RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 KCTD17Q8N5Z5 321 aa20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 CLP1Q92989 425 aaKnown RBP20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 RUSC1Q9BVN2 902 aa20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 TRAIPQ9BWF2 469 aa20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 RNF19AQ9NV58 838 aa20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 FBXO2Q9UK22 296 aaPredicted RBP20.03■□□□□ 0.8
SEMA3B-211ENST00000612509 HOXA2O43364 376 aa20.02■□□□□ 0.8
SEMA3B-211ENST00000612509 GTPBP6O43824 516 aaPredicted RBP20.02■□□□□ 0.8
SEMA3B-211ENST00000612509 MARCKSP29966 332 aaPredicted RBP20.02■□□□□ 0.8
SEMA3B-211ENST00000612509 UBA7P41226 1012 aa20.02■□□□□ 0.8
SEMA3B-211ENST00000612509 RAB27AP51159 221 aa20.02■□□□□ 0.8
SEMA3B-211ENST00000612509 FOXD4L5Q5VV16 416 aaPredicted RBP20.02■□□□□ 0.8
SEMA3B-211ENST00000612509 RNF169Q8NCN4 708 aa20.02■□□□□ 0.8
SEMA3B-211ENST00000612509 FOXD4L4Q8WXT5 416 aaPredicted RBP20.02■□□□□ 0.8
SEMA3B-211ENST00000612509 PLIN2Q99541 437 aa20.02■□□□□ 0.8
SEMA3B-211ENST00000612509 FAM105AQ9NUU6 356 aa20.02■□□□□ 0.8
SEMA3B-211ENST00000612509 MTCH2Q9Y6C9 303 aa20.02■□□□□ 0.8
SEMA3B-211ENST00000612509 MORC2Q9Y6X9 1032 aaPredicted RBP20.02■□□□□ 0.8
SEMA3B-211ENST00000612509 F13A1P00488 732 aa20.01■□□□□ 0.79
SEMA3B-211ENST00000612509 ZSCAN22P10073 491 aaPredicted RBP20.01■□□□□ 0.79
SEMA3B-211ENST00000612509 POU3F3P20264 500 aaPredicted RBP20.01■□□□□ 0.79
SEMA3B-211ENST00000612509 HOXA11P31270 313 aaPredicted RBP20.01■□□□□ 0.79
SEMA3B-211ENST00000612509 NASPP49321 788 aaPredicted RBP20.01■□□□□ 0.79
SEMA3B-211ENST00000612509 PKP1Q13835 747 aa20.01■□□□□ 0.79
SEMA3B-211ENST00000612509 PPP2R5AQ15172 486 aa20.01■□□□□ 0.79
SEMA3B-211ENST00000612509 AMHR2Q16671 573 aa20.01■□□□□ 0.79
SEMA3B-211ENST00000612509 ZBTB8OSQ8IWT0 167 aa20.01■□□□□ 0.79
SEMA3B-211ENST00000612509 KIFAP3Q92845 792 aa20.01■□□□□ 0.79
SEMA3B-211ENST00000612509 CALML4Q96GE6 196 aa20.01■□□□□ 0.79
SEMA3B-211ENST00000612509 TMEM117Q9H0C3 514 aa20.01■□□□□ 0.79
SEMA3B-211ENST00000612509 ATG2AQ2TAZ0 1938 aa20.01■□□□□ 0.79
SEMA3B-211ENST00000612509 C5orf67F2Z3F1 127 aa20■□□□□ 0.79
SEMA3B-211ENST00000612509 EOMESO95936 686 aa20■□□□□ 0.79
SEMA3B-211ENST00000612509 SKIP12755 728 aa20■□□□□ 0.79
SEMA3B-211ENST00000612509 AXLP30530 894 aa20■□□□□ 0.79
SEMA3B-211ENST00000612509 BMPR1AP36894 532 aa20■□□□□ 0.79
SEMA3B-211ENST00000612509 NAMPTP43490 491 aa20■□□□□ 0.79
SEMA3B-211ENST00000612509 KARSQ15046 597 aaKnown RBP20■□□□□ 0.79
SEMA3B-211ENST00000612509 CLLU1OSQ5K130 101 aa20■□□□□ 0.79
SEMA3B-211ENST00000612509 RINT1Q6NUQ1 792 aa20■□□□□ 0.79
SEMA3B-211ENST00000612509 C1orf186Q6ZWK4 172 aa20■□□□□ 0.79
SEMA3B-211ENST00000612509 ABI1Q8IZP0 508 aa20■□□□□ 0.79
SEMA3B-211ENST00000612509 MICALL1Q8N3F8 863 aa20■□□□□ 0.79
SEMA3B-211ENST00000612509 RASSF8Q8NHQ8 419 aa20■□□□□ 0.79
SEMA3B-211ENST00000612509 CCDC51Q96ER9 411 aa20■□□□□ 0.79
SEMA3B-211ENST00000612509 CSRNP2Q9H175 543 aa20■□□□□ 0.79
SEMA3B-211ENST00000612509 C2orf40Q9H1Z8 148 aa20■□□□□ 0.79
SEMA3B-211ENST00000612509 HCSTQ9UBK5 93 aa20■□□□□ 0.79
SEMA3B-211ENST00000612509 SRPRBQ9Y5M8 271 aaKnown RBP20■□□□□ 0.79
SEMA3B-211ENST00000612509 PRRC2BQ5JSZ5 2229 aaKnown RBP20■□□□□ 0.79
SEMA3B-211ENST00000612509 H3BNC9 293 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 HIP1RO75146 1068 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 SSBP05455 408 aaKnown RBP eCLIP19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 PLA2G4BP0C869 781 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 SLC12A3P55017 1021 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 GPM6BQ13491 265 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 SLC39A14Q15043 492 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 UBXN11Q5T124 520 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 NOTUMQ6P988 496 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 PPP4R3CPQ6ZMV5 832 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 LRRC43Q8N309 656 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 SYT2Q8N9I0 419 aaPredicted RBP19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 DEPTORQ8TB45 409 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 HELQQ8TDG4 1101 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 LRRC15Q8TF66 581 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 CPB2Q96IY4 423 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 IFT74Q96LB3 600 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 ZNF396Q96N95 335 aaPredicted RBP19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 CASD1Q96PB1 797 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 C11orf84Q9BUA3 381 aaPredicted RBP19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 KIFC3Q9BVG8 833 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 PLVAPQ9BX97 442 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 CCSER1Q9C0I3 900 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 POLD4Q9HCU8 107 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 PCDHB2Q9Y5E7 798 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 EYSQ5T1H1 3165 aa19.99■□□□□ 0.79
SEMA3B-211ENST00000612509 MYH11P35749 1972 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 B4GALT5O43286 388 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 ZNF623O75123 536 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 RB1P06400 928 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 ARF4P18085 180 aaPredicted RBP19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 PLCG1P19174 1290 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 GUCY2CP25092 1073 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 MAPK7Q13164 816 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 STK38Q15208 465 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 SPECC1Q5M775 1068 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 DAW1Q8N136 415 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 PPM1EQ8WY54 764 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 SYMPKQ92797 1274 aaKnown RBP19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 LPPQ93052 612 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 PRIMPOLQ96LW4 560 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 DRC1Q96MC2 740 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 CLIC6Q96NY7 704 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 TIPINQ9BVW5 301 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 CCDC113Q9H0I3 377 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 PRMT7Q9NVM4 692 aaPredicted RBP19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 LMCD1Q9NZU5 365 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 CNTNAP2Q9UHC6 1331 aa19.98■□□□□ 0.79
SEMA3B-211ENST00000612509 TRANK1O15050 2925 aa19.97■□□□□ 0.79
SEMA3B-211ENST00000612509 MEIS3P2A8K0S8 358 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms