RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 NDST4Q9H3R1 872 aa12.48□□□□□ -0.41
TUBD1-211ENST00000591548 CGNQ9P2M7 1197 aaKnown RBP12.48□□□□□ -0.41
TUBD1-211ENST00000591548 SUCLA2Q9P2R7 463 aaPredicted RBP12.48□□□□□ -0.41
TUBD1-211ENST00000591548 HAS3O00219 553 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 PES1O00541 588 aaKnown RBP12.47□□□□□ -0.41
TUBD1-211ENST00000591548 SLC16A3O15427 465 aaKnown RBP12.47□□□□□ -0.41
TUBD1-211ENST00000591548 MAGEB2O15479 319 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 FKTNO75072 461 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 GNRH1P01148 92 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
TUBD1-211ENST00000591548 CCND3P30281 292 aaPredicted RBP12.47□□□□□ -0.41
TUBD1-211ENST00000591548 ADSSP30520 456 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 DNM2P50570 870 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 CYP2J2P51589 502 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 GJA9P57773 515 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 SNRPFP62306 86 aaKnown RBP12.47□□□□□ -0.41
TUBD1-211ENST00000591548 PPFIA1Q13136 1202 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 MYBPC2Q14324 1141 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 MXD4Q14582 209 aaPredicted RBP12.47□□□□□ -0.41
TUBD1-211ENST00000591548 GRIK4Q16099 956 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 KIAA0753Q2KHM9 967 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 ARMCX5Q6P1M9 558 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 MTHFD1LQ6UB35 978 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 METTL13Q8N6R0 699 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 DEPTORQ8TB45 409 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 PPP1R13LQ8WUF5 828 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 CACTINQ8WUQ7 758 aaKnown RBP12.47□□□□□ -0.41
TUBD1-211ENST00000591548 ERO1AQ96HE7 468 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 CBWD1Q9BRT8 395 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 SETD4Q9NVD3 440 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 EXOC7Q9UPT5 735 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.47□□□□□ -0.41
TUBD1-211ENST00000591548 A0A1W2PQC6 194 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 K7ERI5 159 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 EDN1P05305 212 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 TPM2P07951 284 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 MYL3P08590 195 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 C6orf222P0C671 652 aaPredicted RBP12.47□□□□□ -0.41
TUBD1-211ENST00000591548 SRGAP2CP0DJJ0 459 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 SMIM10L2AP0DMW4 78 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 SMIM10L2BP0DMW5 78 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 SCP2P22307 547 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 ABCD1P33897 745 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 PSMC2P35998 433 aaKnown RBP12.47□□□□□ -0.41
TUBD1-211ENST00000591548 PURAQ00577 322 aaKnown RBP12.47□□□□□ -0.41
TUBD1-211ENST00000591548 MFSD10Q14728 455 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 BRDTQ58F21 947 aaPredicted RBP12.47□□□□□ -0.41
TUBD1-211ENST00000591548 MAP3K21Q5TCX8 1036 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 CDCA2Q69YH5 1023 aaPredicted RBP12.47□□□□□ -0.41
TUBD1-211ENST00000591548 RHPN2Q8IUC4 686 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 RNF149Q8NC42 400 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 RETREG2Q8NC44 543 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 ZSWIM2Q8NEG5 633 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 MKNK1Q9BUB5 465 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 UPF3AQ9H1J1 476 aaKnown RBP12.47□□□□□ -0.41
TUBD1-211ENST00000591548 PCIF1Q9H4Z3 704 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 TMEM134Q9H6X4 195 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
TUBD1-211ENST00000591548 HSPBP1Q9NZL4 362 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 ARMCX3Q9UH62 379 aaPredicted RBP12.47□□□□□ -0.41
TUBD1-211ENST00000591548 USP20Q9Y2K6 914 aa12.47□□□□□ -0.41
TUBD1-211ENST00000591548 ITIH6Q6UXX5 1313 aa12.46□□□□□ -0.41
TUBD1-211ENST00000591548 SIP14410 1827 aa12.46□□□□□ -0.41
TUBD1-211ENST00000591548 EXOC3O60645 756 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 PGK1P00558 417 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 HMGCRP04035 888 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 EPB41P11171 864 aaKnown RBP12.46□□□□□ -0.42
TUBD1-211ENST00000591548 PSEN2P49810 448 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 GSDMDP57764 484 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 CHMP4BP1P59074 171 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 NKX3-2P78367 333 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 GOLGA8FQ08AF8 430 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 GOLGA8DPQ0D2H9 430 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 LRMPQ12912 555 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 HIC1Q14526 733 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 LRRC8AQ8IWT6 810 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 FAM186BQ8IYM0 893 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 CCDC155Q8N6L0 562 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 RAET1EQ8TD07 263 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 PXYLP1Q8TE99 480 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 LMBR1Q8WVP7 490 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 ERGIC2Q96RQ1 377 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 CCDC113Q9H0I3 377 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 METTL14Q9HCE5 456 aaKnown RBP12.46□□□□□ -0.42
TUBD1-211ENST00000591548 TSKSQ9UJT2 592 aa12.46□□□□□ -0.42
TUBD1-211ENST00000591548 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.46□□□□□ -0.42
TUBD1-211ENST00000591548 RRN3P2A6NIE6 340 aa12.45□□□□□ -0.42
TUBD1-211ENST00000591548 HNRNPDLO14979 420 aaKnown RBP12.45□□□□□ -0.42
TUBD1-211ENST00000591548 ASAP2O43150 1006 aa12.45□□□□□ -0.42
TUBD1-211ENST00000591548 ADAMTS4O75173 837 aa12.45□□□□□ -0.42
TUBD1-211ENST00000591548 PIGRP01833 764 aa12.45□□□□□ -0.42
TUBD1-211ENST00000591548 GYPCP04921 128 aa12.45□□□□□ -0.42
TUBD1-211ENST00000591548 RARBP10826 455 aa12.45□□□□□ -0.42
TUBD1-211ENST00000591548 KLK7P49862 253 aa12.45□□□□□ -0.42
TUBD1-211ENST00000591548 EFNA5P52803 228 aa12.45□□□□□ -0.42
TUBD1-211ENST00000591548 ADAM17P78536 824 aa12.45□□□□□ -0.42
TUBD1-211ENST00000591548 RBL2Q08999 1139 aa12.45□□□□□ -0.42
TUBD1-211ENST00000591548 STRN3Q13033 797 aa12.45□□□□□ -0.42
TUBD1-211ENST00000591548 SYCP1Q15431 976 aa12.45□□□□□ -0.42
TUBD1-211ENST00000591548 GNASQ5JWF2 1037 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms