RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 RAVER2Q9HCJ3 691 aaKnown RBP8.68□□□□□ -1.02
MALAT1-208ENST00000616527 AGO4Q9HCK5 861 aaKnown RBP8.68□□□□□ -1.02
MALAT1-208ENST00000616527 KCNH7Q9NS40 1196 aa8.68□□□□□ -1.02
MALAT1-208ENST00000616527 TAB2Q9NYJ8 693 aa8.68□□□□□ -1.02
MALAT1-208ENST00000616527 COL20A1Q9P218 1284 aa8.68□□□□□ -1.02
MALAT1-208ENST00000616527 DBR1Q9UK59 544 aaKnown RBP8.68□□□□□ -1.02
MALAT1-208ENST00000616527 ZNF214Q9UL59 606 aaPredicted RBP8.68□□□□□ -1.02
MALAT1-208ENST00000616527 FAM184BQ9ULE4 1060 aa8.68□□□□□ -1.02
MALAT1-208ENST00000616527 MAPK8IP1Q9UQF2 711 aa8.68□□□□□ -1.02
MALAT1-208ENST00000616527 ZHX2Q9Y6X8 837 aa8.68□□□□□ -1.02
MALAT1-208ENST00000616527 SSC5DA1L4H1 1573 aa8.68□□□□□ -1.02
MALAT1-208ENST00000616527 DICER1Q9UPY3 1922 aaKnown RBP8.68□□□□□ -1.02
MALAT1-208ENST00000616527 CXCL11O14625 94 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 ATXN7O15265 892 aaPredicted RBP8.67□□□□□ -1.02
MALAT1-208ENST00000616527 CTIFO43310 598 aaKnown RBP8.67□□□□□ -1.02
MALAT1-208ENST00000616527 OIP5O43482 229 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 PPP1R12BO60237 982 aaPredicted RBP8.67□□□□□ -1.02
MALAT1-208ENST00000616527 ARP10275 920 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 BMP4P12644 408 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 ALAS1P13196 640 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 CASP14P31944 242 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 NOS2P35228 1153 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 COPB2P35606 906 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 JAK3P52333 1124 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 SNRPFP62306 86 aaKnown RBP8.67□□□□□ -1.02
MALAT1-208ENST00000616527 ETF1P62495 437 aaKnown RBP8.67□□□□□ -1.02
MALAT1-208ENST00000616527 MRPS9P82933 396 aaKnown RBP8.67□□□□□ -1.02
MALAT1-208ENST00000616527 ZBED6P86452 979 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 PPATQ06203 517 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 TBC1D8BQ0IIM8 1120 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 ALCAMQ13740 583 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 DOCK1Q14185 1865 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 PGM5Q15124 567 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 KNOP1Q1ED39 458 aaKnown RBP8.67□□□□□ -1.02
MALAT1-208ENST00000616527 VWA3BQ502W6 1294 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 HSP90AA4PQ58FG1 418 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 MUM1L1Q5H9M0 696 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 CYP26C1Q6V0L0 522 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 RNF207Q6ZRF8 634 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 PHLPP2Q6ZVD8 1323 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 STXBP4Q6ZWJ1 553 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 VSIG10LQ86VR7 867 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 SLC9A9Q8IVB4 645 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 SLC17A8Q8NDX2 589 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 DNERQ8NFT8 737 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 ZDHHC1Q8WTX9 485 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 SCFD1Q8WVM8 642 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 GJA10Q969M2 543 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 DCPSQ96C86 337 aaKnown RBP8.67□□□□□ -1.02
MALAT1-208ENST00000616527 ATG4CQ96DT6 458 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 INPP4AQ96PE3 977 aaPredicted RBP8.67□□□□□ -1.02
MALAT1-208ENST00000616527 IWS1Q96ST2 819 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 NOC4LQ9BVI4 516 aaKnown RBP8.67□□□□□ -1.02
MALAT1-208ENST00000616527 UNC45AQ9H3U1 944 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 ZSWIM4Q9H7M6 989 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 PXMP2Q9NR77 195 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 RNF146Q9NTX7 359 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 ABHD10Q9NUJ1 306 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 CGNQ9P2M7 1197 aaKnown RBP8.67□□□□□ -1.02
MALAT1-208ENST00000616527 FBXO40Q9UH90 709 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 PPP2R2CQ9Y2T4 447 aa8.67□□□□□ -1.02
MALAT1-208ENST00000616527 LUC7L2Q9Y383 392 aaKnown RBP8.67□□□□□ -1.02
MALAT1-208ENST00000616527 NFASCO94856 1347 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 USP27XA6NNY8 438 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 C2CD2LO14523 706 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 CETN3O15182 167 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 SLC16A3O15427 465 aaKnown RBP8.66□□□□□ -1.02
MALAT1-208ENST00000616527 DKC1O60832 514 aaKnown RBP eCLIP8.66□□□□□ -1.02
MALAT1-208ENST00000616527 TBCAO75347 108 aaKnown RBP8.66□□□□□ -1.02
MALAT1-208ENST00000616527 SSBP05455 408 aaKnown RBP eCLIP8.66□□□□□ -1.02
MALAT1-208ENST00000616527 KRT18P05783 430 aaKnown RBP8.66□□□□□ -1.02
MALAT1-208ENST00000616527 CCDC175P0C221 793 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 TAL1P17542 331 aaPredicted RBP8.66□□□□□ -1.02
MALAT1-208ENST00000616527 RPL13P26373 211 aaKnown RBP8.66□□□□□ -1.02
MALAT1-208ENST00000616527 CCND2P30279 289 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 KRT9P35527 623 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 MTIF2P46199 727 aaKnown RBP8.66□□□□□ -1.02
MALAT1-208ENST00000616527 IREB2P48200 963 aaKnown RBP8.66□□□□□ -1.02
MALAT1-208ENST00000616527 FXR1P51114 621 aaKnown RBP eCLIP8.66□□□□□ -1.02
MALAT1-208ENST00000616527 HMGCS2P54868 508 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 ADKP55263 362 aaKnown RBP8.66□□□□□ -1.02
MALAT1-208ENST00000616527 PSMC6P62333 389 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 CTBSQ01459 385 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 PABPC4Q13310 644 aaKnown RBP eCLIP8.66□□□□□ -1.02
MALAT1-208ENST00000616527 OCLNQ16625 522 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 ZNF746Q6NUN9 644 aaPredicted RBP8.66□□□□□ -1.02
MALAT1-208ENST00000616527 TRIM65Q6PJ69 517 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.66□□□□□ -1.02
MALAT1-208ENST00000616527 SND1Q7KZF4 910 aaKnown RBP eCLIP8.66□□□□□ -1.02
MALAT1-208ENST00000616527 FRMD5Q7Z6J6 570 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 NLRX1Q86UT6 975 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 TRIM59Q8IWR1 403 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 C4orf19Q8IY42 314 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 CCDC170Q8IYT3 715 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 CPXCR1Q8N123 301 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 GOLGA5Q8TBA6 731 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 NSUN6Q8TEA1 469 aaKnown RBP8.66□□□□□ -1.02
MALAT1-208ENST00000616527 SYN2Q92777 582 aaPredicted RBP8.66□□□□□ -1.02
MALAT1-208ENST00000616527 KCNN1Q92952 543 aa8.66□□□□□ -1.02
MALAT1-208ENST00000616527 ZKSCAN4Q969J2 545 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms