RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 SLC39A11Q8N1S5 342 aa17.59■□□□□ 0.41
NCLN-203ENST00000587740 ZNF577Q9BSK1 485 aa17.59■□□□□ 0.41
NCLN-203ENST00000587740 SPG21Q9NZD8 308 aa17.59■□□□□ 0.41
NCLN-203ENST00000587740 FAM205CA6NFA0 338 aa17.58■□□□□ 0.4
NCLN-203ENST00000587740 IPO5O00410 1097 aaKnown RBP17.58■□□□□ 0.4
NCLN-203ENST00000587740 CCNT1O60563 726 aaKnown RBP17.58■□□□□ 0.4
NCLN-203ENST00000587740 TDP2O95551 362 aa17.58■□□□□ 0.4
NCLN-203ENST00000587740 GCFC2P16383 781 aaKnown RBP17.58■□□□□ 0.4
NCLN-203ENST00000587740 PPM1AP35813 382 aa17.58■□□□□ 0.4
NCLN-203ENST00000587740 CLCN3P51790 818 aa17.58■□□□□ 0.4
NCLN-203ENST00000587740 KRT17Q04695 432 aa17.58■□□□□ 0.4
NCLN-203ENST00000587740 ITIH3Q06033 890 aa17.58■□□□□ 0.4
NCLN-203ENST00000587740 TPRNQ4KMQ1 711 aa17.58■□□□□ 0.4
NCLN-203ENST00000587740 MCTP1Q6DN14 999 aa17.58■□□□□ 0.4
NCLN-203ENST00000587740 PPP4R3AQ6IN85 833 aa17.58■□□□□ 0.4
NCLN-203ENST00000587740 CES5AQ6NT32 575 aa17.58■□□□□ 0.4
NCLN-203ENST00000587740 LRRC43Q8N309 656 aa17.58■□□□□ 0.4
NCLN-203ENST00000587740 METTL13Q8N6R0 699 aa17.58■□□□□ 0.4
NCLN-203ENST00000587740 C12orf76Q8N812 135 aaPredicted RBP17.58■□□□□ 0.4
NCLN-203ENST00000587740 NECTIN4Q96NY8 510 aa17.58■□□□□ 0.4
NCLN-203ENST00000587740 ADAMTS10Q9H324 1103 aa17.58■□□□□ 0.4
NCLN-203ENST00000587740 DDX25Q9UHL0 483 aaKnown RBP17.58■□□□□ 0.4
NCLN-203ENST00000587740 EP300Q09472 2414 aaPredicted RBP17.57■□□□□ 0.4
NCLN-203ENST00000587740 HOXA2O43364 376 aa17.57■□□□□ 0.4
NCLN-203ENST00000587740 U2AF2P26368 475 aaKnown RBP eCLIP17.57■□□□□ 0.4
NCLN-203ENST00000587740 SMC1AQ14683 1233 aaKnown RBP17.57■□□□□ 0.4
NCLN-203ENST00000587740 ASTLQ6HA08 431 aaPredicted RBP17.57■□□□□ 0.4
NCLN-203ENST00000587740 TRMT1LQ7Z2T5 733 aaKnown RBP17.57■□□□□ 0.4
NCLN-203ENST00000587740 NOSTRINQ8IVI9 506 aa17.57■□□□□ 0.4
NCLN-203ENST00000587740 LINC01465Q8N7H1 131 aa17.57■□□□□ 0.4
NCLN-203ENST00000587740 BBXQ8WY36 941 aaPredicted RBP17.57■□□□□ 0.4
NCLN-203ENST00000587740 LENG9Q96B70 501 aa17.57■□□□□ 0.4
NCLN-203ENST00000587740 MBOAT7Q96N66 472 aa17.57■□□□□ 0.4
NCLN-203ENST00000587740 TBC1D22BQ9NU19 505 aa17.57■□□□□ 0.4
NCLN-203ENST00000587740 TCEAL9Q9UHQ7 104 aa17.57■□□□□ 0.4
NCLN-203ENST00000587740 MAFBQ9Y5Q3 323 aaPredicted RBP17.57■□□□□ 0.4
NCLN-203ENST00000587740 NT5C1B-RDH14C9J2C7 533 aa17.56■□□□□ 0.4
NCLN-203ENST00000587740 MSH4O15457 936 aa17.56■□□□□ 0.4
NCLN-203ENST00000587740 NLRP11P59045 1033 aaKnown RBP17.56■□□□□ 0.4
NCLN-203ENST00000587740 BECN1Q14457 450 aa17.56■□□□□ 0.4
NCLN-203ENST00000587740 RARS2Q5T160 578 aaKnown RBP17.56■□□□□ 0.4
NCLN-203ENST00000587740 MIS18BP1Q6P0N0 1132 aa17.56■□□□□ 0.4
NCLN-203ENST00000587740 FRMD5Q7Z6J6 570 aa17.56■□□□□ 0.4
NCLN-203ENST00000587740 ZNF598Q86UK7 904 aaKnown RBP17.56■□□□□ 0.4
NCLN-203ENST00000587740 CKAP2LQ8IYA6 745 aa17.56■□□□□ 0.4
NCLN-203ENST00000587740 ZNF668Q96K58 619 aaPredicted RBP17.56■□□□□ 0.4
NCLN-203ENST00000587740 LIMD1Q9UGP4 676 aa17.56■□□□□ 0.4
NCLN-203ENST00000587740 NOL7Q9UMY1 257 aaKnown RBP17.56■□□□□ 0.4
NCLN-203ENST00000587740 ZNF292O60281 2723 aa17.56■□□□□ 0.4
NCLN-203ENST00000587740 CACNA1AO00555 2505 aa17.55■□□□□ 0.4
NCLN-203ENST00000587740 MARCH6O60337 910 aa17.55■□□□□ 0.4
NCLN-203ENST00000587740 ATP2B1P20020 1258 aa17.55■□□□□ 0.4
NCLN-203ENST00000587740 MTHFRP42898 656 aa17.55■□□□□ 0.4
NCLN-203ENST00000587740 TMEM173Q86WV6 379 aaPredicted RBP17.55■□□□□ 0.4
NCLN-203ENST00000587740 ZDHHC14Q8IZN3 488 aa17.55■□□□□ 0.4
NCLN-203ENST00000587740 ABI1Q8IZP0 508 aa17.55■□□□□ 0.4
NCLN-203ENST00000587740 RNF169Q8NCN4 708 aa17.55■□□□□ 0.4
NCLN-203ENST00000587740 HELQQ8TDG4 1101 aa17.55■□□□□ 0.4
NCLN-203ENST00000587740 VPS37CA5D8V6 355 aaPredicted RBP17.54■□□□□ 0.4
NCLN-203ENST00000587740 SLC37A4O43826 429 aa17.54■□□□□ 0.4
NCLN-203ENST00000587740 GAS7O60861 476 aa17.54■□□□□ 0.4
NCLN-203ENST00000587740 BAG4O95429 457 aaKnown RBP17.54■□□□□ 0.4
NCLN-203ENST00000587740 CXCL14O95715 111 aa17.54■□□□□ 0.4
NCLN-203ENST00000587740 ZSCAN20P17040 1043 aaPredicted RBP17.54■□□□□ 0.4
NCLN-203ENST00000587740 FGFR4P22455 802 aa17.54■□□□□ 0.4
NCLN-203ENST00000587740 EIF4BP23588 611 aaKnown RBP17.54■□□□□ 0.4
NCLN-203ENST00000587740 BCAR1P56945 870 aa17.54■□□□□ 0.4
NCLN-203ENST00000587740 CWF19L1Q69YN2 538 aaKnown RBP17.54■□□□□ 0.4
NCLN-203ENST00000587740 KIAA1841Q6NSI8 718 aa17.54■□□□□ 0.4
NCLN-203ENST00000587740 EFCAB12Q6NXP0 572 aa17.54■□□□□ 0.4
NCLN-203ENST00000587740 LRRC71Q8N4P6 559 aa17.54■□□□□ 0.4
NCLN-203ENST00000587740 TDRD5Q8NAT2 981 aaKnown RBP17.54■□□□□ 0.4
NCLN-203ENST00000587740 SPRYD3Q8NCJ5 442 aa17.54■□□□□ 0.4
NCLN-203ENST00000587740 AUTS2Q8WXX7 1259 aa17.54■□□□□ 0.4
NCLN-203ENST00000587740 SLC5A5Q92911 643 aa17.54■□□□□ 0.4
NCLN-203ENST00000587740 RIT2Q99578 217 aa17.54■□□□□ 0.4
NCLN-203ENST00000587740 TEKT3Q9BXF9 490 aa17.54■□□□□ 0.4
NCLN-203ENST00000587740 AKT3Q9Y243 479 aa17.54■□□□□ 0.4
NCLN-203ENST00000587740 DMXL1Q9Y485 3027 aa17.53■□□□□ 0.4
NCLN-203ENST00000587740 A0A0U1RQF3 1178 aa17.53■□□□□ 0.4
NCLN-203ENST00000587740 MAGEB2O15479 319 aa17.53■□□□□ 0.4
NCLN-203ENST00000587740 PI15O43692 258 aa17.53■□□□□ 0.4
NCLN-203ENST00000587740 EPCAMP16422 314 aa17.53■□□□□ 0.4
NCLN-203ENST00000587740 SYT1P21579 422 aa17.53■□□□□ 0.4
NCLN-203ENST00000587740 TRAPPC10P48553 1259 aa17.53■□□□□ 0.4
NCLN-203ENST00000587740 CLCN5P51795 746 aa17.53■□□□□ 0.4
NCLN-203ENST00000587740 LRCH2Q5VUJ6 765 aa17.53■□□□□ 0.4
NCLN-203ENST00000587740 ZNF746Q6NUN9 644 aaPredicted RBP17.53■□□□□ 0.4
NCLN-203ENST00000587740 VPS52Q8N1B4 723 aa17.53■□□□□ 0.4
NCLN-203ENST00000587740 ETNPPLQ8TBG4 499 aa17.53■□□□□ 0.4
NCLN-203ENST00000587740 SLC22A17Q8WUG5 538 aa17.53■□□□□ 0.4
NCLN-203ENST00000587740 FAM20AQ96MK3 541 aa17.53■□□□□ 0.4
NCLN-203ENST00000587740 ZBP1Q9H171 429 aa17.53■□□□□ 0.4
NCLN-203ENST00000587740 GABBR1Q9UBS5 961 aa17.53■□□□□ 0.4
NCLN-203ENST00000587740 MYH15Q9Y2K3 1946 aa17.53■□□□□ 0.4
NCLN-203ENST00000587740 DENND4AQ7Z401 1863 aa17.52■□□□□ 0.4
NCLN-203ENST00000587740 TBX3O15119 743 aa17.52■□□□□ 0.4
NCLN-203ENST00000587740 ZNF862O60290 1169 aa17.52■□□□□ 0.4
NCLN-203ENST00000587740 EOMESO95936 686 aa17.52■□□□□ 0.4
NCLN-203ENST00000587740 DARSP14868 501 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms