RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 CCDC169A6NNP5 214 aa30.5■■■□□ 2.47
CSPG5-205ENST00000610462 DDX3XO00571 662 aaKnown RBP eCLIP30.5■■■□□ 2.47
CSPG5-205ENST00000610462 DMP1Q13316 513 aaPredicted RBP30.5■■■□□ 2.47
CSPG5-205ENST00000610462 MEI1Q5TIA1 1274 aa30.5■■■□□ 2.47
CSPG5-205ENST00000610462 CCDC181Q5TID7 509 aa30.5■■■□□ 2.47
CSPG5-205ENST00000610462 PSMB7Q99436 277 aa30.5■■■□□ 2.47
CSPG5-205ENST00000610462 C17orf75Q9HAS0 396 aa30.5■■■□□ 2.47
CSPG5-205ENST00000610462 INTUQ9ULD6 942 aa30.5■■■□□ 2.47
CSPG5-205ENST00000610462 GRID2IPA4D2P6 1211 aa30.49■■■□□ 2.47
CSPG5-205ENST00000610462 IFI16Q16666 785 aaKnown RBP30.49■■■□□ 2.47
CSPG5-205ENST00000610462 SPATA4Q8NEY3 305 aa30.49■■■□□ 2.47
CSPG5-205ENST00000610462 SPIRE2Q8WWL2 714 aa30.49■■■□□ 2.47
CSPG5-205ENST00000610462 RNF14Q9UBS8 474 aa30.49■■■□□ 2.47
CSPG5-205ENST00000610462 MYH9P35579 1960 aaKnown RBP30.49■■■□□ 2.47
CSPG5-205ENST00000610462 OTOFQ9HC10 1997 aa30.49■■■□□ 2.47
CSPG5-205ENST00000610462 A0A0G2JMZ2 1700 aa30.48■■■□□ 2.47
CSPG5-205ENST00000610462 CCDC172P0C7W6 258 aa30.48■■■□□ 2.47
CSPG5-205ENST00000610462 PAFAH1B1P43034 410 aa30.48■■■□□ 2.47
CSPG5-205ENST00000610462 ACTR2P61160 394 aa30.48■■■□□ 2.47
CSPG5-205ENST00000610462 PPP3CAQ08209 521 aa30.48■■■□□ 2.47
CSPG5-205ENST00000610462 CETN1Q12798 172 aa30.48■■■□□ 2.47
CSPG5-205ENST00000610462 ABHD15Q6UXT9 468 aa30.48■■■□□ 2.47
CSPG5-205ENST00000610462 MAP4K3Q8IVH8 894 aa30.48■■■□□ 2.47
CSPG5-205ENST00000610462 KMT5AQ9NQR1 393 aa30.48■■■□□ 2.47
CSPG5-205ENST00000610462 FTCDO95954 541 aa30.48■■■□□ 2.47
CSPG5-205ENST00000610462 MCCD1P59942 119 aaPredicted RBP30.48■■■□□ 2.47
CSPG5-205ENST00000610462 C1orf220Q5T0J3 134 aa30.48■■■□□ 2.47
CSPG5-205ENST00000610462 PHLDB3Q6NSJ2 640 aa30.48■■■□□ 2.47
CSPG5-205ENST00000610462 DNERQ8NFT8 737 aa30.48■■■□□ 2.47
CSPG5-205ENST00000610462 SLC30A5Q8TAD4 765 aa30.48■■■□□ 2.47
CSPG5-205ENST00000610462 NTPCRQ9BSD7 190 aaKnown RBP30.48■■■□□ 2.47
CSPG5-205ENST00000610462 ST7Q9NRC1 585 aa30.48■■■□□ 2.47
CSPG5-205ENST00000610462 TELO2Q9Y4R8 837 aa30.48■■■□□ 2.47
CSPG5-205ENST00000610462 H2AFZP0C0S5 128 aa30.47■■■□□ 2.47
CSPG5-205ENST00000610462 CCDC70Q6NSX1 233 aa30.47■■■□□ 2.47
CSPG5-205ENST00000610462 H2AFVQ71UI9 128 aa30.47■■■□□ 2.47
CSPG5-205ENST00000610462 ZSWIM2Q8NEG5 633 aa30.47■■■□□ 2.47
CSPG5-205ENST00000610462 OLIG1Q8TAK6 271 aa30.47■■■□□ 2.47
CSPG5-205ENST00000610462 LNX1Q8TBB1 728 aaPredicted RBP30.47■■■□□ 2.47
CSPG5-205ENST00000610462 PDLIM7Q9NR12 457 aa30.47■■■□□ 2.47
CSPG5-205ENST00000610462 EPC2Q52LR7 807 aa30.46■■■□□ 2.47
CSPG5-205ENST00000610462 TREML2Q5T2D2 321 aa30.46■■■□□ 2.47
CSPG5-205ENST00000610462 CCDC60Q8IWA6 550 aaPredicted RBP30.46■■■□□ 2.47
CSPG5-205ENST00000610462 U2AF1L4Q8WU68 220 aaKnown RBP30.46■■■□□ 2.47
CSPG5-205ENST00000610462 BSNDQ8WZ55 320 aa30.46■■■□□ 2.47
CSPG5-205ENST00000610462 ANKRD63C9JTQ0 380 aa30.46■■■□□ 2.47
CSPG5-205ENST00000610462 STXBP2Q15833 593 aa30.46■■■□□ 2.47
CSPG5-205ENST00000610462 MIS18BP1Q6P0N0 1132 aa30.46■■■□□ 2.47
CSPG5-205ENST00000610462 MSL3Q8N5Y2 521 aaKnown RBP30.46■■■□□ 2.47
CSPG5-205ENST00000610462 MCPH1Q8NEM0 835 aa30.46■■■□□ 2.47
CSPG5-205ENST00000610462 PLEKHO2Q8TD55 490 aa30.46■■■□□ 2.47
CSPG5-205ENST00000610462 VTI1AQ96AJ9 217 aa30.46■■■□□ 2.47
CSPG5-205ENST00000610462 SYT11Q9BT88 431 aa30.46■■■□□ 2.47
CSPG5-205ENST00000610462 ADARB2Q9NS39 739 aaKnown RBP30.46■■■□□ 2.47
CSPG5-205ENST00000610462 A0A0A6YYK5 440 aaPredicted RBP30.45■■■□□ 2.47
CSPG5-205ENST00000610462 DENND3A2RUS2 1198 aa30.45■■■□□ 2.47
CSPG5-205ENST00000610462 PMM2O15305 246 aa30.45■■■□□ 2.47
CSPG5-205ENST00000610462 DGAT1O75907 488 aa30.45■■■□□ 2.47
CSPG5-205ENST00000610462 DDNO94850 711 aaPredicted RBP30.45■■■□□ 2.47
CSPG5-205ENST00000610462 SP4Q02446 784 aa30.45■■■□□ 2.47
CSPG5-205ENST00000610462 SMC1AQ14683 1233 aaKnown RBP30.45■■■□□ 2.47
CSPG5-205ENST00000610462 LBX2Q6XYB7 198 aa30.45■■■□□ 2.47
CSPG5-205ENST00000610462 KIFC3Q9BVG8 833 aa30.45■■■□□ 2.47
CSPG5-205ENST00000610462 SEPT9Q9UHD8 586 aaPredicted RBP30.45■■■□□ 2.47
CSPG5-205ENST00000610462 ADSSP30520 456 aa30.45■■■□□ 2.46
CSPG5-205ENST00000610462 ICAM3P32942 547 aa30.45■■■□□ 2.46
CSPG5-205ENST00000610462 GCLMP48507 274 aa30.45■■■□□ 2.46
CSPG5-205ENST00000610462 PRKCEQ02156 737 aa30.45■■■□□ 2.46
CSPG5-205ENST00000610462 ARHGAP44Q17R89 818 aa30.45■■■□□ 2.46
CSPG5-205ENST00000610462 CFAP221Q4G0U5 840 aa30.45■■■□□ 2.46
CSPG5-205ENST00000610462 EIF3JO75822 258 aaKnown RBP30.44■■■□□ 2.46
CSPG5-205ENST00000610462 ADRB2P07550 413 aa30.44■■■□□ 2.46
CSPG5-205ENST00000610462 SUPT20HL2P0C7V6 817 aa30.44■■■□□ 2.46
CSPG5-205ENST00000610462 CNGA1P29973 690 aa30.44■■■□□ 2.46
CSPG5-205ENST00000610462 RTP1P59025 263 aa30.44■■■□□ 2.46
CSPG5-205ENST00000610462 DLK2Q6UY11 383 aa30.44■■■□□ 2.46
CSPG5-205ENST00000610462 DNAAF5Q86Y56 855 aa30.44■■■□□ 2.46
CSPG5-205ENST00000610462 ANKRD35Q8N283 1001 aa30.44■■■□□ 2.46
CSPG5-205ENST00000610462 CYP26B1Q9NR63 512 aa30.44■■■□□ 2.46
CSPG5-205ENST00000610462 EHD2Q9NZN4 543 aa30.44■■■□□ 2.46
CSPG5-205ENST00000610462 CSADQ9Y600 493 aa30.44■■■□□ 2.46
CSPG5-205ENST00000610462 NOP2P46087 812 aaKnown RBP30.43■■■□□ 2.46
CSPG5-205ENST00000610462 KIF22Q14807 665 aa30.43■■■□□ 2.46
CSPG5-205ENST00000610462 MAP9Q49MG5 647 aa30.43■■■□□ 2.46
CSPG5-205ENST00000610462 SUGCTQ9HAC7 445 aa30.43■■■□□ 2.46
CSPG5-205ENST00000610462 SMARCAL1Q9NZC9 954 aa30.43■■■□□ 2.46
CSPG5-205ENST00000610462 PFASO15067 1338 aa30.43■■■□□ 2.46
CSPG5-205ENST00000610462 IGSF9BQ9UPX0 1349 aa30.43■■■□□ 2.46
CSPG5-205ENST00000610462 GOLGA8IPA6NC78 632 aa30.43■■■□□ 2.46
CSPG5-205ENST00000610462 GOLGA8JA6NMD2 632 aa30.43■■■□□ 2.46
CSPG5-205ENST00000610462 SOX10P56693 466 aa30.43■■■□□ 2.46
CSPG5-205ENST00000610462 SP2Q02086 613 aa30.43■■■□□ 2.46
CSPG5-205ENST00000610462 RUBCNQ92622 972 aa30.43■■■□□ 2.46
CSPG5-205ENST00000610462 DCPSQ96C86 337 aaKnown RBP30.43■■■□□ 2.46
CSPG5-205ENST00000610462 UBE2TQ9NPD8 197 aaPredicted RBP30.43■■■□□ 2.46
CSPG5-205ENST00000610462 XPNPEP1Q9NQW7 623 aa30.43■■■□□ 2.46
CSPG5-205ENST00000610462 FBXO40Q9UH90 709 aa30.43■■■□□ 2.46
CSPG5-205ENST00000610462 USP20Q9Y2K6 914 aa30.43■■■□□ 2.46
CSPG5-205ENST00000610462 SNRNP35Q16560 246 aaKnown RBP30.42■■■□□ 2.46
CSPG5-205ENST00000610462 XKR3Q5GH77 459 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms