RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 PSMC2P35998 433 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-205ENST00000594973 NPEPPSP55786 919 aa18.53■□□□□ 0.56
SHKBP1-205ENST00000594973 PPP2R5AQ15172 486 aa18.53■□□□□ 0.56
SHKBP1-205ENST00000594973 ZNF662Q6ZS27 426 aa18.53■□□□□ 0.56
SHKBP1-205ENST00000594973 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.53■□□□□ 0.56
SHKBP1-205ENST00000594973 EHBP1Q8NDI1 1231 aa18.53■□□□□ 0.56
SHKBP1-205ENST00000594973 NSUN6Q8TEA1 469 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-205ENST00000594973 FHDC1Q9C0D6 1143 aaPredicted RBP18.53■□□□□ 0.56
SHKBP1-205ENST00000594973 NUCKS1Q9H1E3 243 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-205ENST00000594973 GPRC5CQ9NQ84 441 aa18.53■□□□□ 0.56
SHKBP1-205ENST00000594973 CYP39A1Q9NYL5 469 aa18.53■□□□□ 0.56
SHKBP1-205ENST00000594973 LARSQ9P2J5 1176 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-205ENST00000594973 DBR1Q9UK59 544 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-205ENST00000594973 PON1P27169 355 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 JAK3P52333 1124 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 KRT76Q01546 638 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 RDH13Q8NBN7 331 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 ACAD9Q9H845 621 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 HOXC10Q9NYD6 342 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 SNCAIPQ9Y6H5 919 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 COL11A1P12107 1806 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 PARP14Q460N5 1801 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 PHIPQ8WWQ0 1821 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 SRRM3A6NNA2 597 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 PPP1R12BO60237 982 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 SERPING1P05155 500 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 MYBL2P10244 700 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 PSMC5P62195 406 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 IRX1P78414 480 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 ASTE1Q2TB18 679 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 NOL9Q5SY16 702 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 TREML2Q5T2D2 321 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 EMC10Q5UCC4 262 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 ANKRD13CQ8N6S4 541 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 TSGA10Q9BZW7 698 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 MLXIPQ9HAP2 919 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 RNF181Q9P0P0 153 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 GCNT4Q9P109 453 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 FRMD4BQ9Y2L6 1034 aa18.52■□□□□ 0.56
SHKBP1-205ENST00000594973 POLR2AP24928 1970 aaKnown RBP18.52■□□□□ 0.55
SHKBP1-205ENST00000594973 TISP43B9A030 160 aa18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 SRGAP2O75044 1071 aa18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 RGS20O76081 388 aa18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 LCA5LO95447 670 aa18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 UCHL3P15374 230 aa18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 MAGEA1P43355 309 aa18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 NAP1L1P55209 391 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 XKR9Q5GH70 373 aa18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 SYN2Q92777 582 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 BORCS6Q96GS4 357 aa18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 SPAG5Q96R06 1193 aa18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 TELO2Q9Y4R8 837 aa18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 RLFQ13129 1914 aa18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 UBE4BO95155 1302 aa18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 LYPLA2O95372 231 aa18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 SFNP31947 248 aa18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 CEP85LQ5SZL2 805 aa18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 KLHDC7AQ5VTJ3 777 aa18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 C4orf19Q8IY42 314 aa18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 INPP4AQ96PE3 977 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-205ENST00000594973 SSU72P8A0A1W2PR75 194 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 EXOC3O60645 756 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 PPP1R37O75864 691 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 PLS3P13797 630 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 KLHL30Q0D2K2 578 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 ASIC2Q16515 512 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 FAM102BQ5T8I3 360 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 DPY19L2P1Q6NXN4 242 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 XRRA1Q6P2D8 792 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 SULF1Q8IWU6 871 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 DCPSQ96C86 337 aaKnown RBP18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 GPRASP2Q96D09 838 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 GDAP1L1Q96MZ0 367 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 STRA6Q9BX79 667 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 MOV10L1Q9BXT6 1211 aaKnown RBP18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 EPN3Q9H201 632 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 PCIF1Q9H4Z3 704 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 SPON1Q9HCB6 807 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 MOCS3O95396 460 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 TRIM49P0CI25 452 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 TRIM49CP0CI26 452 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 CDR1P51861 262 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 ITIH3Q06033 890 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 NBPF20Q3BBV1 942 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 GJB7Q6PEY0 223 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 PLCB1Q9NQ66 1216 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 ADARB2Q9NS39 739 aaKnown RBP18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 PCDHA10Q9Y5I2 948 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 CAPN6Q9Y6Q1 641 aa18.5■□□□□ 0.55
SHKBP1-205ENST00000594973 A0A1B0GUA9 196 aa18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 ANO9A1A5B4 782 aa18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 TULP1O00294 542 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 ATP2A1O14983 1001 aa18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 CLSTN1O94985 981 aa18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 PEX3P56589 373 aa18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 ANO5Q75V66 913 aa18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 MMGT1Q8N4V1 131 aa18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 ACTR5Q9H9F9 607 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-205ENST00000594973 GABBR1Q9UBS5 961 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms