RNA–Protein interactions for RNA: ENST00000618002.4

RPH3AL-222, Transcript of rabphilin 3A like (without C2 domains), humanhuman

APPRIS P2 TSL 5 BASIC

Gene RPH3AL, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-222ENST00000618002 TRIM49P0CI25 452 aa18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 TRIM49CP0CI26 452 aa18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 ATP2B4P23634 1241 aa18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 RINT1Q6NUQ1 792 aa18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 INTS2Q9H0H0 1204 aaKnown RBP18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 ABCF3Q9NUQ8 709 aa18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 RABGAP1Q9Y3P9 1069 aa18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 EML1O00423 815 aa18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 PPP1R12BO60237 982 aaPredicted RBP18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 CHRNA3P32297 505 aa18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 PSEN1P49768 467 aa18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 SNAP25P60880 206 aa18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 PNMA8AQ86V59 439 aaPredicted RBP18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 MYCT1Q8N699 235 aa18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 CYP2W1Q8TAV3 490 aa18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 PIGOQ8TEQ8 1089 aa18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 TBC1D22AQ8WUA7 517 aa18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 AGAP1Q9UPQ3 857 aa18.71■□□□□ 0.59
RPH3AL-222ENST00000618002 FOXN3O00409 490 aaPredicted RBP18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 MSH4O15457 936 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 EYA4O95677 639 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 AP3B2Q13367 1082 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 AUHQ13825 339 aaKnown RBP18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 CCDC38Q502W7 563 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 EIF2AK1Q9BQI3 630 aaKnown RBP18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 APEX2Q9UBZ4 518 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 POLLQ9UGP5 575 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 PCYOX1Q9UHG3 505 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 VAV3Q9UKW4 847 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 RIPK2O43353 540 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 LRRN2O75325 713 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 RPSAP08865 295 aaKnown RBP18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 CTNNA2P26232 953 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 GTF2IP78347 998 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 CTTNQ14247 550 aaKnown RBP18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 CLUL1Q15846 466 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 CNGA2Q16280 664 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 TNFAIP8L3Q5GJ75 292 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 PHLDB3Q6NSJ2 640 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 BARGINQ6ZT62 677 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 CNBD1Q8NA66 436 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 SLC20A1Q8WUM9 679 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 TMEM109Q9BVC6 243 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 CCDC113Q9H0I3 377 aa18.7■□□□□ 0.58
RPH3AL-222ENST00000618002 TMEM110-MUSTN1A8MSY1 372 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 CYP2J2P51589 502 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 CCDC137Q6PK04 289 aaKnown RBP18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 FAM20AQ96MK3 541 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 CTTNBP2NLQ9P2B4 639 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 MTRF1LQ9UGC7 380 aaKnown RBP18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 CHORDC1Q9UHD1 332 aaPredicted RBP18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 GGT7Q9UJ14 662 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 SYNGAP1Q96PV0 1343 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 ANKRD63C9JTQ0 380 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 PODXLO00592 558 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 RASGRF2O14827 1237 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 ZBTB39O15060 712 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 EIF3DO15371 548 aaKnown RBP eCLIP18.69■□□□□ 0.581e-6■■■■□ 23.4
RPH3AL-222ENST00000618002 FAM13AO94988 1023 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 GAP43P17677 238 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 AFF2P51816 1311 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 ZNF831Q5JPB2 1677 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 SLC30A10Q6XR72 485 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 RHOT2Q8IXI1 618 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 RPGRQ92834 1020 aaKnown RBP18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 AGPAT1Q99943 283 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 CD2APQ9Y5K6 639 aa18.69■□□□□ 0.58
RPH3AL-222ENST00000618002 TCRBV7S2A1N4TA0A589 114 aa18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 KIF22Q14807 665 aa18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 SHROOM1Q2M3G4 852 aaPredicted RBP18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 BTNL9Q6UXG8 535 aa18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 UBL4BQ8N7F7 174 aa18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 STAMBPL1Q96FJ0 436 aa18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 ZSWIM1Q9BR11 485 aa18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 POLR3CQ9BUI4 534 aaPredicted RBP18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 MIF4GDA9UHW6 222 aaKnown RBP18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 SNX3O60493 162 aa18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 FTLP02792 175 aaPredicted RBP18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 RARGP13631 454 aa18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 TAL1P17542 331 aaPredicted RBP18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 CLNS1AP54105 237 aaKnown RBP18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 RIPK1Q13546 671 aa18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 NFIL3Q16649 462 aa18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 CROCCP2Q86T23 111 aa18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 EXOC3L1Q86VI1 746 aa18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 KIRREL3Q8IZU9 778 aa18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 MKNK1Q9BUB5 465 aa18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 USP40Q9NVE5 1235 aa18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 STRCQ7RTU9 1775 aa18.68■□□□□ 0.58
RPH3AL-222ENST00000618002 ECM2O94769 699 aaPredicted RBP18.67■□□□□ 0.58
RPH3AL-222ENST00000618002 UBOX5O94941 541 aa18.67■□□□□ 0.58
RPH3AL-222ENST00000618002 ALAS1P13196 640 aa18.67■□□□□ 0.58
RPH3AL-222ENST00000618002 HSPA6P17066 643 aa18.67■□□□□ 0.58
RPH3AL-222ENST00000618002 PEX5P50542 639 aa18.67■□□□□ 0.58
RPH3AL-222ENST00000618002 HADHBP55084 474 aaKnown RBP18.67■□□□□ 0.58
RPH3AL-222ENST00000618002 C11orf63Q6NUN7 778 aa18.67■□□□□ 0.58
RPH3AL-222ENST00000618002 CRELD2Q6UXH1 353 aaPredicted RBP18.67■□□□□ 0.58
RPH3AL-222ENST00000618002 TBC1D16Q8TBP0 767 aa18.67■□□□□ 0.58
RPH3AL-222ENST00000618002 PARP2Q9UGN5 583 aa18.67■□□□□ 0.58
RPH3AL-222ENST00000618002 BCS1LQ9Y276 419 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms