RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 STRCQ7RTU9 1775 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 C5orf60A6NFR6 353 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 SNX3O60493 162 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 FGRP09769 529 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 GHRP10912 638 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 MAPK7Q13164 816 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 MTM1Q13496 603 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 CTTNQ14247 550 aaKnown RBP15.34■□□□□ 0.05
CIRBP-242ENST00000593093 SETDB1Q15047 1291 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 KIAA0825Q8IV33 1275 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.34■□□□□ 0.054e-6■■■■□ 24.2
CIRBP-242ENST00000593093 P3H4Q92791 437 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 ANKRD63C9JTQ0 380 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 POC1B-GALNT4F8VUJ3 575 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 FTLP02792 175 aaPredicted RBP15.34■□□□□ 0.05
CIRBP-242ENST00000593093 FERP16591 822 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 UBXN2AP68543 259 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 C10orf76Q5T2E6 689 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 RBM26Q5T8P6 1007 aaKnown RBP15.34■□□□□ 0.05
CIRBP-242ENST00000593093 LNX1Q8TBB1 728 aaPredicted RBP15.34■□□□□ 0.05
CIRBP-242ENST00000593093 RFFLQ8WZ73 363 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 C9orf72Q96LT7 481 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 HEMGNQ9BXL5 484 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 PITPNM3Q9BZ71 974 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 CFAP73A6NFT4 308 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 EXOC3O60645 756 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 FXR2P51116 673 aaKnown RBP eCLIP15.34■□□□□ 0.05
CIRBP-242ENST00000593093 POLE2P56282 527 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 COG2Q14746 738 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 TMED2Q15363 201 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 SBK1Q52WX2 424 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 ATP8B4Q8TF62 1192 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 ATXN2LQ8WWM7 1075 aaKnown RBP15.34■□□□□ 0.05
CIRBP-242ENST00000593093 ATG4AQ8WYN0 398 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 HAS1Q92839 578 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 SPZ1Q9BXG8 430 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 HAO1Q9UJM8 370 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 MTUS1Q9ULD2 1270 aa15.34■□□□□ 0.05
CIRBP-242ENST00000593093 XIRP1Q702N8 1843 aaKnown RBP15.34■□□□□ 0.05
CIRBP-242ENST00000593093 FAM196BA6NMK8 535 aa15.33■□□□□ 0.05
CIRBP-242ENST00000593093 PPFIA2O75334 1257 aa15.33■□□□□ 0.05
CIRBP-242ENST00000593093 ZCWPW2Q504Y3 356 aa15.33■□□□□ 0.05
CIRBP-242ENST00000593093 FBXO33Q7Z6M2 555 aa15.33■□□□□ 0.05
CIRBP-242ENST00000593093 C3orf20Q8ND61 904 aa15.33■□□□□ 0.05
CIRBP-242ENST00000593093 SLC20A1Q8WUM9 679 aa15.33■□□□□ 0.05
CIRBP-242ENST00000593093 DHX36Q9H2U1 1008 aaKnown RBP15.33■□□□□ 0.05
CIRBP-242ENST00000593093 UBE2TQ9NPD8 197 aaPredicted RBP15.33■□□□□ 0.05
CIRBP-242ENST00000593093 RARAP10276 462 aa15.33■□□□□ 0.04
CIRBP-242ENST00000593093 ADCY8P40145 1251 aa15.33■□□□□ 0.04
CIRBP-242ENST00000593093 PTENP60484 403 aa15.33■□□□□ 0.04
CIRBP-242ENST00000593093 CNGA2Q16280 664 aa15.33■□□□□ 0.04
CIRBP-242ENST00000593093 DCAF12L1Q5VU92 463 aa15.33■□□□□ 0.04
CIRBP-242ENST00000593093 EXOC3L1Q86VI1 746 aa15.33■□□□□ 0.04
CIRBP-242ENST00000593093 TLCD1Q96CP7 247 aa15.33■□□□□ 0.04
CIRBP-242ENST00000593093 ERP27Q96DN0 273 aa15.33■□□□□ 0.04
CIRBP-242ENST00000593093 RMDN2Q96LZ7 410 aa15.33■□□□□ 0.04
CIRBP-242ENST00000593093 COL1A1P02452 1464 aaPredicted RBP15.33■□□□□ 0.04
CIRBP-242ENST00000593093 KIAA0391O15091 583 aaKnown RBP15.33■□□□□ 0.04
CIRBP-242ENST00000593093 AGTP01019 485 aa15.33■□□□□ 0.04
CIRBP-242ENST00000593093 MMP13P45452 471 aa15.33■□□□□ 0.04
CIRBP-242ENST00000593093 TLDC1Q6P9B6 456 aa15.33■□□□□ 0.04
CIRBP-242ENST00000593093 FITM2Q8N6M3 262 aa15.33■□□□□ 0.04
CIRBP-242ENST00000593093 ASAP2O43150 1006 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 DNAJC3Q13217 504 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 AUHQ13825 339 aaKnown RBP15.32■□□□□ 0.04
CIRBP-242ENST00000593093 PDIA5Q14554 519 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 SEPT7Q16181 437 aaKnown RBP15.32■□□□□ 0.04
CIRBP-242ENST00000593093 EMC10Q5UCC4 262 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 TRIM74Q86UV6 250 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 TRIM73Q86UV7 250 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 ADGRF4Q8IZF3 695 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 LINC00116Q8NCU8 138 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 SH2D3AQ9BRG2 576 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 PCDHA1Q9Y5I3 950 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 ZBTB39O15060 712 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 CLDN3O15551 220 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 LDHCP07864 332 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 LMNB1P20700 586 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 TRAF1Q13077 416 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 MUM1Q2TAK8 710 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 C2CD6Q53TS8 623 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 DUPD1Q68J44 220 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 GSTA5Q7RTV2 222 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 SETDB2Q96T68 719 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 MYH7P12883 1935 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 ECM29Q5VYK3 1845 aa15.32■□□□□ 0.04
CIRBP-242ENST00000593093 KRT15P19012 456 aa15.31■□□□□ 0.04
CIRBP-242ENST00000593093 COMTP21964 271 aa15.31■□□□□ 0.04
CIRBP-242ENST00000593093 HOXA13P31271 388 aaPredicted RBP15.31■□□□□ 0.04
CIRBP-242ENST00000593093 CTCFP49711 727 aaPredicted RBP15.31■□□□□ 0.04
CIRBP-242ENST00000593093 ITIH4Q14624 930 aa15.31■□□□□ 0.04
CIRBP-242ENST00000593093 HS2ST1Q7LGA3 356 aa15.31■□□□□ 0.04
CIRBP-242ENST00000593093 PRUNE1Q86TP1 453 aa15.31■□□□□ 0.04
CIRBP-242ENST00000593093 NUDCD1Q96RS6 583 aa15.31■□□□□ 0.04
CIRBP-242ENST00000593093 RUSC1Q9BVN2 902 aa15.31■□□□□ 0.04
CIRBP-242ENST00000593093 TMEM165Q9HC07 324 aa15.31■□□□□ 0.04
CIRBP-242ENST00000593093 ABCB11O95342 1321 aa15.31■□□□□ 0.04
CIRBP-242ENST00000593093 ECEL1O95672 775 aa15.31■□□□□ 0.04
CIRBP-242ENST00000593093 CCND1P24385 295 aa15.31■□□□□ 0.04
CIRBP-242ENST00000593093 GBP1P32455 592 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms