RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 DAXXQ9UER7 740 aaPredicted RBP17.15■□□□□ 0.34
XRCC1-206ENST00000597811 COL4A3BPQ9Y5P4 624 aa17.15■□□□□ 0.34
XRCC1-206ENST00000597811 CSDE1O75534 798 aaKnown RBP17.14■□□□□ 0.33
XRCC1-206ENST00000597811 CSPG5O95196 566 aa17.14■□□□□ 0.33
XRCC1-206ENST00000597811 ZSCAN22P10073 491 aaPredicted RBP17.14■□□□□ 0.33
XRCC1-206ENST00000597811 FGFR1P11362 822 aa17.14■□□□□ 0.33
XRCC1-206ENST00000597811 MUTP22033 750 aa17.14■□□□□ 0.33
XRCC1-206ENST00000597811 FGFR4P22455 802 aa17.14■□□□□ 0.33
XRCC1-206ENST00000597811 KCNA5P22460 613 aa17.14■□□□□ 0.33
XRCC1-206ENST00000597811 MARCKSP29966 332 aaPredicted RBP17.14■□□□□ 0.33
XRCC1-206ENST00000597811 FAM189BP81408 668 aa17.14■□□□□ 0.33
XRCC1-206ENST00000597811 P2RX5Q93086 422 aa17.14■□□□□ 0.33
XRCC1-206ENST00000597811 INO80BQ9C086 356 aaPredicted RBP17.14■□□□□ 0.33
XRCC1-206ENST00000597811 LMAN2LQ9H0V9 348 aa17.14■□□□□ 0.33
XRCC1-206ENST00000597811 TMEM161AQ9NX61 479 aa17.14■□□□□ 0.33
XRCC1-206ENST00000597811 HCSTQ9UBK5 93 aa17.14■□□□□ 0.33
XRCC1-206ENST00000597811 DBR1Q9UK59 544 aaKnown RBP17.14■□□□□ 0.33
XRCC1-206ENST00000597811 PLAGL2Q9UPG8 496 aa17.14■□□□□ 0.33
XRCC1-206ENST00000597811 DNM3Q9UQ16 869 aa17.14■□□□□ 0.33
XRCC1-206ENST00000597811 TBKBP1A7MCY6 615 aa17.13■□□□□ 0.33
XRCC1-206ENST00000597811 SSBP05455 408 aaKnown RBP eCLIP17.13■□□□□ 0.33
XRCC1-206ENST00000597811 ITGB1P05556 798 aa17.13■□□□□ 0.33
XRCC1-206ENST00000597811 ZSCAN20P17040 1043 aaPredicted RBP17.13■□□□□ 0.33
XRCC1-206ENST00000597811 DNAJB1P25685 340 aa17.13■□□□□ 0.33
XRCC1-206ENST00000597811 UBA7P41226 1012 aa17.13■□□□□ 0.33
XRCC1-206ENST00000597811 LAMTOR4Q0VGL1 99 aa17.13■□□□□ 0.33
XRCC1-206ENST00000597811 CAMK1Q14012 370 aa17.13■□□□□ 0.33
XRCC1-206ENST00000597811 ECM1Q16610 540 aa17.13■□□□□ 0.33
XRCC1-206ENST00000597811 CABP7Q86V35 215 aa17.13■□□□□ 0.33
XRCC1-206ENST00000597811 ZNF410Q86VK4 478 aa17.13■□□□□ 0.33
XRCC1-206ENST00000597811 KLHL23Q8NBE8 558 aa17.13■□□□□ 0.33
XRCC1-206ENST00000597811 CALML4Q96GE6 196 aa17.13■□□□□ 0.33
XRCC1-206ENST00000597811 BHMT2Q9H2M3 363 aa17.13■□□□□ 0.33
XRCC1-206ENST00000597811 ELAC1Q9H777 363 aaKnown RBP17.13■□□□□ 0.33
XRCC1-206ENST00000597811 RNF216Q9NWF9 866 aaPredicted RBP17.13■□□□□ 0.33
XRCC1-206ENST00000597811 E9PMD0 336 aa17.12■□□□□ 0.33
XRCC1-206ENST00000597811 ASAP2O43150 1006 aa17.12■□□□□ 0.33
XRCC1-206ENST00000597811 SFPQP23246 707 aaKnown RBP eCLIP17.12■□□□□ 0.33
XRCC1-206ENST00000597811 TFDP1Q14186 410 aa17.12■□□□□ 0.33
XRCC1-206ENST00000597811 MXD4Q14582 209 aaPredicted RBP17.12■□□□□ 0.33
XRCC1-206ENST00000597811 COL19A1Q14993 1142 aa17.12■□□□□ 0.33
XRCC1-206ENST00000597811 STK38Q15208 465 aa17.12■□□□□ 0.33
XRCC1-206ENST00000597811 NAALADL2Q58DX5 795 aa17.12■□□□□ 0.33
XRCC1-206ENST00000597811 PADI6Q6TGC4 694 aa17.12■□□□□ 0.33
XRCC1-206ENST00000597811 RNF149Q8NC42 400 aa17.12■□□□□ 0.33
XRCC1-206ENST00000597811 SPPL3Q8TCT6 385 aa17.12■□□□□ 0.33
XRCC1-206ENST00000597811 AK8Q96MA6 479 aa17.12■□□□□ 0.33
XRCC1-206ENST00000597811 USP28Q96RU2 1077 aa17.12■□□□□ 0.33
XRCC1-206ENST00000597811 NT5C3AQ9H0P0 336 aa17.12■□□□□ 0.33
XRCC1-206ENST00000597811 POLR3FQ9H1D9 316 aaPredicted RBP17.12■□□□□ 0.33
XRCC1-206ENST00000597811 RNF19AQ9NV58 838 aa17.12■□□□□ 0.33
XRCC1-206ENST00000597811 TFIP11Q9UBB9 837 aaKnown RBP17.12■□□□□ 0.33
XRCC1-206ENST00000597811 F13A1P00488 732 aa17.11■□□□□ 0.33
XRCC1-206ENST00000597811 LONP1P36776 959 aaKnown RBP17.11■□□□□ 0.33
XRCC1-206ENST00000597811 PHKA2P46019 1235 aa17.11■□□□□ 0.33
XRCC1-206ENST00000597811 LEXMQ3ZCV2 418 aa17.11■□□□□ 0.33
XRCC1-206ENST00000597811 CATSPER4Q7RTX7 472 aa17.11■□□□□ 0.33
XRCC1-206ENST00000597811 ECHDC2Q86YB7 292 aa17.11■□□□□ 0.33
XRCC1-206ENST00000597811 MCPH1Q8NEM0 835 aa17.11■□□□□ 0.33
XRCC1-206ENST00000597811 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.11■□□□□ 0.33
XRCC1-206ENST00000597811 PABPC5Q96DU9 382 aaKnown RBP17.11■□□□□ 0.33
XRCC1-206ENST00000597811 XPNPEP1Q9NQW7 623 aa17.11■□□□□ 0.33
XRCC1-206ENST00000597811 TYW1Q9NV66 732 aaKnown RBP17.11■□□□□ 0.33
XRCC1-206ENST00000597811 LRRIQ4A6NIV6 560 aa17.1■□□□□ 0.33
XRCC1-206ENST00000597811 H3BQ06 376 aaPredicted RBP17.1■□□□□ 0.33
XRCC1-206ENST00000597811 HYAL1Q12794 435 aa17.1■□□□□ 0.33
XRCC1-206ENST00000597811 PKP1Q13835 747 aa17.1■□□□□ 0.33
XRCC1-206ENST00000597811 SPECC1Q5M775 1068 aa17.1■□□□□ 0.33
XRCC1-206ENST00000597811 SPOUT1Q5T280 376 aaKnown RBP17.1■□□□□ 0.33
XRCC1-206ENST00000597811 POF1BQ8WVV4 589 aa17.1■□□□□ 0.33
XRCC1-206ENST00000597811 CASD1Q96PB1 797 aa17.1■□□□□ 0.33
XRCC1-206ENST00000597811 MMTAG2Q9BU76 263 aaKnown RBP17.1■□□□□ 0.33
XRCC1-206ENST00000597811 CSRNP2Q9H175 543 aa17.1■□□□□ 0.33
XRCC1-206ENST00000597811 CWH43Q9H720 699 aa17.1■□□□□ 0.33
XRCC1-206ENST00000597811 GPRC5CQ9NQ84 441 aa17.1■□□□□ 0.33
XRCC1-206ENST00000597811 A0A0U1RQF3 1178 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 INO80B-WBP1J3KQ70 363 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 ERLIN2O94905 339 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 EYA4O95677 639 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 ATF7P17544 494 aaPredicted RBP17.09■□□□□ 0.33
XRCC1-206ENST00000597811 GTF2F1P35269 517 aaKnown RBP eCLIP17.09■□□□□ 0.33
XRCC1-206ENST00000597811 IRS1P35568 1242 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 TXLNAP40222 546 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 GRIN1Q05586 938 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 NCBP1Q09161 790 aaKnown RBP17.09■□□□□ 0.33
XRCC1-206ENST00000597811 DHX8Q14562 1220 aaKnown RBP17.09■□□□□ 0.33
XRCC1-206ENST00000597811 PTPAQ15257 358 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 CLLU1OSQ5K130 101 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 LRRC55Q6ZSA7 311 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 EP400NLQ6ZTU2 488 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 ZNF598Q86UK7 904 aaKnown RBP17.09■□□□□ 0.33
XRCC1-206ENST00000597811 COLGALT1Q8NBJ5 622 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 RNF169Q8NCN4 708 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 ASAP3Q8TDY4 903 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 TMEM117Q9H0C3 514 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 IFT122Q9HBG6 1241 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 POLD4Q9HCU8 107 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 CLDND1Q9NY35 253 aa17.09■□□□□ 0.33
XRCC1-206ENST00000597811 PIN4Q9Y237 131 aaKnown RBP17.09■□□□□ 0.33
XRCC1-206ENST00000597811 PCDHB12Q9Y5F1 795 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms