RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 NACC1Q96RE7 527 aa14.64□□□□□ -0.07
ERBB2-220ENST00000584684 MINDY3Q9H8M7 445 aa14.64□□□□□ -0.07
ERBB2-220ENST00000584684 ALG13Q9NP73 1137 aaKnown RBP14.64□□□□□ -0.07
ERBB2-220ENST00000584684 BMP2KQ9NSY1 1161 aaPredicted RBP14.64□□□□□ -0.07
ERBB2-220ENST00000584684 FAM105AQ9NUU6 356 aa14.64□□□□□ -0.07
ERBB2-220ENST00000584684 LZTS1Q9Y250 596 aa14.64□□□□□ -0.07
ERBB2-220ENST00000584684 STK24Q9Y6E0 443 aa14.64□□□□□ -0.07
ERBB2-220ENST00000584684 CARNS1A5YM72 827 aa14.63□□□□□ -0.07
ERBB2-220ENST00000584684 FGF18O76093 207 aa14.63□□□□□ -0.07
ERBB2-220ENST00000584684 SRGAP2CP0DJJ0 459 aa14.63□□□□□ -0.07
ERBB2-220ENST00000584684 IBSPP21815 317 aaPredicted RBP14.63□□□□□ -0.07
ERBB2-220ENST00000584684 DNAJB1P25685 340 aa14.63□□□□□ -0.07
ERBB2-220ENST00000584684 GJB2P29033 226 aa14.63□□□□□ -0.07
ERBB2-220ENST00000584684 HOXA11P31270 313 aaPredicted RBP14.63□□□□□ -0.07
ERBB2-220ENST00000584684 CAPSQ13938 189 aa14.63□□□□□ -0.07
ERBB2-220ENST00000584684 PDIA5Q14554 519 aa14.63□□□□□ -0.07
ERBB2-220ENST00000584684 NBR1Q14596 966 aa14.63□□□□□ -0.07
ERBB2-220ENST00000584684 CTC1Q2NKJ3 1217 aa14.63□□□□□ -0.07
ERBB2-220ENST00000584684 POTEGQ6S5H5 508 aa14.63□□□□□ -0.07
ERBB2-220ENST00000584684 LRRC55Q6ZSA7 311 aa14.63□□□□□ -0.07
ERBB2-220ENST00000584684 MCPH1Q8NEM0 835 aa14.63□□□□□ -0.07
ERBB2-220ENST00000584684 PPP2R3CQ969Q6 453 aa14.63□□□□□ -0.07
ERBB2-220ENST00000584684 CCDC51Q96ER9 411 aa14.63□□□□□ -0.07
ERBB2-220ENST00000584684 UHRF1Q96T88 793 aaPredicted RBP14.63□□□□□ -0.07
ERBB2-220ENST00000584684 RAB34Q9BZG1 259 aa14.63□□□□□ -0.07
ERBB2-220ENST00000584684 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.63□□□□□ -0.07
ERBB2-220ENST00000584684 HCSTQ9UBK5 93 aa14.63□□□□□ -0.07
ERBB2-220ENST00000584684 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.63□□□□□ -0.07
ERBB2-220ENST00000584684 PCDHB6Q9Y5E3 794 aa14.63□□□□□ -0.07
ERBB2-220ENST00000584684 TNFRSF10AO00220 468 aa14.62□□□□□ -0.07
ERBB2-220ENST00000584684 USO1O60763 962 aaKnown RBP14.62□□□□□ -0.07
ERBB2-220ENST00000584684 KCNA5P22460 613 aa14.62□□□□□ -0.07
ERBB2-220ENST00000584684 GLRA2P23416 452 aa14.62□□□□□ -0.07
ERBB2-220ENST00000584684 AXLP30530 894 aa14.62□□□□□ -0.07
ERBB2-220ENST00000584684 PLCB3Q01970 1234 aa14.62□□□□□ -0.07
ERBB2-220ENST00000584684 HYAL1Q12794 435 aa14.62□□□□□ -0.07
ERBB2-220ENST00000584684 PTGDRQ13258 359 aa14.62□□□□□ -0.07
ERBB2-220ENST00000584684 SPOUT1Q5T280 376 aaKnown RBP14.62□□□□□ -0.07
ERBB2-220ENST00000584684 PDE12Q6L8Q7 609 aaKnown RBP14.62□□□□□ -0.07
ERBB2-220ENST00000584684 RNF169Q8NCN4 708 aa14.62□□□□□ -0.07
ERBB2-220ENST00000584684 HELQQ8TDG4 1101 aa14.62□□□□□ -0.07
ERBB2-220ENST00000584684 ASAP3Q8TDY4 903 aa14.62□□□□□ -0.07
ERBB2-220ENST00000584684 POF1BQ8WVV4 589 aa14.62□□□□□ -0.07
ERBB2-220ENST00000584684 ZNF558Q96NG5 402 aa14.62□□□□□ -0.07
ERBB2-220ENST00000584684 BACH2Q9BYV9 841 aa14.62□□□□□ -0.07
ERBB2-220ENST00000584684 CNTNAP2Q9UHC6 1331 aa14.62□□□□□ -0.07
ERBB2-220ENST00000584684 FSD2A1L4K1 749 aa14.61□□□□□ -0.07
ERBB2-220ENST00000584684 TSPAN1O60635 241 aa14.61□□□□□ -0.07
ERBB2-220ENST00000584684 ERLIN2O94905 339 aa14.61□□□□□ -0.07
ERBB2-220ENST00000584684 MBTD1Q05BQ5 628 aa14.61□□□□□ -0.07
ERBB2-220ENST00000584684 CUL4AQ13619 759 aa14.61□□□□□ -0.07
ERBB2-220ENST00000584684 AMHR2Q16671 573 aa14.61□□□□□ -0.07
ERBB2-220ENST00000584684 PUS10Q3MIT2 529 aaKnown RBP14.61□□□□□ -0.07
ERBB2-220ENST00000584684 UBXN11Q5T124 520 aa14.61□□□□□ -0.07
ERBB2-220ENST00000584684 CDCA2Q69YH5 1023 aaPredicted RBP14.61□□□□□ -0.07
ERBB2-220ENST00000584684 KCNT2Q6UVM3 1135 aa14.61□□□□□ -0.07
ERBB2-220ENST00000584684 GLB1LQ6UWU2 654 aa14.61□□□□□ -0.07
ERBB2-220ENST00000584684 MRPL10Q7Z7H8 261 aaKnown RBP14.61□□□□□ -0.07
ERBB2-220ENST00000584684 THNSL1Q8IYQ7 743 aa14.61□□□□□ -0.07
ERBB2-220ENST00000584684 PGBD4Q96DM1 585 aa14.61□□□□□ -0.07
ERBB2-220ENST00000584684 POLR3FQ9H1D9 316 aaPredicted RBP14.61□□□□□ -0.07
ERBB2-220ENST00000584684 TLR9Q9NR96 1032 aa14.61□□□□□ -0.07
ERBB2-220ENST00000584684 LRWD1Q9UFC0 647 aa14.61□□□□□ -0.07
ERBB2-220ENST00000584684 SMC3Q9UQE7 1217 aa14.61□□□□□ -0.07
ERBB2-220ENST00000584684 PCDHB2Q9Y5E7 798 aa14.61□□□□□ -0.07
ERBB2-220ENST00000584684 TCF20Q9UGU0 1960 aaKnown RBP14.61□□□□□ -0.07
ERBB2-220ENST00000584684 ZMYM2Q9UBW7 1377 aa14.6□□□□□ -0.07
ERBB2-220ENST00000584684 ARHGEF35A5YM69 484 aa14.6□□□□□ -0.07
ERBB2-220ENST00000584684 H3BQV1 296 aa14.6□□□□□ -0.07
ERBB2-220ENST00000584684 FSCN2O14926 492 aa14.6□□□□□ -0.07
ERBB2-220ENST00000584684 INPPL1O15357 1258 aa14.6□□□□□ -0.07
ERBB2-220ENST00000584684 IRS1P35568 1242 aa14.6□□□□□ -0.07
ERBB2-220ENST00000584684 CCT6AP40227 531 aaKnown RBP14.6□□□□□ -0.07
ERBB2-220ENST00000584684 ATP2C1P98194 919 aaPredicted RBP14.6□□□□□ -0.07
ERBB2-220ENST00000584684 MCTP1Q6DN14 999 aa14.6□□□□□ -0.07
ERBB2-220ENST00000584684 NOTUMQ6P988 496 aa14.6□□□□□ -0.07
ERBB2-220ENST00000584684 CNNM3Q8NE01 707 aa14.6□□□□□ -0.07
ERBB2-220ENST00000584684 MRPS27Q92552 414 aaKnown RBP14.6□□□□□ -0.07
ERBB2-220ENST00000584684 INO80B-WBP1J3KQ70 363 aa14.59□□□□□ -0.07
ERBB2-220ENST00000584684 CYP11B2P19099 503 aa14.59□□□□□ -0.07
ERBB2-220ENST00000584684 NCLP19338 710 aaKnown RBP14.59□□□□□ -0.07
ERBB2-220ENST00000584684 LTBRP36941 435 aa14.59□□□□□ -0.07
ERBB2-220ENST00000584684 NCBP1Q09161 790 aaKnown RBP14.59□□□□□ -0.07
ERBB2-220ENST00000584684 NOMO2Q5JPE7 1267 aa14.59□□□□□ -0.07
ERBB2-220ENST00000584684 PADI6Q6TGC4 694 aa14.59□□□□□ -0.07
ERBB2-220ENST00000584684 PPP4R3CPQ6ZMV5 832 aa14.59□□□□□ -0.07
ERBB2-220ENST00000584684 SLC39A11Q8N1S5 342 aa14.59□□□□□ -0.07
ERBB2-220ENST00000584684 KCTD17Q8N5Z5 321 aa14.59□□□□□ -0.07
ERBB2-220ENST00000584684 EFHBQ8N7U6 833 aa14.59□□□□□ -0.07
ERBB2-220ENST00000584684 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.59□□□□□ -0.07
ERBB2-220ENST00000584684 SNX29Q8TEQ0 813 aa14.59□□□□□ -0.07
ERBB2-220ENST00000584684 PRIMPOLQ96LW4 560 aa14.59□□□□□ -0.07
ERBB2-220ENST00000584684 CDCA3Q99618 268 aaPredicted RBP14.59□□□□□ -0.07
ERBB2-220ENST00000584684 TBC1D13Q9NVG8 400 aa14.59□□□□□ -0.07
ERBB2-220ENST00000584684 CLDND1Q9NY35 253 aa14.59□□□□□ -0.07
ERBB2-220ENST00000584684 SPG21Q9NZD8 308 aa14.59□□□□□ -0.07
ERBB2-220ENST00000584684 DAXXQ9UER7 740 aaPredicted RBP14.59□□□□□ -0.07
ERBB2-220ENST00000584684 PUF60Q9UHX1 559 aaKnown RBP14.59□□□□□ -0.07
ERBB2-220ENST00000584684 GRXCR2A6NFK2 248 aa14.58□□□□□ -0.08
ERBB2-220ENST00000584684 MEIS3P2A8K0S8 358 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms