RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 XXYLT1Q8NBI6 393 aa13.49□□□□□ -0.25
CIITA-212ENST00000618207 MKNK1Q9BUB5 465 aa13.49□□□□□ -0.25
CIITA-212ENST00000618207 TMEM206Q9H813 350 aa13.49□□□□□ -0.25
CIITA-212ENST00000618207 KMT5AQ9NQR1 393 aa13.49□□□□□ -0.25
CIITA-212ENST00000618207 TOPORSQ9NS56 1045 aaPredicted RBP13.49□□□□□ -0.25
CIITA-212ENST00000618207 MYH9P35579 1960 aaKnown RBP13.48□□□□□ -0.25
CIITA-212ENST00000618207 LRRIQ3A6PVS8 624 aaPredicted RBP13.48□□□□□ -0.25
CIITA-212ENST00000618207 H3BQF6 201 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 KCNK3O14649 394 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 USP2O75604 605 aaPredicted RBP13.48□□□□□ -0.25
CIITA-212ENST00000618207 ADRB2P07550 413 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 DLATP10515 647 aaKnown RBP13.48□□□□□ -0.25
CIITA-212ENST00000618207 KCNA2P16389 499 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 SOX5P35711 763 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 JAM2P57087 298 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 SLC20A2Q08357 652 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 DMP1Q13316 513 aaPredicted RBP13.48□□□□□ -0.25
CIITA-212ENST00000618207 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.48□□□□□ -0.25
CIITA-212ENST00000618207 VPS36Q86VN1 386 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 RNF10Q8N5U6 811 aaKnown RBP13.48□□□□□ -0.25
CIITA-212ENST00000618207 LNX1Q8TBB1 728 aaPredicted RBP13.48□□□□□ -0.25
CIITA-212ENST00000618207 BICD1Q96G01 975 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 STRA6Q9BX79 667 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 JPH1Q9HDC5 661 aaPredicted RBP13.48□□□□□ -0.25
CIITA-212ENST00000618207 OSGEPQ9NPF4 335 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 TAS2R14Q9NYV8 317 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 APEX2Q9UBZ4 518 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 C19orf81C9J6K1 198 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 SFNP31947 248 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 ACTR2P61160 394 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 TTLL12Q14166 644 aaPredicted RBP13.48□□□□□ -0.25
CIITA-212ENST00000618207 WDR78Q5VTH9 848 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 LMBRD2Q68DH5 695 aaPredicted RBP13.48□□□□□ -0.25
CIITA-212ENST00000618207 HDXQ7Z353 690 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 NCAPG2Q86XI2 1143 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 PPM1KQ8N3J5 372 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 TXLNBQ8N3L3 684 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 OTUD5Q96G74 571 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 INPP4AQ96PE3 977 aaPredicted RBP13.48□□□□□ -0.25
CIITA-212ENST00000618207 SLC9A2Q9UBY0 812 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 AFG3L2Q9Y4W6 797 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 PHIPQ8WWQ0 1821 aa13.48□□□□□ -0.25
CIITA-212ENST00000618207 ESYT3A0FGR9 886 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 ZSCAN5CA6NGD5 496 aaPredicted RBP13.47□□□□□ -0.25
CIITA-212ENST00000618207 ERICH4A6NGS2 130 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 CNGA1P29973 690 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 ADSSP30520 456 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 SMTNP53814 917 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 GALCP54803 685 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 PRKCEQ02156 737 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 GOLGA5Q8TBA6 731 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 SLC20A1Q8WUM9 679 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 ELP3Q9H9T3 547 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 MAP3K20Q9NYL2 800 aaKnown RBP13.47□□□□□ -0.25
CIITA-212ENST00000618207 H2AFZP0C0S5 128 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 GHRHRQ02643 423 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 TERF2Q15554 542 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 SUPT20HL1Q3ZLR7 823 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 H2AFVQ71UI9 128 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 POMGNT1Q8WZA1 660 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 TMEM143Q96AN5 459 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 CLMNQ96JQ2 1002 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 STK33Q9BYT3 514 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 GINM1Q9NU53 330 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 HOXC10Q9NYD6 342 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 TBX20Q9UMR3 447 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 BZW2Q9Y6E2 419 aaKnown RBP13.47□□□□□ -0.25
CIITA-212ENST00000618207 ADGRA3Q8IWK6 1321 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 LTBP3Q9NS15 1303 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 RLFQ13129 1914 aa13.47□□□□□ -0.25
CIITA-212ENST00000618207 WDR81Q562E7 1941 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 UBE4BO95155 1302 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 GTPBP10A4D1E9 387 aaKnown RBP13.46□□□□□ -0.25
CIITA-212ENST00000618207 HNRNPDLO14979 420 aaKnown RBP13.46□□□□□ -0.25
CIITA-212ENST00000618207 CALCAP01258 141 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 FERP16591 822 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 TNFAIP3P21580 790 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 INTS8Q75QN2 995 aaKnown RBP13.46□□□□□ -0.25
CIITA-212ENST00000618207 DAAM2Q86T65 1068 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 KLHL7Q8IXQ5 586 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 GPC2Q8N158 579 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 TMEM161BQ8NDZ6 487 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.46□□□□□ -0.25
CIITA-212ENST00000618207 GPR88Q9GZN0 384 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 PARP14Q460N5 1801 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 SSC5DA1L4H1 1573 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 PFASO15067 1338 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 LMNB1P20700 586 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 PSEN1P49768 467 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 MXI1P50539 228 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 GTF2BQ00403 316 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 PPP2R5AQ15172 486 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 SNRNP35Q16560 246 aaKnown RBP13.46□□□□□ -0.25
CIITA-212ENST00000618207 OTUD6AQ7L8S5 288 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 RIN2Q8WYP3 895 aaPredicted RBP13.46□□□□□ -0.25
CIITA-212ENST00000618207 ATP6V0A1Q93050 837 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 GPRASP2Q96D09 838 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 RNF181Q9P0P0 153 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 BTBD7Q9P203 1132 aa13.46□□□□□ -0.25
CIITA-212ENST00000618207 SNCAIPQ9Y6H5 919 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms