RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 A0A0U1RQF3 1178 aa17.84■□□□□ 0.45
USHBP1-206ENST00000596436 NEMFO60524 1076 aa17.84■□□□□ 0.45
USHBP1-206ENST00000596436 TECP42680 631 aa17.84■□□□□ 0.45
USHBP1-206ENST00000596436 TOB1P50616 345 aaPredicted RBP17.84■□□□□ 0.45
USHBP1-206ENST00000596436 GPC3P51654 580 aa17.84■□□□□ 0.45
USHBP1-206ENST00000596436 JAK3P52333 1124 aa17.84■□□□□ 0.45
USHBP1-206ENST00000596436 SPIRE1Q08AE8 756 aa17.84■□□□□ 0.45
USHBP1-206ENST00000596436 LARP1BQ659C4 914 aaKnown RBP17.84■□□□□ 0.45
USHBP1-206ENST00000596436 MCTP1Q6DN14 999 aa17.84■□□□□ 0.45
USHBP1-206ENST00000596436 MIER3Q7Z3K6 550 aa17.84■□□□□ 0.45
USHBP1-206ENST00000596436 SUGP1Q8IWZ8 645 aaKnown RBP17.84■□□□□ 0.45
USHBP1-206ENST00000596436 SLC39A11Q8N1S5 342 aa17.84■□□□□ 0.45
USHBP1-206ENST00000596436 INTS4Q96HW7 963 aaKnown RBP17.84■□□□□ 0.45
USHBP1-206ENST00000596436 MAP7D2Q96T17 732 aa17.84■□□□□ 0.45
USHBP1-206ENST00000596436 H3BQV1 296 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 EOMESO95936 686 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 OATP04181 439 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 DARSP14868 501 aaKnown RBP17.83■□□□□ 0.44
USHBP1-206ENST00000596436 ZSCAN20P17040 1043 aaPredicted RBP17.83■□□□□ 0.44
USHBP1-206ENST00000596436 TMOD1P28289 359 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 SFNP31947 248 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 MCM7P33993 719 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 PPP2R5CQ13362 524 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 TARBP2Q15633 366 aaKnown RBP17.83■□□□□ 0.44
USHBP1-206ENST00000596436 ZNF174Q15697 407 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 CALCRLQ16602 461 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 TTC38Q5R3I4 469 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 HSCBQ8IWL3 235 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 LRRC71Q8N4P6 559 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 MRPL43Q8N983 215 aaKnown RBP17.83■□□□□ 0.44
USHBP1-206ENST00000596436 MTMR9Q96QG7 549 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 TRAIPQ9BWF2 469 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 ENTPD7Q9NQZ7 604 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 SPG21Q9NZD8 308 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 AKT3Q9Y243 479 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 CACNA1HO95180 2353 aa17.83■□□□□ 0.44
USHBP1-206ENST00000596436 PBX3P40426 434 aa17.82■□□□□ 0.44
USHBP1-206ENST00000596436 VCPP55072 806 aaKnown RBP17.82■□□□□ 0.44
USHBP1-206ENST00000596436 PRKCEQ02156 737 aa17.82■□□□□ 0.44
USHBP1-206ENST00000596436 KRT17Q04695 432 aa17.82■□□□□ 0.44
USHBP1-206ENST00000596436 SLFN12Q8IYM2 578 aa17.82■□□□□ 0.44
USHBP1-206ENST00000596436 RDM1Q8NG50 284 aa17.82■□□□□ 0.44
USHBP1-206ENST00000596436 RSPH1Q8WYR4 309 aa17.82■□□□□ 0.44
USHBP1-206ENST00000596436 CEP89Q96ST8 783 aa17.82■□□□□ 0.44
USHBP1-206ENST00000596436 NRBP2Q9NSY0 501 aa17.82■□□□□ 0.44
USHBP1-206ENST00000596436 HCFC2Q9Y5Z7 792 aa17.82■□□□□ 0.44
USHBP1-206ENST00000596436 DMDP11532 3685 aa17.82■□□□□ 0.44
USHBP1-206ENST00000596436 C2orf71A6NGG8 1288 aa17.81■□□□□ 0.44
USHBP1-206ENST00000596436 MARCH6O60337 910 aa17.81■□□□□ 0.44
USHBP1-206ENST00000596436 TRAPPC10P48553 1259 aa17.81■□□□□ 0.44
USHBP1-206ENST00000596436 TRMT1LQ7Z2T5 733 aaKnown RBP17.81■□□□□ 0.44
USHBP1-206ENST00000596436 TMC7Q7Z402 723 aa17.81■□□□□ 0.44
USHBP1-206ENST00000596436 ABI1Q8IZP0 508 aa17.81■□□□□ 0.44
USHBP1-206ENST00000596436 CASP10Q92851 521 aa17.81■□□□□ 0.44
USHBP1-206ENST00000596436 NOL7Q9UMY1 257 aaKnown RBP17.81■□□□□ 0.44
USHBP1-206ENST00000596436 PCDHB6Q9Y5E3 794 aa17.81■□□□□ 0.44
USHBP1-206ENST00000596436 IGKV6-21A0A0C4DH24 114 aa17.8■□□□□ 0.44
USHBP1-206ENST00000596436 STBD1O95210 358 aa17.8■□□□□ 0.44
USHBP1-206ENST00000596436 BAG4O95429 457 aaKnown RBP17.8■□□□□ 0.44
USHBP1-206ENST00000596436 AVPR2P30518 371 aa17.8■□□□□ 0.44
USHBP1-206ENST00000596436 TXKP42681 527 aa17.8■□□□□ 0.44
USHBP1-206ENST00000596436 ITIH3Q06033 890 aa17.8■□□□□ 0.44
USHBP1-206ENST00000596436 ORC2Q13416 577 aaPredicted RBP17.8■□□□□ 0.44
USHBP1-206ENST00000596436 SMC1AQ14683 1233 aaKnown RBP17.8■□□□□ 0.44
USHBP1-206ENST00000596436 NCAPH2Q6IBW4 605 aa17.8■□□□□ 0.44
USHBP1-206ENST00000596436 LLGL2Q6P1M3 1020 aa17.8■□□□□ 0.44
USHBP1-206ENST00000596436 C4orf32Q8N8J7 132 aa17.8■□□□□ 0.44
USHBP1-206ENST00000596436 NECTIN4Q96NY8 510 aa17.8■□□□□ 0.44
USHBP1-206ENST00000596436 MRPL9Q9BYD2 267 aaKnown RBP17.8■□□□□ 0.44
USHBP1-206ENST00000596436 NIFKQ9BYG3 293 aaKnown RBP17.8■□□□□ 0.44
USHBP1-206ENST00000596436 ADAM7Q9H2U9 754 aa17.8■□□□□ 0.44
USHBP1-206ENST00000596436 TTC12Q9H892 705 aaPredicted RBP17.8■□□□□ 0.44
USHBP1-206ENST00000596436 DACT1Q9NYF0 836 aa17.8■□□□□ 0.44
USHBP1-206ENST00000596436 IRAK3Q9Y616 596 aa17.8■□□□□ 0.44
USHBP1-206ENST00000596436 DENND4AQ7Z401 1863 aa17.8■□□□□ 0.44
USHBP1-206ENST00000596436 ARID2Q68CP9 1835 aa17.79■□□□□ 0.44
USHBP1-206ENST00000596436 ZFHX2Q9C0A1 2572 aaPredicted RBP17.79■□□□□ 0.44
USHBP1-206ENST00000596436 VPS37CA5D8V6 355 aaPredicted RBP17.79■□□□□ 0.44
USHBP1-206ENST00000596436 CLASP2O75122 1294 aaKnown RBP17.79■□□□□ 0.44
USHBP1-206ENST00000596436 OR52Z1P0C646 297 aa17.79■□□□□ 0.44
USHBP1-206ENST00000596436 SYT1P21579 422 aa17.79■□□□□ 0.44
USHBP1-206ENST00000596436 NUBP1P53384 320 aa17.79■□□□□ 0.44
USHBP1-206ENST00000596436 DRP2Q13474 957 aa17.79■□□□□ 0.44
USHBP1-206ENST00000596436 TPRNQ4KMQ1 711 aa17.79■□□□□ 0.44
USHBP1-206ENST00000596436 HELQQ8TDG4 1101 aa17.79■□□□□ 0.44
USHBP1-206ENST00000596436 POMKQ9H5K3 350 aa17.79■□□□□ 0.44
USHBP1-206ENST00000596436 CHST12Q9NRB3 414 aa17.79■□□□□ 0.44
USHBP1-206ENST00000596436 WRAP73Q9P2S5 460 aaPredicted RBP17.79■□□□□ 0.44
USHBP1-206ENST00000596436 CDH22Q9UJ99 828 aa17.79■□□□□ 0.44
USHBP1-206ENST00000596436 PCDHA12Q9UN75 941 aa17.79■□□□□ 0.44
USHBP1-206ENST00000596436 NR2E1Q9Y466 385 aa17.79■□□□□ 0.44
USHBP1-206ENST00000596436 VPS13AQ96RL7 3174 aa17.78■□□□□ 0.44
USHBP1-206ENST00000596436 TMEM150BA6NC51 233 aa17.78■□□□□ 0.44
USHBP1-206ENST00000596436 POTEMA6NI47 508 aa17.78■□□□□ 0.44
USHBP1-206ENST00000596436 FGFR4P22455 802 aa17.78■□□□□ 0.44
USHBP1-206ENST00000596436 PHKA2P46019 1235 aa17.78■□□□□ 0.44
USHBP1-206ENST00000596436 BCAR1P56945 870 aa17.78■□□□□ 0.44
USHBP1-206ENST00000596436 CDC42EP1Q00587 391 aa17.78■□□□□ 0.44
USHBP1-206ENST00000596436 TBC1D8BQ0IIM8 1120 aa17.78■□□□□ 0.44
USHBP1-206ENST00000596436 EPHA7Q15375 998 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms