RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 PACSIN2Q9UNF0 486 aaPredicted RBP21.43■■□□□ 1.02
MBD3-209ENST00000592012 NFASCO94856 1347 aa21.42■■□□□ 1.02
MBD3-209ENST00000592012 DOCK5Q9H7D0 1870 aa21.42■■□□□ 1.02
MBD3-209ENST00000592012 CCDC169A6NNP5 214 aa21.42■■□□□ 1.02
MBD3-209ENST00000592012 P4HA2O15460 535 aa21.42■■□□□ 1.02
MBD3-209ENST00000592012 H2AFZP0C0S5 128 aa21.42■■□□□ 1.02
MBD3-209ENST00000592012 OAS2P29728 719 aaKnown RBP21.42■■□□□ 1.02
MBD3-209ENST00000592012 ADSSP30520 456 aa21.42■■□□□ 1.02
MBD3-209ENST00000592012 MCCD1P59942 119 aaPredicted RBP21.42■■□□□ 1.02
MBD3-209ENST00000592012 SH3D19Q5HYK7 790 aa21.42■■□□□ 1.02
MBD3-209ENST00000592012 SWSAP1Q6NVH7 229 aa21.42■■□□□ 1.02
MBD3-209ENST00000592012 CCNI2Q6ZMN8 369 aaPredicted RBP21.42■■□□□ 1.02
MBD3-209ENST00000592012 H2AFVQ71UI9 128 aa21.42■■□□□ 1.02
MBD3-209ENST00000592012 ATP6V0A1Q93050 837 aa21.42■■□□□ 1.02
MBD3-209ENST00000592012 CEP170P1Q96L14 293 aa21.42■■□□□ 1.02
MBD3-209ENST00000592012 MAF1Q9H063 256 aa21.42■■□□□ 1.02
MBD3-209ENST00000592012 JPH1Q9HDC5 661 aaPredicted RBP21.42■■□□□ 1.02
MBD3-209ENST00000592012 MYPNQ86TC9 1320 aa21.42■■□□□ 1.02
MBD3-209ENST00000592012 STAM2O75886 525 aa21.41■■□□□ 1.02
MBD3-209ENST00000592012 RFX1P22670 979 aa21.41■■□□□ 1.02
MBD3-209ENST00000592012 DMP1Q13316 513 aaPredicted RBP21.41■■□□□ 1.02
MBD3-209ENST00000592012 CCDC70Q6NSX1 233 aa21.41■■□□□ 1.02
MBD3-209ENST00000592012 FMNL3Q8IVF7 1028 aa21.41■■□□□ 1.02
MBD3-209ENST00000592012 LRRC57Q8N9N7 239 aa21.41■■□□□ 1.02
MBD3-209ENST00000592012 U2AF1L4Q8WU68 220 aaKnown RBP21.41■■□□□ 1.02
MBD3-209ENST00000592012 HDAC7Q8WUI4 952 aa21.41■■□□□ 1.02
MBD3-209ENST00000592012 KIFC3Q9BVG8 833 aa21.41■■□□□ 1.02
MBD3-209ENST00000592012 ZCCHC17Q9NP64 241 aaKnown RBP21.41■■□□□ 1.02
MBD3-209ENST00000592012 SPATA31C2B4DYI2 1134 aa21.41■■□□□ 1.02
MBD3-209ENST00000592012 PSAPP07602 524 aa21.41■■□□□ 1.02
MBD3-209ENST00000592012 MATR3P43243 847 aaKnown RBP eCLIP21.41■■□□□ 1.02
MBD3-209ENST00000592012 NOP2P46087 812 aaKnown RBP21.41■■□□□ 1.02
MBD3-209ENST00000592012 GCLMP48507 274 aa21.41■■□□□ 1.02
MBD3-209ENST00000592012 IFI16Q16666 785 aaKnown RBP21.41■■□□□ 1.02
MBD3-209ENST00000592012 GLYCTKQ8IVS8 523 aa21.41■■□□□ 1.02
MBD3-209ENST00000592012 PDLIM7Q9NR12 457 aa21.41■■□□□ 1.02
MBD3-209ENST00000592012 SLC9A2Q9UBY0 812 aa21.41■■□□□ 1.02
MBD3-209ENST00000592012 A0A0A6YYK5 440 aaPredicted RBP21.4■■□□□ 1.02
MBD3-209ENST00000592012 ANKRD63C9JTQ0 380 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 FOXN3O00409 490 aaPredicted RBP21.4■■□□□ 1.02
MBD3-209ENST00000592012 N4BP1O75113 896 aaKnown RBP21.4■■□□□ 1.02
MBD3-209ENST00000592012 LRRN2O75325 713 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 CCDC172P0C7W6 258 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 LMNB1P20700 586 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 CETN1Q12798 172 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 ARHGAP44Q17R89 818 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 MAP9Q49MG5 647 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 EPC2Q52LR7 807 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.4■■□□□ 1.02
MBD3-209ENST00000592012 MAP4K3Q8IVH8 894 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 BSNDQ8WZ55 320 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 KIFAP3Q92845 792 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 C17orf75Q9HAS0 396 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 PDE11AQ9HCR9 933 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 RBM12Q9NTZ6 932 aaKnown RBP21.4■■□□□ 1.02
MBD3-209ENST00000592012 DMGDHQ9UI17 866 aaKnown RBP21.4■■□□□ 1.02
MBD3-209ENST00000592012 EXOC7Q9UPT5 735 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 LRRIQ3A6PVS8 624 aaPredicted RBP21.4■■□□□ 1.02
MBD3-209ENST00000592012 POLR3GO15318 223 aaPredicted RBP21.4■■□□□ 1.02
MBD3-209ENST00000592012 DKC1O60832 514 aaKnown RBP eCLIP21.4■■□□□ 1.02
MBD3-209ENST00000592012 CNGA1P29973 690 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 DNA2P51530 1060 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 SOX10P56693 466 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 ABHD15Q6UXT9 468 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 CCDC60Q8IWA6 550 aaPredicted RBP21.4■■□□□ 1.02
MBD3-209ENST00000592012 TPCN2Q8NHX9 752 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 SPIRE2Q8WWL2 714 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 HVCN1Q96D96 273 aa21.4■■□□□ 1.02
MBD3-209ENST00000592012 DENND3A2RUS2 1198 aa21.39■■□□□ 1.02
MBD3-209ENST00000592012 H3BQF6 201 aa21.39■■□□□ 1.02
MBD3-209ENST00000592012 PMM2O15305 246 aa21.39■■□□□ 1.02
MBD3-209ENST00000592012 MYBL2P10244 700 aa21.39■■□□□ 1.02
MBD3-209ENST00000592012 ACTR2P61160 394 aa21.39■■□□□ 1.02
MBD3-209ENST00000592012 GNPTABQ3T906 1256 aa21.39■■□□□ 1.02
MBD3-209ENST00000592012 UBE2TQ9NPD8 197 aaPredicted RBP21.39■■□□□ 1.02
MBD3-209ENST00000592012 KMT5AQ9NQR1 393 aa21.39■■□□□ 1.02
MBD3-209ENST00000592012 SNCAIPQ9Y6H5 919 aa21.39■■□□□ 1.02
MBD3-209ENST00000592012 PFASO15067 1338 aa21.39■■□□□ 1.02
MBD3-209ENST00000592012 DICER1Q9UPY3 1922 aaKnown RBP21.39■■□□□ 1.01
MBD3-209ENST00000592012 GOLGA8IPA6NC78 632 aa21.39■■□□□ 1.01
MBD3-209ENST00000592012 GOLGA8JA6NMD2 632 aa21.39■■□□□ 1.01
MBD3-209ENST00000592012 ADRB2P07550 413 aa21.39■■□□□ 1.01
MBD3-209ENST00000592012 GALCP54803 685 aa21.39■■□□□ 1.01
MBD3-209ENST00000592012 SP4Q02446 784 aa21.39■■□□□ 1.01
MBD3-209ENST00000592012 DLK2Q6UY11 383 aa21.39■■□□□ 1.01
MBD3-209ENST00000592012 TMEM117Q9H0C3 514 aa21.39■■□□□ 1.01
MBD3-209ENST00000592012 GOLPH3Q9H4A6 298 aa21.39■■□□□ 1.01
MBD3-209ENST00000592012 LCTP09848 1927 aa21.39■■□□□ 1.01
MBD3-209ENST00000592012 SP2Q02086 613 aa21.38■■□□□ 1.01
MBD3-209ENST00000592012 VGLL4Q14135 290 aa21.38■■□□□ 1.01
MBD3-209ENST00000592012 KIF22Q14807 665 aa21.38■■□□□ 1.01
MBD3-209ENST00000592012 RPS6KA1Q15418 735 aa21.38■■□□□ 1.01
MBD3-209ENST00000592012 SNRNP35Q16560 246 aaKnown RBP21.38■■□□□ 1.01
MBD3-209ENST00000592012 CBWD2Q8IUF1 395 aa21.38■■□□□ 1.01
MBD3-209ENST00000592012 RUBCNQ92622 972 aa21.38■■□□□ 1.01
MBD3-209ENST00000592012 HINFPQ9BQA5 517 aa21.38■■□□□ 1.01
MBD3-209ENST00000592012 MYH9P35579 1960 aaKnown RBP21.38■■□□□ 1.01
MBD3-209ENST00000592012 EIF3JO75822 258 aaKnown RBP21.38■■□□□ 1.01
MBD3-209ENST00000592012 DGAT1O75907 488 aa21.38■■□□□ 1.01
MBD3-209ENST00000592012 TREML2Q5T2D2 321 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms