RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 CCSER1Q9C0I3 900 aa20.82■□□□□ 0.92
ERCC1-207ENST00000588738 MTUS1Q9ULD2 1270 aa20.82■□□□□ 0.92
ERCC1-207ENST00000588738 FNDC1Q4ZHG4 1894 aaPredicted RBP20.81■□□□□ 0.92
ERCC1-207ENST00000588738 HOXA2O43364 376 aa20.81■□□□□ 0.92
ERCC1-207ENST00000588738 SSBP05455 408 aaKnown RBP eCLIP20.81■□□□□ 0.92
ERCC1-207ENST00000588738 AXLP30530 894 aa20.81■□□□□ 0.92
ERCC1-207ENST00000588738 NAMPTP43490 491 aa20.81■□□□□ 0.92
ERCC1-207ENST00000588738 MBTD1Q05BQ5 628 aa20.81■□□□□ 0.92
ERCC1-207ENST00000588738 C1orf186Q6ZWK4 172 aa20.81■□□□□ 0.92
ERCC1-207ENST00000588738 SPRED2Q7Z698 418 aa20.81■□□□□ 0.92
ERCC1-207ENST00000588738 ZBTB8OSQ8IWT0 167 aa20.81■□□□□ 0.92
ERCC1-207ENST00000588738 KRI1Q8N9T8 703 aaKnown RBP20.81■□□□□ 0.92
ERCC1-207ENST00000588738 LINC00301Q8NCQ3 95 aa20.81■□□□□ 0.92
ERCC1-207ENST00000588738 EPSTI1Q96J88 318 aa20.81■□□□□ 0.92
ERCC1-207ENST00000588738 C17orf80Q9BSJ5 609 aa20.81■□□□□ 0.92
ERCC1-207ENST00000588738 TIPINQ9BVW5 301 aa20.81■□□□□ 0.92
ERCC1-207ENST00000588738 C2orf40Q9H1Z8 148 aa20.81■□□□□ 0.92
ERCC1-207ENST00000588738 COL6A3P12111 3177 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 RFXAPO00287 272 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 PLA2G4BP0C869 781 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 IGFBP4P22692 258 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 HOXA11P31270 313 aaPredicted RBP20.8■□□□□ 0.92
ERCC1-207ENST00000588738 TXLNAP40222 546 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 RAB27AP51159 221 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 KARSQ15046 597 aaKnown RBP20.8■□□□□ 0.92
ERCC1-207ENST00000588738 FOXD4L6Q3SYB3 417 aaPredicted RBP20.8■□□□□ 0.92
ERCC1-207ENST00000588738 PAN2Q504Q3 1202 aaKnown RBP20.8■□□□□ 0.92
ERCC1-207ENST00000588738 SPECC1Q5M775 1068 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 ATL3Q6DD88 541 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 FOXD4L3Q6VB84 417 aaPredicted RBP20.8■□□□□ 0.92
ERCC1-207ENST00000588738 TMEM192Q8IY95 271 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 RNF169Q8NCN4 708 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 FBXO22Q8NEZ5 403 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 DRC1Q96MC2 740 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 CLIC6Q96NY7 704 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 RUSC1Q9BVN2 902 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 POLD4Q9HCU8 107 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 KCND2Q9NZV8 630 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 CCDC39Q9UFE4 941 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 RWDD3Q9Y3V2 267 aa20.8■□□□□ 0.92
ERCC1-207ENST00000588738 MYH11P35749 1972 aa20.79■□□□□ 0.92
ERCC1-207ENST00000588738 EPOPA6NHQ4 379 aa20.79■□□□□ 0.92
ERCC1-207ENST00000588738 SPTLC2O15270 562 aa20.79■□□□□ 0.92
ERCC1-207ENST00000588738 HIP1RO75146 1068 aa20.79■□□□□ 0.92
ERCC1-207ENST00000588738 YEATS4O95619 227 aa20.79■□□□□ 0.92
ERCC1-207ENST00000588738 PLCG1P19174 1290 aa20.79■□□□□ 0.92
ERCC1-207ENST00000588738 GUCY2CP25092 1073 aa20.79■□□□□ 0.92
ERCC1-207ENST00000588738 SLC12A3P55017 1021 aa20.79■□□□□ 0.92
ERCC1-207ENST00000588738 EPC2Q52LR7 807 aa20.79■□□□□ 0.92
ERCC1-207ENST00000588738 CDCA2Q69YH5 1023 aaPredicted RBP20.79■□□□□ 0.92
ERCC1-207ENST00000588738 ABI1Q8IZP0 508 aa20.79■□□□□ 0.92
ERCC1-207ENST00000588738 DEPTORQ8TB45 409 aa20.79■□□□□ 0.92
ERCC1-207ENST00000588738 BSNDQ8WZ55 320 aa20.79■□□□□ 0.92
ERCC1-207ENST00000588738 SYMPKQ92797 1274 aaKnown RBP20.79■□□□□ 0.92
ERCC1-207ENST00000588738 CLP1Q92989 425 aaKnown RBP20.79■□□□□ 0.92
ERCC1-207ENST00000588738 FAM105AQ9NUU6 356 aa20.79■□□□□ 0.92
ERCC1-207ENST00000588738 DAXXQ9UER7 740 aaPredicted RBP20.79■□□□□ 0.92
ERCC1-207ENST00000588738 TBKBP1A7MCY6 615 aa20.78■□□□□ 0.92
ERCC1-207ENST00000588738 TSPAN1O60635 241 aa20.78■□□□□ 0.92
ERCC1-207ENST00000588738 ZNF623O75123 536 aa20.78■□□□□ 0.92
ERCC1-207ENST00000588738 PPP6R2O75170 966 aa20.78■□□□□ 0.92
ERCC1-207ENST00000588738 FGFR1P11362 822 aa20.78■□□□□ 0.92
ERCC1-207ENST00000588738 GATMP50440 423 aa20.78■□□□□ 0.92
ERCC1-207ENST00000588738 ADGRE1Q14246 886 aa20.78■□□□□ 0.92
ERCC1-207ENST00000588738 NOTUMQ6P988 496 aa20.78■□□□□ 0.92
ERCC1-207ENST00000588738 USP49Q70CQ1 688 aa20.78■□□□□ 0.92
ERCC1-207ENST00000588738 ZNF598Q86UK7 904 aaKnown RBP20.78■□□□□ 0.92
ERCC1-207ENST00000588738 CCDC51Q96ER9 411 aa20.78■□□□□ 0.92
ERCC1-207ENST00000588738 PRIMPOLQ96LW4 560 aa20.78■□□□□ 0.92
ERCC1-207ENST00000588738 TMEM117Q9H0C3 514 aa20.78■□□□□ 0.92
ERCC1-207ENST00000588738 C17orf75Q9HAS0 396 aa20.78■□□□□ 0.92
ERCC1-207ENST00000588738 PRMT7Q9NVM4 692 aaPredicted RBP20.78■□□□□ 0.92
ERCC1-207ENST00000588738 CFAP45Q9UL16 551 aa20.78■□□□□ 0.92
ERCC1-207ENST00000588738 COL4A4P53420 1690 aaPredicted RBP20.77■□□□□ 0.92
ERCC1-207ENST00000588738 GTPBP6O43824 516 aaPredicted RBP20.77■□□□□ 0.92
ERCC1-207ENST00000588738 BRD1O95696 1058 aa20.77■□□□□ 0.92
ERCC1-207ENST00000588738 CTNNB1P35222 781 aa20.77■□□□□ 0.92
ERCC1-207ENST00000588738 BMPR1AP36894 532 aa20.77■□□□□ 0.92
ERCC1-207ENST00000588738 EFNA5P52803 228 aa20.77■□□□□ 0.92
ERCC1-207ENST00000588738 MAPK6Q16659 721 aa20.77■□□□□ 0.92
ERCC1-207ENST00000588738 AMHR2Q16671 573 aa20.77■□□□□ 0.92
ERCC1-207ENST00000588738 MAFAQ8NHW3 353 aaPredicted RBP20.77■□□□□ 0.92
ERCC1-207ENST00000588738 RAD54LQ92698 747 aa20.77■□□□□ 0.92
ERCC1-207ENST00000588738 PGBD4Q96DM1 585 aa20.77■□□□□ 0.92
ERCC1-207ENST00000588738 CPB2Q96IY4 423 aa20.77■□□□□ 0.92
ERCC1-207ENST00000588738 FZD8Q9H461 694 aa20.77■□□□□ 0.92
ERCC1-207ENST00000588738 BLOC1S4Q9NUP1 217 aa20.77■□□□□ 0.92
ERCC1-207ENST00000588738 PCDHB2Q9Y5E7 798 aa20.77■□□□□ 0.92
ERCC1-207ENST00000588738 MRPL42Q9Y6G3 142 aaKnown RBP20.77■□□□□ 0.92
ERCC1-207ENST00000588738 KIAA1671Q9BY89 1806 aa20.76■□□□□ 0.91
ERCC1-207ENST00000588738 CCDC169A6NNP5 214 aa20.76■□□□□ 0.91
ERCC1-207ENST00000588738 RB1P06400 928 aa20.76■□□□□ 0.91
ERCC1-207ENST00000588738 LINC00271P0C7V0 271 aa20.76■□□□□ 0.91
ERCC1-207ENST00000588738 ATF7P17544 494 aaPredicted RBP20.76■□□□□ 0.91
ERCC1-207ENST00000588738 ARF4P18085 180 aaPredicted RBP20.76■□□□□ 0.91
ERCC1-207ENST00000588738 POU3F3P20264 500 aaPredicted RBP20.76■□□□□ 0.91
ERCC1-207ENST00000588738 DDIT3P35638 169 aa20.76■□□□□ 0.91
ERCC1-207ENST00000588738 PEX3P56589 373 aa20.76■□□□□ 0.91
ERCC1-207ENST00000588738 RAD51AP2Q09MP3 1159 aa20.76■□□□□ 0.91
ERCC1-207ENST00000588738 DMP1Q13316 513 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms