RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 ZNF579Q8NAF0 562 aaKnown RBP15.87■□□□□ 0.13
ERCC1-205ENST00000587888 ASIC4Q96FT7 647 aa15.87■□□□□ 0.13
ERCC1-205ENST00000587888 ADAM7Q9H2U9 754 aa15.87■□□□□ 0.13
ERCC1-205ENST00000587888 NRDE2Q9H7Z3 1164 aa15.87■□□□□ 0.13
ERCC1-205ENST00000587888 CYP26B1Q9NR63 512 aa15.87■□□□□ 0.13
ERCC1-205ENST00000587888 FAM105AQ9NUU6 356 aa15.87■□□□□ 0.13
ERCC1-205ENST00000587888 NR2E1Q9Y466 385 aa15.87■□□□□ 0.13
ERCC1-205ENST00000587888 MUC6Q6W4X9 2439 aa15.86■□□□□ 0.13
ERCC1-205ENST00000587888 CCDC194A0A1B0GVG4 234 aa15.86■□□□□ 0.13
ERCC1-205ENST00000587888 MARCH6O60337 910 aa15.86■□□□□ 0.13
ERCC1-205ENST00000587888 OFD1O75665 1012 aa15.86■□□□□ 0.13
ERCC1-205ENST00000587888 GALTP07902 379 aa15.86■□□□□ 0.13
ERCC1-205ENST00000587888 QARSP47897 775 aaKnown RBP15.86■□□□□ 0.13
ERCC1-205ENST00000587888 ITIH3Q06033 890 aa15.86■□□□□ 0.13
ERCC1-205ENST00000587888 RARS2Q5T160 578 aaKnown RBP15.86■□□□□ 0.13
ERCC1-205ENST00000587888 MOXD1Q6UVY6 613 aa15.86■□□□□ 0.13
ERCC1-205ENST00000587888 DDX53Q86TM3 631 aaKnown RBP15.86■□□□□ 0.13
ERCC1-205ENST00000587888 TMEM143Q96AN5 459 aa15.86■□□□□ 0.13
ERCC1-205ENST00000587888 IGSF21Q96ID5 467 aa15.86■□□□□ 0.13
ERCC1-205ENST00000587888 CEP170P1Q96L14 293 aa15.86■□□□□ 0.13
ERCC1-205ENST00000587888 JPH2Q9BR39 696 aaPredicted RBP15.86■□□□□ 0.13
ERCC1-205ENST00000587888 TRAIPQ9BWF2 469 aa15.86■□□□□ 0.13
ERCC1-205ENST00000587888 TM6SF1Q9BZW5 370 aa15.86■□□□□ 0.13
ERCC1-205ENST00000587888 POMKQ9H5K3 350 aa15.86■□□□□ 0.13
ERCC1-205ENST00000587888 BMP2KQ9NSY1 1161 aaPredicted RBP15.86■□□□□ 0.13
ERCC1-205ENST00000587888 TBC1D13Q9NVG8 400 aa15.86■□□□□ 0.13
ERCC1-205ENST00000587888 DNAJB4Q9UDY4 337 aa15.86■□□□□ 0.13
ERCC1-205ENST00000587888 CCNT1O60563 726 aaKnown RBP15.85■□□□□ 0.13
ERCC1-205ENST00000587888 EPCAMP16422 314 aa15.85■□□□□ 0.13
ERCC1-205ENST00000587888 PTPN5P54829 565 aa15.85■□□□□ 0.13
ERCC1-205ENST00000587888 PPP2R5CQ13362 524 aa15.85■□□□□ 0.13
ERCC1-205ENST00000587888 ZNF280BQ86YH2 543 aa15.85■□□□□ 0.13
ERCC1-205ENST00000587888 KREMEN2Q8NCW0 462 aa15.85■□□□□ 0.13
ERCC1-205ENST00000587888 BCL7CQ8WUZ0 217 aaPredicted RBP15.85■□□□□ 0.13
ERCC1-205ENST00000587888 PRPF31Q8WWY3 499 aaKnown RBP15.85■□□□□ 0.13
ERCC1-205ENST00000587888 SLC7A3Q8WY07 619 aa15.85■□□□□ 0.13
ERCC1-205ENST00000587888 PGBD4Q96DM1 585 aa15.85■□□□□ 0.13
ERCC1-205ENST00000587888 FAM20AQ96MK3 541 aa15.85■□□□□ 0.13
ERCC1-205ENST00000587888 PHF20Q9BVI0 1012 aa15.85■□□□□ 0.13
ERCC1-205ENST00000587888 ZBP1Q9H171 429 aa15.85■□□□□ 0.13
ERCC1-205ENST00000587888 IFT122Q9HBG6 1241 aa15.85■□□□□ 0.13
ERCC1-205ENST00000587888 GJB4Q9NTQ9 266 aa15.85■□□□□ 0.13
ERCC1-205ENST00000587888 PCDHB2Q9Y5E7 798 aa15.85■□□□□ 0.13
ERCC1-205ENST00000587888 COL4A3BPQ9Y5P4 624 aa15.85■□□□□ 0.13
ERCC1-205ENST00000587888 C2CD4DB7Z1M9 353 aa15.84■□□□□ 0.13
ERCC1-205ENST00000587888 DKC1O60832 514 aaKnown RBP eCLIP15.84■□□□□ 0.13
ERCC1-205ENST00000587888 ZNF623O75123 536 aa15.84■□□□□ 0.13
ERCC1-205ENST00000587888 SSBP05455 408 aaKnown RBP eCLIP15.84■□□□□ 0.13
ERCC1-205ENST00000587888 P4HBP07237 508 aaKnown RBP15.84■□□□□ 0.13
ERCC1-205ENST00000587888 AVPR2P30518 371 aa15.84■□□□□ 0.13
ERCC1-205ENST00000587888 MTHFRP42898 656 aa15.84■□□□□ 0.13
ERCC1-205ENST00000587888 SLC11A1P49279 550 aa15.84■□□□□ 0.13
ERCC1-205ENST00000587888 RAB27AP51159 221 aa15.84■□□□□ 0.13
ERCC1-205ENST00000587888 POLGP54098 1239 aaPredicted RBP15.84■□□□□ 0.13
ERCC1-205ENST00000587888 VCPP55072 806 aaKnown RBP15.84■□□□□ 0.13
ERCC1-205ENST00000587888 SCRN1Q12765 414 aa15.84■□□□□ 0.13
ERCC1-205ENST00000587888 ATAT1Q5SQI0 421 aa15.84■□□□□ 0.13
ERCC1-205ENST00000587888 PIK3AP1Q6ZUJ8 805 aa15.84■□□□□ 0.13
ERCC1-205ENST00000587888 NEK8Q86SG6 692 aa15.84■□□□□ 0.13
ERCC1-205ENST00000587888 FAM177A1Q8N128 213 aaPredicted RBP15.84■□□□□ 0.13
ERCC1-205ENST00000587888 OXER1Q8TDS5 423 aa15.84■□□□□ 0.13
ERCC1-205ENST00000587888 RIPOR3Q96MK2 946 aa15.84■□□□□ 0.13
ERCC1-205ENST00000587888 NECTIN4Q96NY8 510 aa15.84■□□□□ 0.13
ERCC1-205ENST00000587888 PRRX2Q99811 253 aa15.84■□□□□ 0.13
ERCC1-205ENST00000587888 RGL1Q9NZL6 768 aa15.84■□□□□ 0.13
ERCC1-205ENST00000587888 WRAP73Q9P2S5 460 aaPredicted RBP15.84■□□□□ 0.13
ERCC1-205ENST00000587888 VAV3Q9UKW4 847 aa15.84■□□□□ 0.13
ERCC1-205ENST00000587888 EPB41L2O43491 1005 aaKnown RBP15.83■□□□□ 0.12
ERCC1-205ENST00000587888 CDKL5O76039 1030 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 DDHD2O94830 711 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 PDGFBP01127 241 aaPredicted RBP15.83■□□□□ 0.12
ERCC1-205ENST00000587888 CTSAP10619 480 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 XBP1P17861 261 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 AFF1P51825 1210 aaKnown RBP15.83■□□□□ 0.12
ERCC1-205ENST00000587888 LAMTOR4Q0VGL1 99 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 TCF15Q12870 199 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 GIT2Q14161 759 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 NCAPH2Q6IBW4 605 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 PPP4R3AQ6IN85 833 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 AGMOQ6ZNB7 445 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 EXOC8Q8IYI6 725 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 URGCPQ8TCY9 931 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 SLC22A17Q8WUG5 538 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 PSPC1Q8WXF1 523 aaKnown RBP15.83■□□□□ 0.12
ERCC1-205ENST00000587888 HAS1Q92839 578 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 DYDC2Q96IM9 177 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 FAM193BQ96PV7 902 aaPredicted RBP15.83■□□□□ 0.12
ERCC1-205ENST00000587888 MINDY3Q9H8M7 445 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 KCNMB3Q9NPA1 279 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 AGPAT5Q9NUQ2 364 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 LIMD1Q9UGP4 676 aa15.83■□□□□ 0.12
ERCC1-205ENST00000587888 DBR1Q9UK59 544 aaKnown RBP15.83■□□□□ 0.12
ERCC1-205ENST00000587888 SPDYE4A6NLX3 237 aa15.82■□□□□ 0.12
ERCC1-205ENST00000587888 ZBTB39O15060 712 aa15.82■□□□□ 0.12
ERCC1-205ENST00000587888 B4GALT3O60512 393 aa15.82■□□□□ 0.12
ERCC1-205ENST00000587888 POMCP01189 267 aa15.82■□□□□ 0.12
ERCC1-205ENST00000587888 ALDH2P05091 517 aa15.82■□□□□ 0.12
ERCC1-205ENST00000587888 GCFC2P16383 781 aaKnown RBP15.82■□□□□ 0.12
ERCC1-205ENST00000587888 KLRC2P26717 231 aa15.82■□□□□ 0.12
ERCC1-205ENST00000587888 CTTNQ14247 550 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms