RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 MTHFD1LQ6UB35 978 aa15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 TMEM173Q86WV6 379 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 NME8Q8N427 588 aa15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 PJA1Q8NG27 643 aa15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 HELQQ8TDG4 1101 aa15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 IPO9Q96P70 1041 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 RNF26Q9BY78 433 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 ELAC1Q9H777 363 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 STK36Q9NRP7 1315 aa15.69■□□□□ 0.1
SHKBP1-218ENST00000598907 MIA3Q5JRA6 1907 aa15.69■□□□□ 0.1
SHKBP1-218ENST00000598907 PRPF3O43395 683 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-218ENST00000598907 LAMTOR5O43504 91 aa15.69■□□□□ 0.1
SHKBP1-218ENST00000598907 JAK2O60674 1132 aa15.69■□□□□ 0.1
SHKBP1-218ENST00000598907 FDPSP14324 419 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-218ENST00000598907 BCAR1P56945 870 aa15.69■□□□□ 0.1
SHKBP1-218ENST00000598907 CSTF1Q05048 431 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-218ENST00000598907 TRAF1Q13077 416 aa15.69■□□□□ 0.1
SHKBP1-218ENST00000598907 PHLDB3Q6NSJ2 640 aa15.69■□□□□ 0.1
SHKBP1-218ENST00000598907 DCLRE1AQ6PJP8 1040 aa15.69■□□□□ 0.1
SHKBP1-218ENST00000598907 SLC44A3Q8N4M1 653 aa15.69■□□□□ 0.1
SHKBP1-218ENST00000598907 ATRIPQ8WXE1 791 aa15.69■□□□□ 0.1
SHKBP1-218ENST00000598907 GPRASP2Q96D09 838 aa15.69■□□□□ 0.1
SHKBP1-218ENST00000598907 PARD6AQ9NPB6 346 aa15.69■□□□□ 0.1
SHKBP1-218ENST00000598907 CACNA1IQ9P0X4 2223 aa15.69■□□□□ 0.1
SHKBP1-218ENST00000598907 PATJQ8NI35 1801 aa15.68■□□□□ 0.1
SHKBP1-218ENST00000598907 ZC3H11AO75152 810 aaKnown RBP eCLIP15.68■□□□□ 0.1
SHKBP1-218ENST00000598907 MYBP10242 640 aa15.68■□□□□ 0.1
SHKBP1-218ENST00000598907 ITGB5P18084 799 aa15.68■□□□□ 0.1
SHKBP1-218ENST00000598907 KLRC1P26715 233 aa15.68■□□□□ 0.1
SHKBP1-218ENST00000598907 ALDH7A1P49419 539 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-218ENST00000598907 FAM189BP81408 668 aa15.68■□□□□ 0.1
SHKBP1-218ENST00000598907 MTMR1Q13613 665 aa15.68■□□□□ 0.1
SHKBP1-218ENST00000598907 PTPN14Q15678 1187 aa15.68■□□□□ 0.1
SHKBP1-218ENST00000598907 CUL5Q93034 780 aa15.68■□□□□ 0.1
SHKBP1-218ENST00000598907 PHKBQ93100 1093 aa15.68■□□□□ 0.1
SHKBP1-218ENST00000598907 JPH1Q9HDC5 661 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-218ENST00000598907 DTNBO60941 627 aa15.67■□□□□ 0.1
SHKBP1-218ENST00000598907 SSBP05455 408 aaKnown RBP eCLIP15.67■□□□□ 0.1
SHKBP1-218ENST00000598907 HMGN5P82970 282 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-218ENST00000598907 SSRP1Q08945 709 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-218ENST00000598907 DSC3Q14574 896 aa15.67■□□□□ 0.1
SHKBP1-218ENST00000598907 CCDC82Q8N4S0 544 aa15.67■□□□□ 0.1
SHKBP1-218ENST00000598907 TNPO1Q92973 898 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-218ENST00000598907 CDHR1Q96JP9 859 aa15.67■□□□□ 0.1
SHKBP1-218ENST00000598907 MYADMQ96S97 322 aa15.67■□□□□ 0.1
SHKBP1-218ENST00000598907 PCDHGA2Q9Y5H1 932 aa15.67■□□□□ 0.1
SHKBP1-218ENST00000598907 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-218ENST00000598907 V9GY48 417 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-218ENST00000598907 PNMA6FA0A0J9YX94 578 aa15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 VTNP04004 478 aa15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 CTSAP10619 480 aa15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 KLRC2P26717 231 aa15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 LPAL2Q16609 132 aa15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 ZNF528Q3MIS6 628 aa15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 PPFIBP1Q86W92 1011 aa15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 ECHDC2Q86YB7 292 aa15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 KIAA0319LQ8IZA0 1049 aa15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 BCL7CQ8WUZ0 217 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 SLC26A6Q9BXS9 759 aa15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 BCO2Q9BYV7 579 aa15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 ORC3Q9UBD5 711 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 SLC9A2Q9UBY0 812 aa15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 GMEB2Q9UKD1 530 aa15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 SMC3Q9UQE7 1217 aa15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 ANKRD11Q6UB99 2663 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 CLUHO75153 1309 aa15.66■□□□□ 0.1
SHKBP1-218ENST00000598907 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 DEXIO95424 95 aa15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 TGM1P22735 817 aa15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 GJB2P29033 226 aa15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 STAT5BP51692 787 aa15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 SPEM2Q0P670 501 aa15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 GIT2Q14161 759 aa15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 PFKFB3Q16875 520 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 TSSK4Q6SA08 328 aa15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 C15orf39Q6ZRI6 1047 aa15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 TRIM22Q8IYM9 498 aa15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 RRP36Q96EU6 259 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 MRPL9Q9BYD2 267 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 EPC1Q9H2F5 836 aa15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 MAN1C1Q9NR34 630 aa15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 FOXD4L1Q9NU39 408 aa15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 FBXO4Q9UKT5 387 aa15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 ANGPTL2Q9UKU9 493 aa15.65■□□□□ 0.1
SHKBP1-218ENST00000598907 ZSCAN20P17040 1043 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-218ENST00000598907 DDIT3P35638 169 aa15.64■□□□□ 0.09
SHKBP1-218ENST00000598907 CLCN4P51793 760 aa15.64■□□□□ 0.09
SHKBP1-218ENST00000598907 CRYBB1P53674 252 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-218ENST00000598907 ACTR2P61160 394 aa15.64■□□□□ 0.09
SHKBP1-218ENST00000598907 UBXN2BQ14CS0 331 aa15.64■□□□□ 0.09
SHKBP1-218ENST00000598907 GET4Q7L5D6 327 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-218ENST00000598907 SPRYD3Q8NCJ5 442 aa15.64■□□□□ 0.09
SHKBP1-218ENST00000598907 STAMQ92783 540 aa15.64■□□□□ 0.09
SHKBP1-218ENST00000598907 EPS15L1Q9UBC2 864 aa15.64■□□□□ 0.09
SHKBP1-218ENST00000598907 IRAK3Q9Y616 596 aa15.64■□□□□ 0.09
SHKBP1-218ENST00000598907 hCG_1642624A0A1W2PR95 340 aa15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 SLC30A4O14863 429 aa15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 HSP90AA1P07900 732 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-218ENST00000598907 POLGP54098 1239 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms