1.48
TRAF4-217ENST00000618771 PTENP60484 403 aa24.31■■□□□ 1.48
TRAF4-217ENST00000618771 ZP2Q05996 745 aa24.31■■□□□ 1.48
TRAF4-217ENST00000618771 CTC1Q2NKJ3 1217 aa24.31■■□□□ 1.48
TRAF4-217ENST00000618771 POTEGQ6S5H5 508 aa24.31■■□□□ 1.48
TRAF4-217ENST00000618771 ADGRD2Q7Z7M1 963 aa24.31■■□□□ 1.48
TRAF4-217ENST00000618771 C4orf32Q8N8J7 132 aa24.31■■□□□ 1.48
TRAF4-217ENST00000618771 ASAP3Q8TDY4 903 aa24.31■■□□□ 1.48
TRAF4-217ENST00000618771 RSPH1Q8WYR4 309 aa24.31■■□□□ 1.48
TRAF4-217ENST00000618771 ZNF558Q96NG5 402 aa24.31■■□□□ 1.48
TRAF4-217ENST00000618771 NACC1Q96RE7 527 aa24.31■■□□□ 1.48
TRAF4-217ENST00000618771 IGFLR1Q9H665 355 aa24.31■■□□□ 1.48
TRAF4-217ENST00000618771 DBR1Q9UK59 544 aaKnown RBP24.31■■□□□ 1.48
TRAF4-217ENST00000618771 GJB2P29033 226 aa24.3■■□□□ 1.48
TRAF4-217ENST00000618771 PPM1AP35813 382 aa24.3■■□□□ 1.48
TRAF4-217ENST00000618771 LTBRP36941 435 aa24.3■■□□□ 1.48
TRAF4-217ENST00000618771 PBX3P40426 434 aa24.3■■□□□ 1.48
TRAF4-217ENST00000618771 FXR2P51116 673 aaKnown RBP eCLIP24.3■■□□□ 1.48
TRAF4-217ENST00000618771 CAPSQ13938 189 aa24.3■■□□□ 1.48
TRAF4-217ENST00000618771 LONRF3Q496Y0 759 aa24.3■■□□□ 1.48
TRAF4-217ENST00000618771 HAUS3Q68CZ6 603 aa24.3■■□□□ 1.48
TRAF4-217ENST00000618771 MCTP1Q6DN14 999 aa24.3■■□□□ 1.48
TRAF4-217ENST00000618771 MICAL1Q8TDZ2 1067 aa24.3■■□□□ 1.48
TRAF4-217ENST00000618771 POLR3FQ9H1D9 316 aaPredicted RBP24.3■■□□□ 1.48
TRAF4-217ENST00000618771 PRKAG3Q9UGI9 489 aa24.3■■□□□ 1.48
TRAF4-217ENST00000618771 PCDHB6Q9Y5E3 794 aa24.3■■□□□ 1.48
TRAF4-217ENST00000618771 PCDHB2Q9Y5E7 798 aa24.3■■□□□ 1.48
TRAF4-217ENST00000618771 PCDHGC5Q9Y5F6 944 aa24.3■■□□□ 1.48
TRAF4-217ENST00000618771 GLRA2P23416 452 aa24.29■■□□□ 1.48
TRAF4-217ENST00000618771 HOXA11P31270 313 aaPredicted RBP24.29■■□□□ 1.48
TRAF4-217ENST00000618771 POU5F1BQ06416 359 aa24.29■■□□□ 1.48
TRAF4-217ENST00000618771 PTGDRQ13258 359 aa24.29■■□□□ 1.48
TRAF4-217ENST00000618771 PCBP1Q15365 356 aaKnown RBP eCLIP24.29■■□□□ 1.484e-7■■■■■ 32.7
TRAF4-217ENST00000618771 CLUL1Q15846 466 aa24.29■■□□□ 1.48
TRAF4-217ENST00000618771 GLB1LQ6UWU2 654 aa24.29■■□□□ 1.48
TRAF4-217ENST00000618771 IFNLR1Q8IU57 520 aaPredicted RBP24.29■■□□□ 1.48
TRAF4-217ENST00000618771 MRPS27Q92552 414 aaKnown RBP24.29■■□□□ 1.48
TRAF4-217ENST00000618771 LZTS1Q9Y250 596 aa24.29■■□□□ 1.48
TRAF4-217ENST00000618771 MEIS3P2A8K0S8 358 aa24.28■■□□□ 1.48
TRAF4-217ENST00000618771 INO80B-WBP1J3KQ70 363 aa24.28■■□□□ 1.48
TRAF4-217ENST00000618771 PLCB3Q01970 1234 aa24.28■■□□□ 1.48
TRAF4-217ENST00000618771 ADHFE1Q8IWW8 467 aa24.28■■□□□ 1.48
TRAF4-217ENST00000618771 MCPH1Q8NEM0 835 aa24.28■■□□□ 1.48
TRAF4-217ENST00000618771 PGBD4Q96DM1 585 aa24.28■■□□□ 1.48
TRAF4-217ENST00000618771 SPG21Q9NZD8 308 aa24.28■■□□□ 1.48
TRAF4-217ENST00000618771 PUF60Q9UHX1 559 aaKnown RBP24.28■■□□□ 1.48
TRAF4-217ENST00000618771 INPP5FQ9Y2H2 1132 aa24.28■■□□□ 1.48
TRAF4-217ENST00000618771 TRIOO75962 3097 aa24.28■■□□□ 1.48
TRAF4-217ENST00000618771 TDRD15B5MCY1 1934 aaKnown RBP24.27■■□□□ 1.48
TRAF4-217ENST00000618771 C19orf67A6NJJ6 358 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms