RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 A0A0U1RQF3 1178 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 FAM86C2PA6NEL3 165 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 LRRIQ4A6NIV6 560 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 C5orf67F2Z3F1 127 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 ASAP2O43150 1006 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 HOXA2O43364 376 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 ERLIN2O94905 339 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 ITGB1P05556 798 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 LIG1P18858 919 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 KCNA5P22460 613 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 DNAJB1P25685 340 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 RPA1P27694 616 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 PBX3P40426 434 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 FXR2P51116 673 aaKnown RBP eCLIP9.83□□□□□ -0.84
SDF2-207ENST00000588472 NCBP1Q09161 790 aaKnown RBP9.83□□□□□ -0.84
SDF2-207ENST00000588472 MXD4Q14582 209 aaPredicted RBP9.83□□□□□ -0.84
SDF2-207ENST00000588472 IL17AQ16552 155 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 ECM1Q16610 540 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 CLLU1OSQ5K130 101 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 PADI6Q6TGC4 694 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 LRRC55Q6ZSA7 311 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 SRGAP1Q7Z6B7 1085 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 THNSL1Q8IYQ7 743 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 SNX29Q8TEQ0 813 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 POF1BQ8WVV4 589 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 CPB2Q96IY4 423 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 CASD1Q96PB1 797 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 PLIN2Q99541 437 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 PLVAPQ9BX97 442 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 RAB34Q9BZG1 259 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 TMEM117Q9H0C3 514 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 CHST12Q9NRB3 414 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 AGPAT5Q9NUQ2 364 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 FAM105AQ9NUU6 356 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 DDX19AQ9NUU7 478 aaKnown RBP9.83□□□□□ -0.84
SDF2-207ENST00000588472 RNF19AQ9NV58 838 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 COL4A6Q14031 1691 aa9.83□□□□□ -0.84
SDF2-207ENST00000588472 ARID2Q68CP9 1835 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 VWA3AA6NCI4 1184 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 MEIS3P2A8K0S8 358 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 FGF18O76093 207 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 EOMESO95936 686 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 XRCC6P12956 609 aaKnown RBP eCLIP9.82□□□□□ -0.84
SDF2-207ENST00000588472 ATF7P17544 494 aaPredicted RBP9.82□□□□□ -0.84
SDF2-207ENST00000588472 GLRA2P23416 452 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 CA8P35219 290 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 GTF2F1P35269 517 aaKnown RBP eCLIP9.82□□□□□ -0.84
SDF2-207ENST00000588472 ARL2P36404 184 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 PTENP60484 403 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 CAPSQ13938 189 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 TMEM132AQ24JP5 1023 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 TIGD5Q53EQ6 642 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 RILPL1Q5EBL4 403 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 KRT79Q5XKE5 535 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 HAUS3Q68CZ6 603 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 RBM23Q86U06 439 aaKnown RBP9.82□□□□□ -0.84
SDF2-207ENST00000588472 CDR2LQ86X02 465 aaPredicted RBP9.82□□□□□ -0.84
SDF2-207ENST00000588472 COLGALT1Q8NBJ5 622 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 SPPL3Q8TCT6 385 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 APOL6Q9BWW8 343 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 GBP3Q9H0R5 595 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 BHMT2Q9H2M3 363 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 NSUN3Q9H649 340 aaKnown RBP9.82□□□□□ -0.84
SDF2-207ENST00000588472 CWH43Q9H720 699 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 UBE2ZQ9H832 354 aaPredicted RBP9.82□□□□□ -0.84
SDF2-207ENST00000588472 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.82□□□□□ -0.84
SDF2-207ENST00000588472 CLDND1Q9NY35 253 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 DBR1Q9UK59 544 aaKnown RBP9.82□□□□□ -0.84
SDF2-207ENST00000588472 PCDHB2Q9Y5E7 798 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 PCDHGC5Q9Y5F6 944 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 RALGAPA2Q2PPJ7 1873 aa9.82□□□□□ -0.84
SDF2-207ENST00000588472 PRR33A8MZF0 331 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 NT5C1B-RDH14C9J2C7 533 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 E9PMD0 336 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 PI4K2BG5E9Z4 385 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 H3BQ06 376 aaPredicted RBP9.81□□□□□ -0.84
SDF2-207ENST00000588472 SSBP05455 408 aaKnown RBP eCLIP9.81□□□□□ -0.84
SDF2-207ENST00000588472 SKIP12755 728 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 LAG3P18627 525 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 HOXA11P31270 313 aaPredicted RBP9.81□□□□□ -0.84
SDF2-207ENST00000588472 IRS1P35568 1242 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 RNASELQ05823 741 aaKnown RBP9.81□□□□□ -0.84
SDF2-207ENST00000588472 CUL4AQ13619 759 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 PDIA5Q14554 519 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 CLUL1Q15846 466 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 KCNT2Q6UVM3 1135 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 GLB1LQ6UWU2 654 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 FAM43BQ6ZT52 329 aaPredicted RBP9.81□□□□□ -0.84
SDF2-207ENST00000588472 ZNF598Q86UK7 904 aaKnown RBP9.81□□□□□ -0.84
SDF2-207ENST00000588472 LRRC43Q8N309 656 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 MCPH1Q8NEM0 835 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 KHSRPQ92945 711 aaKnown RBP eCLIP9.81□□□□□ -0.84
SDF2-207ENST00000588472 P2RX5Q93086 422 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 PGBD4Q96DM1 585 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 ZNF558Q96NG5 402 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 EIF2AQ9BY44 585 aaKnown RBP9.81□□□□□ -0.84
SDF2-207ENST00000588472 TRIM6Q9C030 488 aaPredicted RBP9.81□□□□□ -0.84
SDF2-207ENST00000588472 LMAN2LQ9H0V9 348 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 C11orf16Q9NQ32 467 aa9.81□□□□□ -0.84
SDF2-207ENST00000588472 DNM3Q9UQ16 869 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms