RNA–Protein interactions for RNA: ENST00000596282.5

ZNF548-205, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-205ENST00000596282 VPS52Q8N1B4 723 aa12.46□□□□□ -0.41
ZNF548-205ENST00000596282 MRPL43Q8N983 215 aaKnown RBP12.46□□□□□ -0.41
ZNF548-205ENST00000596282 PSPC1Q8WXF1 523 aaKnown RBP12.46□□□□□ -0.41
ZNF548-205ENST00000596282 NECTIN4Q96NY8 510 aa12.46□□□□□ -0.41
ZNF548-205ENST00000596282 BMP2KQ9NSY1 1161 aaPredicted RBP12.46□□□□□ -0.41
ZNF548-205ENST00000596282 FAM105AQ9NUU6 356 aa12.46□□□□□ -0.41
ZNF548-205ENST00000596282 COL4A3BPQ9Y5P4 624 aa12.46□□□□□ -0.41
ZNF548-205ENST00000596282 IGKV6-21A0A0C4DH24 114 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 C2orf71A6NGG8 1288 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 M0R2N6 131 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 SLC37A4O43826 429 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 EDIL3O43854 480 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 ERLIN2O94905 339 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 P4HBP07237 508 aaKnown RBP12.45□□□□□ -0.42
ZNF548-205ENST00000596282 NHLH1Q02575 133 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 ITIH3Q06033 890 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 SIGLEC14Q08ET2 396 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 PPP2R5CQ13362 524 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 ANKRD1Q15327 319 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 XKR9Q5GH70 373 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 ANO5Q75V66 913 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 KSR1Q8IVT5 923 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 TCP11Q8WWU5 503 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 SUSD6Q92537 303 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 RIPOR3Q96MK2 946 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 MBOAT7Q96N66 472 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 PRRX2Q99811 253 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 PHF20Q9BVI0 1012 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 PPME1Q9Y570 386 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 HCFC2Q9Y5Z7 792 aa12.45□□□□□ -0.42
ZNF548-205ENST00000596282 STK36Q9NRP7 1315 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 EML1O00423 815 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 TBX3O15119 743 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 CLASP2O75122 1294 aaKnown RBP12.44□□□□□ -0.42
ZNF548-205ENST00000596282 MTHFRP42898 656 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 NPEPPSP55786 919 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 SCRN1Q12765 414 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 TRIM29Q14134 588 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 PTPN21Q16825 1174 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 RARS2Q5T160 578 aaKnown RBP12.44□□□□□ -0.42
ZNF548-205ENST00000596282 PPP4R3AQ6IN85 833 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 SYCE2Q6PIF2 218 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 BMP8AQ7Z5Y6 402 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 SRGAP1Q7Z6B7 1085 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 SLFN12Q8IYM2 578 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 FBXL6Q8N531 539 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 TMEM143Q96AN5 459 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 LXNQ9BS40 222 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 TRAIPQ9BWF2 469 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 S1PR5Q9H228 398 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 AGPAT5Q9NUQ2 364 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 TBC1D13Q9NVG8 400 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 DZANK1Q9NVP4 752 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 ORC3Q9UBD5 711 aaPredicted RBP12.44□□□□□ -0.42
ZNF548-205ENST00000596282 STK39Q9UEW8 545 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 DBR1Q9UK59 544 aaKnown RBP12.44□□□□□ -0.42
ZNF548-205ENST00000596282 PCDHB2Q9Y5E7 798 aa12.44□□□□□ -0.42
ZNF548-205ENST00000596282 ASAP2O43150 1006 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 GAS2O43903 313 aaKnown RBP12.43□□□□□ -0.42
ZNF548-205ENST00000596282 STBD1O95210 358 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 SSBP05455 408 aaKnown RBP eCLIP12.43□□□□□ -0.42
ZNF548-205ENST00000596282 YWHABP31946 246 aaKnown RBP12.43□□□□□ -0.42
ZNF548-205ENST00000596282 KRT2P35908 639 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 MRE11P49959 708 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 PTPN5P54829 565 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 CYP4A11Q02928 519 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 MTMR3Q13615 1198 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 TFDP1Q14186 410 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 EMC2Q15006 297 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 EPHA7Q15375 998 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 ATAT1Q5SQI0 421 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 B3GNT9Q6UX72 402 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 DDX53Q86TM3 631 aaKnown RBP12.43□□□□□ -0.42
ZNF548-205ENST00000596282 CABP7Q86V35 215 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 PPFIBP1Q86W92 1011 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 TPH2Q8IWU9 490 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 TDRD5Q8NAT2 981 aaKnown RBP12.43□□□□□ -0.42
ZNF548-205ENST00000596282 RNF149Q8NC42 400 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 PRPF31Q8WWY3 499 aaKnown RBP12.43□□□□□ -0.42
ZNF548-205ENST00000596282 AUTS2Q8WXX7 1259 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 IGSF21Q96ID5 467 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 MTRQ99707 1265 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 EMILIN2Q9BXX0 1053 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 ADAM7Q9H2U9 754 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 ZSWIM4Q9H7M6 989 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 NRDE2Q9H7Z3 1164 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 RSAD1Q9HA92 442 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 KANSL3Q9P2N6 904 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 VAV3Q9UKW4 847 aa12.43□□□□□ -0.42
ZNF548-205ENST00000596282 CNTNAP2Q9UHC6 1331 aa12.42□□□□□ -0.42
ZNF548-205ENST00000596282 TECTAO75443 2155 aa12.42□□□□□ -0.42
ZNF548-205ENST00000596282 PFKFB2O60825 505 aa12.42□□□□□ -0.42
ZNF548-205ENST00000596282 ZNF623O75123 536 aa12.42□□□□□ -0.42
ZNF548-205ENST00000596282 NR1I2O75469 434 aa12.42□□□□□ -0.42
ZNF548-205ENST00000596282 OFD1O75665 1012 aa12.42□□□□□ -0.42
ZNF548-205ENST00000596282 GALTP07902 379 aa12.42□□□□□ -0.42
ZNF548-205ENST00000596282 CTSAP10619 480 aa12.42□□□□□ -0.42
ZNF548-205ENST00000596282 ITGA4P13612 1032 aa12.42□□□□□ -0.42
ZNF548-205ENST00000596282 KLRC2P26717 231 aa12.42□□□□□ -0.42
ZNF548-205ENST00000596282 LAMTOR4Q0VGL1 99 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms