RNA–Protein interactions for RNA: ENST00000596613.5

FARP1-220, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-220ENST00000596613 ASAP3Q8TDY4 903 aa9.45□□□□□ -0.9
FARP1-220ENST00000596613 CCDC12Q8WUD4 166 aaPredicted RBP9.45□□□□□ -0.9
FARP1-220ENST00000596613 TNPO1Q92973 898 aaKnown RBP9.45□□□□□ -0.9
FARP1-220ENST00000596613 TRIM43Q96BQ3 446 aaPredicted RBP9.45□□□□□ -0.9
FARP1-220ENST00000596613 CDHR1Q96JP9 859 aa9.45□□□□□ -0.9
FARP1-220ENST00000596613 PDCD2LQ9BRP1 358 aa9.45□□□□□ -0.9
FARP1-220ENST00000596613 MYL10Q9BUA6 226 aa9.45□□□□□ -0.9
FARP1-220ENST00000596613 HIPK3Q9H422 1215 aa9.45□□□□□ -0.9
FARP1-220ENST00000596613 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.44□□□□□ -0.9
FARP1-220ENST00000596613 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.44□□□□□ -0.9
FARP1-220ENST00000596613 GOLGA8AA7E2F4 631 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 GOLGA8BA8MQT2 603 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 K7ELQ4 463 aaPredicted RBP9.44□□□□□ -0.9
FARP1-220ENST00000596613 ADCY6O43306 1168 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 EPB41L2O43491 1005 aaKnown RBP9.44□□□□□ -0.9
FARP1-220ENST00000596613 PPFIA4O75335 1185 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 FGBP02675 491 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 ACTN1P12814 892 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 ANTXR2P58335 489 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 PSMC6P62333 389 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 PURAQ00577 322 aaKnown RBP9.44□□□□□ -0.9
FARP1-220ENST00000596613 PGM5Q15124 567 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 SHHQ15465 462 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 SPRED3Q2MJR0 410 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 MEI1Q5TIA1 1274 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 MCTP2Q6DN12 878 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 PSRC1Q6PGN9 363 aaPredicted RBP9.44□□□□□ -0.9
FARP1-220ENST00000596613 CPLX2Q6PUV4 134 aaKnown RBP9.44□□□□□ -0.9
FARP1-220ENST00000596613 ADAMTSL4Q6UY14 1074 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 DTHD1Q6ZMT9 781 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 CHSY3Q70JA7 882 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 HEATR3Q7Z4Q2 680 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 VSIG10LQ86VR7 867 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 TEX2Q8IWB9 1127 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 FAM126BQ8IXS8 530 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 DEFB123Q8N688 67 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 NUDT8Q8WV74 236 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 SPATA33Q96N06 139 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 JAKMIP1Q96N16 626 aaKnown RBP9.44□□□□□ -0.9
FARP1-220ENST00000596613 LRRC2Q9BYS8 371 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 TRIM33Q9UPN9 1127 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 ASTN1O14525 1302 aa9.44□□□□□ -0.9
FARP1-220ENST00000596613 FRMPD3Q5JV73 1810 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 A0A096LPE4 126 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 KLF18A0A0U1RQI7 1052 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 A0A1W2PPZ6 126 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 hCG_1984214I3L0E3 225 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 MAFGO15525 162 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 CYTH3O43739 400 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 RGS9O75916 674 aaPredicted RBP9.43□□□□□ -0.9
FARP1-220ENST00000596613 PARNO95453 639 aaKnown RBP9.43□□□□□ -0.9
FARP1-220ENST00000596613 FOSP01100 380 aaPredicted RBP9.43□□□□□ -0.9
FARP1-220ENST00000596613 PFKMP08237 780 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 GNAT1P11488 350 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 RXRAP19793 462 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 ITPKAP23677 461 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 ZNF76P36508 570 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 METAP2P50579 478 aaKnown RBP eCLIP9.43□□□□□ -0.9
FARP1-220ENST00000596613 RCAN1P53805 252 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 NAPAP54920 295 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 GHRHRQ02643 423 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 SRBD1Q8N5C6 995 aaKnown RBP9.43□□□□□ -0.9
FARP1-220ENST00000596613 ZNF713Q8N859 430 aaPredicted RBP9.43□□□□□ -0.9
FARP1-220ENST00000596613 SLC43A3Q8NBI5 491 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 PPTC7Q8NI37 304 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 AFG1LQ8WV93 481 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 TTC9Q92623 222 aa9.43□□□□□ -0.9
FARP1-220ENST00000596613 FTOQ9C0B1 505 aaKnown RBP eCLIP9.43□□□□□ -0.9
FARP1-220ENST00000596613 ALDH8A1Q9H2A2 487 aaPredicted RBP9.43□□□□□ -0.9
FARP1-220ENST00000596613 DDX41Q9UJV9 622 aaKnown RBP9.43□□□□□ -0.9
FARP1-220ENST00000596613 DDX49Q9Y6V7 483 aaKnown RBP9.43□□□□□ -0.9
FARP1-220ENST00000596613 CTAGE5O15320 804 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 FIBPO43427 364 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 PLEKHA8P1O95397 391 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 GGPS1O95749 300 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 CD4P01730 458 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 ALBP02768 609 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 HSPA4P34932 840 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 RFC2P35250 354 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 SMAD3P84022 425 aaKnown RBP9.42□□□□□ -0.9
FARP1-220ENST00000596613 FANCCQ00597 558 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 EXOSC10Q01780 885 aaKnown RBP9.42□□□□□ -0.9
FARP1-220ENST00000596613 PTGISQ16647 500 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 CELF3Q5SZQ8 465 aaKnown RBP9.42□□□□□ -0.9
FARP1-220ENST00000596613 FAM109BQ6ICB4 259 aaPredicted RBP9.42□□□□□ -0.9
FARP1-220ENST00000596613 CCDC62Q6P9F0 684 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 APOA5Q6Q788 366 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 C20orf204Q6ZNR8 217 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 Q6ZUG5 572 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 TMTC3Q6ZXV5 915 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 COPS5Q92905 334 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 ALG1Q9BT22 464 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 USP26Q9BXU7 913 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 TRPV6Q9H1D0 765 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 C6orf50Q9HD87 102 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 IL23AQ9NPF7 189 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 RTEL1Q9NZ71 1219 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 COL20A1Q9P218 1284 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 TCEAL9Q9UHQ7 104 aa9.42□□□□□ -0.9
FARP1-220ENST00000596613 MSRAQ9UJ68 235 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms