RNA–Protein interactions for RNA: ENST00000606377.6

PAX6-231, Transcript of paired box 6, human

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,901 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-231	ENST00000606377	DACT3	Q96B18	629 aa	Predicted RBP	10.64	□□□□□ -0.71
PAX6-231	ENST00000606377	SYNGAP1	Q96PV0	1343 aa		10.64	□□□□□ -0.71
PAX6-231	ENST00000606377	PI4K2B	G5E9Z4	385 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	LCP1	P13796	627 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	TAF1B	Q53T94	588 aa	Predicted RBP	10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	STRIP1	Q5VSL9	837 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	PRR5L	Q6MZQ0	368 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	CNOT10	Q9H9A5	744 aa	Known RBP	10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	ABCB6	Q9NP58	842 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	RGL1	Q9NZL6	768 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	SEL1L	Q9UBV2	794 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	TTC7A	Q9ULT0	858 aa	Predicted RBP	10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	SCAF8	Q9UPN6	1271 aa	Known RBP	10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	ORC6	Q9Y5N6	252 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	JCAD	Q9P266	1359 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	SMIM24	O75264	130 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	CHEK2	O96017	543 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	TRIM49	P0CI25	452 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	TRIM49C	P0CI26	452 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	CPB1	P15086	417 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	SDC4	P31431	198 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	ZNF211	Q13398	564 aa	Predicted RBP	10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	C6orf118	Q5T5N4	469 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	LMBRD2	Q68DH5	695 aa	Predicted RBP	10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	CRAMP1	Q96RY5	1269 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	DONSON	Q9NYP3	566 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	CPSF2	Q9P2I0	782 aa	Known RBP	10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	PODXL	O00592	558 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	NEMP1	O14524	444 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	FTL	P02792	175 aa	Predicted RBP	10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	TAC1	P20366	129 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	CA4	P22748	312 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	ARL4C	P56559	192 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	ANGPTL8	Q6UXH0	198 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	RNF149	Q8NC42	400 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	PLAA	Q9Y263	795 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	PIK3R2	O00459	728 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	KIF19	Q2TAC6	998 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	ACCSL	Q4AC99	568 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	ANKRD20A4	Q4UJ75	823 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	ANKRD20A8P	Q5CZ79	823 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	ANKRD20A2	Q5SQ80	823 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	ANKRD20A1	Q5TYW2	823 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	ALS2CL	Q60I27	953 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	KRT39	Q6A163	491 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	EMSY	Q7Z589	1322 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	ARHGEF40	Q8TER5	1519 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	NAALADL2	Q58DX5	795 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	PRAMEF18	Q5VWM3	479 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	RMDN2	Q96LZ7	410 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	FOXN1	O15353	648 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	HSPA4L	O95757	839 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	COPB2	P35606	906 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	OCRL	Q01968	901 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	CACNB2	Q08289	660 aa	Predicted RBP	10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	ATG16L1	Q676U5	607 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	CLEC10A	Q8IUN9	316 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	THOC1	Q96FV9	657 aa	Known RBP	10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	IP6K2	Q9UHH9	426 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	ABCA6	Q8N139	1617 aa		10.63	□□□□□ -0.71
PAX6-231	ENST00000606377	NCK2	O43639	380 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	MX2	P20592	715 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	HDLBP	Q00341	1268 aa	Known RBP	10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	ADCY2	Q08462	1091 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	COG2	Q14746	738 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	VPS72	Q15906	364 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	PDCD7	Q8N8D1	485 aa	Known RBP	10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	TTC17	Q96AE7	1141 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	VPS39	Q96JC1	886 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	SUCLA2	Q9P2R7	463 aa	Predicted RBP	10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	TSR3	Q9UJK0	312 aa	Known RBP	10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	PIN4	Q9Y237	131 aa	Known RBP	10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	FDX1	P10109	184 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	PAPOLA	P51003	745 aa	Known RBP	10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	STAT5B	P51692	787 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	TFDP2	Q14188	446 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	ACAP3	Q96P50	834 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	SH2D3A	Q9BRG2	576 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	SPON1	Q9HCB6	807 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	SARS2	Q9NP81	518 aa	Known RBP	10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	MTMR4	Q9NYA4	1195 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	MID2	Q9UJV3	735 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	ATP8B1	O43520	1251 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	SNX2	O60749	519 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	NR1D1	P20393	614 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	NMT1	P30419	496 aa	Known RBP	10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	EIF3B	P55884	814 aa	Known RBP	10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	ATP2C1	P98194	919 aa	Predicted RBP	10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	EPHA7	Q15375	998 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	SMAD1	Q15797	465 aa	Known RBP	10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	CDC42EP5	Q6NZY7	148 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	TTC13	Q8NBP0	860 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	UBE2Q2	Q8WVN8	375 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	SPATA17	Q96L03	361 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	MRPL46	Q9H2W6	279 aa	Known RBP	10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	SP110	Q9HB58	689 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	KCNH4	Q9UQ05	1017 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	SPECC1L-ADORA2A	F8WAN1	911 aa		10.62	□□□□□ -0.71
PAX6-231	ENST00000606377	FAM102A	Q5T9C2	384 aa	Predicted RBP	10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms