RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 ZBTB8OSQ8IWT0 167 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 TMEM192Q8IY95 271 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 ABI1Q8IZP0 508 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 CNNM3Q8NE01 707 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 FBXO22Q8NEZ5 403 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 PGBD4Q96DM1 585 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 CCDC51Q96ER9 411 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 PRIMPOLQ96LW4 560 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 DRC1Q96MC2 740 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 PNMA5Q96PV4 448 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 TMEM117Q9H0C3 514 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 MINDY3Q9H8M7 445 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 CERS4Q9HA82 394 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 GPRC5CQ9NQ84 441 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 CCDC39Q9UFE4 941 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 PTPRSQ13332 1948 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 PHLPP2Q6ZVD8 1323 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 LRRIQ4A6NIV6 560 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 H3BNC9 293 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 RBAK-RBAKDNI3L0D1 243 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 PPP6R2O75170 966 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 F13A1P00488 732 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 IGFBP4P22692 258 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 GUCY2CP25092 1073 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 MARCKSP29966 332 aaPredicted RBP11.18□□□□□ -0.62
TPM4-207ENST00000588032 HOXA11P31270 313 aaPredicted RBP11.18□□□□□ -0.62
TPM4-207ENST00000588032 TXLNAP40222 546 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 EFNA5P52803 228 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 CEBPZQ03701 1054 aaKnown RBP11.18□□□□□ -0.62
TPM4-207ENST00000588032 MBTD1Q05BQ5 628 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 STK38Q15208 465 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 PTPROQ16827 1216 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 FAM187BQ17R55 369 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 CDCA2Q69YH5 1023 aaPredicted RBP11.18□□□□□ -0.62
TPM4-207ENST00000588032 RINT1Q6NUQ1 792 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 NOTUMQ6P988 496 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 ZNF598Q86UK7 904 aaKnown RBP11.18□□□□□ -0.62
TPM4-207ENST00000588032 KRI1Q8N9T8 703 aaKnown RBP11.18□□□□□ -0.62
TPM4-207ENST00000588032 SPRYD3Q8NCJ5 442 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 LINC00301Q8NCQ3 95 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 RASSF8Q8NHQ8 419 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 MAFAQ8NHW3 353 aaPredicted RBP11.18□□□□□ -0.62
TPM4-207ENST00000588032 DEPTORQ8TB45 409 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 USP28Q96RU2 1077 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 C17orf80Q9BSJ5 609 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 C11orf84Q9BUA3 381 aaPredicted RBP11.18□□□□□ -0.62
TPM4-207ENST00000588032 CSRNP2Q9H175 543 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 AAASQ9NRG9 546 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 FAM105AQ9NUU6 356 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 PRMT7Q9NVM4 692 aaPredicted RBP11.18□□□□□ -0.62
TPM4-207ENST00000588032 FBXO2Q9UK22 296 aaPredicted RBP11.18□□□□□ -0.62
TPM4-207ENST00000588032 CFAP45Q9UL16 551 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 GBF1Q92538 1859 aa11.18□□□□□ -0.62
TPM4-207ENST00000588032 LOXHD1Q8IVV2 1947 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 ARID2Q68CP9 1835 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 CARNS1A5YM72 827 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 EPOPA6NHQ4 379 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 TBKBP1A7MCY6 615 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 TSPAN1O60635 241 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 YEATS4O95619 227 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 SSBP05455 408 aaKnown RBP eCLIP11.17□□□□□ -0.62
TPM4-207ENST00000588032 PLA2G4BP0C869 781 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 IBSPP21815 317 aaPredicted RBP11.17□□□□□ -0.62
TPM4-207ENST00000588032 DDIT3P35638 169 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 SLC12A3P55017 1021 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 GRIN1Q05586 938 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 ADGRE1Q14246 886 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 MAPK6Q16659 721 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 CSPP1Q1MSJ5 1256 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 KCNK18Q7Z418 384 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 MRPL10Q7Z7H8 261 aaKnown RBP11.17□□□□□ -0.62
TPM4-207ENST00000588032 P2RX5Q93086 422 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 PLIN2Q99541 437 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 NTPCRQ9BSD7 190 aaKnown RBP11.17□□□□□ -0.62
TPM4-207ENST00000588032 MRPL9Q9BYD2 267 aaKnown RBP11.17□□□□□ -0.62
TPM4-207ENST00000588032 FZD8Q9H461 694 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 UBN1Q9NPG3 1134 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 MTUS1Q9ULD2 1270 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 RBM19Q9Y4C8 960 aaKnown RBP11.17□□□□□ -0.62
TPM4-207ENST00000588032 PCDHB2Q9Y5E7 798 aa11.17□□□□□ -0.62
TPM4-207ENST00000588032 MRPL42Q9Y6G3 142 aaKnown RBP11.17□□□□□ -0.62
TPM4-207ENST00000588032 CNTNAP2Q9UHC6 1331 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 A0A1B0GUA9 196 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 RFXAPO00287 272 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 ACKR2O00590 384 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 SPTLC2O15270 562 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 LPXNO60711 386 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 HIP1RO75146 1068 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 LINC00271P0C7V0 271 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 FGFR1P11362 822 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 ARF4P18085 180 aaPredicted RBP11.16□□□□□ -0.62
TPM4-207ENST00000588032 NCLP19338 710 aaKnown RBP11.16□□□□□ -0.62
TPM4-207ENST00000588032 SCP2P22307 547 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 CTNNB1P35222 781 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 SMTNP53814 917 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 DMP1Q13316 513 aaPredicted RBP11.16□□□□□ -0.62
TPM4-207ENST00000588032 GPM6BQ13491 265 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 AMHR2Q16671 573 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 PAN2Q504Q3 1202 aaKnown RBP11.16□□□□□ -0.62
TPM4-207ENST00000588032 GLB1LQ6UWU2 654 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms