RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 LAMC2Q13753 1193 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 TRIM14Q14142 442 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 PLPPR4Q7Z2D5 763 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 KSR1Q8IVT5 923 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 RAET1EQ8TD07 263 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 RABGGTAQ92696 567 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 NDST4Q9H3R1 872 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 ABHD16BQ9H3Z7 469 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 XPNPEP1Q9NQW7 623 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 PTCH2Q9Y6C5 1203 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 EMSYQ7Z589 1322 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 MYH9P35579 1960 aaKnown RBP21.28■■□□□ 1
SPHK1-207ENST00000590959 MYH11P35749 1972 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.28■■□□□ 1
SPHK1-207ENST00000590959 ADCY3O60266 1144 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 GH1P01241 217 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 CCDC175P0C221 793 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 NCKAP1LP55160 1127 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 GTF2BQ00403 316 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 EMC2Q15006 297 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 GJC2Q5T442 439 aaPredicted RBP21.28■■□□□ 1
SPHK1-207ENST00000590959 HAUS6Q7Z4H7 955 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 SYCP3Q8IZU3 236 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 TRPV1Q8NER1 839 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 SPIRE2Q8WWL2 714 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 SLC7A3Q8WY07 619 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 DHX33Q9H6R0 707 aaKnown RBP21.28■■□□□ 1
SPHK1-207ENST00000590959 PPME1Q9Y570 386 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 MRFAP1Q9Y605 127 aa21.28■■□□□ 1
SPHK1-207ENST00000590959 CCDC169A6NNP5 214 aa21.27■■□□□ 1
SPHK1-207ENST00000590959 AKR1B15C9JRZ8 316 aaPredicted RBP21.27■■□□□ 1
SPHK1-207ENST00000590959 NKRFO15226 690 aaKnown RBP eCLIP21.27■■□□□ 1
SPHK1-207ENST00000590959 ADCY6O43306 1168 aa21.27■■□□□ 1
SPHK1-207ENST00000590959 ZNF865P0CJ78 1059 aaPredicted RBP21.27■■□□□ 1
SPHK1-207ENST00000590959 RFC5P40937 340 aa21.27■■□□□ 1
SPHK1-207ENST00000590959 ADCYAP1R1P41586 468 aa21.27■■□□□ 1
SPHK1-207ENST00000590959 SLC26A2P50443 739 aa21.27■■□□□ 1
SPHK1-207ENST00000590959 ARHGAP1Q07960 439 aa21.27■■□□□ 1
SPHK1-207ENST00000590959 BBXQ8WY36 941 aaPredicted RBP21.27■■□□□ 1
SPHK1-207ENST00000590959 ACCSQ96QU6 501 aa21.27■■□□□ 1
SPHK1-207ENST00000590959 NTPCRQ9BSD7 190 aaKnown RBP21.27■■□□□ 1
SPHK1-207ENST00000590959 KCNG1Q9UIX4 513 aa21.27■■□□□ 1
SPHK1-207ENST00000590959 ARID2Q68CP9 1835 aa21.26■□□□□ 0.99
SPHK1-207ENST00000590959 CLIC2O15247 247 aa21.26■□□□□ 0.99
SPHK1-207ENST00000590959 SLC16A4O15374 487 aa21.26■□□□□ 0.99
SPHK1-207ENST00000590959 NPTX2P47972 431 aa21.26■□□□□ 0.99
SPHK1-207ENST00000590959 GNG11P61952 73 aa21.26■□□□□ 0.99
SPHK1-207ENST00000590959 RBL2Q08999 1139 aa21.26■□□□□ 0.99
SPHK1-207ENST00000590959 TARBP2Q15633 366 aaKnown RBP21.26■□□□□ 0.99
SPHK1-207ENST00000590959 CARD6Q9BX69 1037 aa21.26■□□□□ 0.99
SPHK1-207ENST00000590959 SMARCAD1Q9H4L7 1026 aa21.26■□□□□ 0.99
SPHK1-207ENST00000590959 KMT5AQ9NQR1 393 aa21.26■□□□□ 0.99
SPHK1-207ENST00000590959 SLC16A3O15427 465 aaKnown RBP21.26■□□□□ 0.99
SPHK1-207ENST00000590959 ADKP55263 362 aaKnown RBP21.26■□□□□ 0.99
SPHK1-207ENST00000590959 ARHGEF6Q15052 776 aa21.26■□□□□ 0.99
SPHK1-207ENST00000590959 FRMD5Q7Z6J6 570 aa21.26■□□□□ 0.99
SPHK1-207ENST00000590959 TRIM59Q8IWR1 403 aa21.26■□□□□ 0.99
SPHK1-207ENST00000590959 EMID1Q96A84 441 aaPredicted RBP21.26■□□□□ 0.99
SPHK1-207ENST00000590959 HVCN1Q96D96 273 aa21.26■□□□□ 0.99
SPHK1-207ENST00000590959 IFT74Q96LB3 600 aa21.26■□□□□ 0.99
SPHK1-207ENST00000590959 ERGIC2Q96RQ1 377 aa21.26■□□□□ 0.99
SPHK1-207ENST00000590959 CEP89Q96ST8 783 aa21.26■□□□□ 0.99
SPHK1-207ENST00000590959 AGPAT3Q9NRZ7 376 aa21.26■□□□□ 0.99
SPHK1-207ENST00000590959 GYPCP04921 128 aa21.25■□□□□ 0.99
SPHK1-207ENST00000590959 EPB41P11171 864 aaKnown RBP21.25■□□□□ 0.99
SPHK1-207ENST00000590959 CTCFP49711 727 aaPredicted RBP21.25■□□□□ 0.99
SPHK1-207ENST00000590959 SOX10P56693 466 aa21.25■□□□□ 0.99
SPHK1-207ENST00000590959 CACNB2Q08289 660 aaPredicted RBP21.25■□□□□ 0.99
SPHK1-207ENST00000590959 GOLGA8FQ08AF8 430 aa21.25■□□□□ 0.99
SPHK1-207ENST00000590959 GOLGA8DPQ0D2H9 430 aa21.25■□□□□ 0.99
SPHK1-207ENST00000590959 RSRC2Q7L4I2 434 aaKnown RBP21.25■□□□□ 0.99
SPHK1-207ENST00000590959 TRIM50Q86XT4 487 aa21.25■□□□□ 0.99
SPHK1-207ENST00000590959 CNGA4Q8IV77 575 aa21.25■□□□□ 0.99
SPHK1-207ENST00000590959 TMEM161BQ8NDZ6 487 aa21.25■□□□□ 0.99
SPHK1-207ENST00000590959 ATP8B4Q8TF62 1192 aa21.25■□□□□ 0.99
SPHK1-207ENST00000590959 CPLX3Q8WVH0 158 aa21.25■□□□□ 0.99
SPHK1-207ENST00000590959 GOLGA1Q92805 767 aa21.25■□□□□ 0.99
SPHK1-207ENST00000590959 POLR3FQ9H1D9 316 aaPredicted RBP21.25■□□□□ 0.99
SPHK1-207ENST00000590959 METTL14Q9HCE5 456 aaKnown RBP21.25■□□□□ 0.99
SPHK1-207ENST00000590959 ARMCX3Q9UH62 379 aaPredicted RBP21.25■□□□□ 0.99
SPHK1-207ENST00000590959 FAM184BQ9ULE4 1060 aa21.25■□□□□ 0.99
SPHK1-207ENST00000590959 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.25■□□□□ 0.99
SPHK1-207ENST00000590959 CASP14P31944 242 aa21.24■□□□□ 0.99
SPHK1-207ENST00000590959 PPP2R3AQ06190 1150 aa21.24■□□□□ 0.99
SPHK1-207ENST00000590959 PPTC7Q8NI37 304 aa21.24■□□□□ 0.99
SPHK1-207ENST00000590959 BSNDQ8WZ55 320 aa21.24■□□□□ 0.99
SPHK1-207ENST00000590959 LENG1Q96BZ8 264 aaPredicted RBP21.24■□□□□ 0.99
SPHK1-207ENST00000590959 EXOC7Q9UPT5 735 aa21.24■□□□□ 0.99
SPHK1-207ENST00000590959 PTPN22Q9Y2R2 807 aa21.24■□□□□ 0.99
SPHK1-207ENST00000590959 H0YCG3 227 aa21.24■□□□□ 0.99
SPHK1-207ENST00000590959 AKAP3O75969 853 aa21.24■□□□□ 0.99
SPHK1-207ENST00000590959 MARK3P27448 753 aa21.24■□□□□ 0.99
SPHK1-207ENST00000590959 ABCD1P33897 745 aa21.24■□□□□ 0.99
SPHK1-207ENST00000590959 SNRPFP62306 86 aaKnown RBP21.24■□□□□ 0.99
SPHK1-207ENST00000590959 MYBPC2Q14324 1141 aa21.24■□□□□ 0.99
SPHK1-207ENST00000590959 DUSP28Q4G0W2 176 aa21.24■□□□□ 0.99
SPHK1-207ENST00000590959 IQSEC1Q6DN90 963 aa21.24■□□□□ 0.99
SPHK1-207ENST00000590959 PXYLP1Q8TE99 480 aa21.24■□□□□ 0.99
SPHK1-207ENST00000590959 NUP58Q9BVL2 599 aa21.24■□□□□ 0.99
SPHK1-207ENST00000590959 IKZF4Q9H2S9 585 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms