RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 GCOM1H8Y6P7 765 aaPredicted RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 DKC1O60832 514 aaKnown RBP eCLIP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 PLEKHA8P1O95397 391 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 LARGE1O95461 756 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 SNAI1O95863 264 aaPredicted RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 EFEMP2O95967 443 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 CD4P01730 458 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 POLR2MP0CAP2 368 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 FCER1AP12319 257 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 EPB42P16452 691 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 EIF2AK2P19525 551 aaKnown RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 GSTT1P30711 240 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 KRT2P35908 639 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 CACNB3P54284 484 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 HMGCS2P54868 508 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 BMT2Q1RMZ1 405 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 CEP135Q66GS9 1140 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 CCNJLQ8IV13 435 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 NOSTRINQ8IVI9 506 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 C12orf56Q8IXR9 622 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 BLIDQ8IZY5 108 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 CRIPAKQ8N1N5 446 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 NUP133Q8WUM0 1156 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 ZNF837Q96EG3 531 aaPredicted RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 WDR11Q9BZH6 1224 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 AGO4Q9HCK5 861 aaKnown RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 ANKEF1Q9NU02 776 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 CGNQ9P2M7 1197 aaKnown RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 GMPR2Q9P2T1 348 aaKnown RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 TRIM33Q9UPN9 1127 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 DENND4CQ5VZ89 1909 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 DOCK3Q8IZD9 2030 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 TMEM238LA0A1B0GVL6 79 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 F8W031 263 aaPredicted RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 SEPT4O43236 478 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 GDF11O95390 407 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 F13A1P00488 732 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 F2P00734 622 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 CXCL10P02778 98 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 PSAPP07602 524 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 FAM163BP0C2L3 166 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 MCM4P33991 863 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 KRT76Q01546 638 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 ARHGAP1Q07960 439 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 GNL2Q13823 731 aaKnown RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 BECN1Q14457 450 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 TCEAL1Q15170 157 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 TRIM71Q2Q1W2 868 aaKnown RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 CDCA2Q69YH5 1023 aaPredicted RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 TTBK2Q6IQ55 1244 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 GDF6Q6KF10 455 aaPredicted RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 ABHD15Q6UXT9 468 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 GK5Q6ZS86 529 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 OTOP1Q7RTM1 612 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 C4orf19Q8IY42 314 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 CCDC155Q8N6L0 562 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 PHC3Q8NDX5 983 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 SPATA18Q8TC71 538 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 BRF1Q92994 677 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 ATG4CQ96DT6 458 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 FAM167AQ96KS9 214 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 SLKQ9H2G2 1235 aaPredicted RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 FAM86C1Q9NVL1 165 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 CEP131Q9UPN4 1083 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 ZDHHC9Q9Y397 364 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 SRPRBQ9Y5M8 271 aaKnown RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 PLXNA4Q9HCM2 1894 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 MTCL1Q9Y4B5 1905 aaKnown RBP3.41□□□□□ -1.86
CCDC178-213ENST00000583930 TMEM232C9JQI7 657 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 NMT2O60551 498 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 COBLO75128 1261 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 PFKMP08237 780 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 ZSCAN22P10073 491 aaPredicted RBP3.41□□□□□ -1.86
CCDC178-213ENST00000583930 EDN3P14138 238 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 HOXA13P31271 388 aaPredicted RBP3.41□□□□□ -1.86
CCDC178-213ENST00000583930 TOB1P50616 345 aaPredicted RBP3.41□□□□□ -1.86
CCDC178-213ENST00000583930 MRPS9P82933 396 aaKnown RBP3.41□□□□□ -1.86
CCDC178-213ENST00000583930 MGAT3Q09327 533 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 APOBRQ0VD83 1088 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 TCP10Q12799 353 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 GRM1Q13255 1194 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 CAMK2GQ13555 558 aaPredicted RBP3.41□□□□□ -1.86
CCDC178-213ENST00000583930 LAMC2Q13753 1193 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 SLC39A14Q15043 492 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 FAM47AQ5JRC9 791 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 CELF3Q5SZQ8 465 aaKnown RBP3.41□□□□□ -1.86
CCDC178-213ENST00000583930 METTL7BQ6UX53 244 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 LRRC47Q8N1G4 583 aaKnown RBP3.41□□□□□ -1.86
CCDC178-213ENST00000583930 NME8Q8N427 588 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 CCDC51Q96ER9 411 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 TMEM74Q96NL1 305 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 TRERF1Q96PN7 1200 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 MMP19Q99542 508 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 HSD17B14Q9BPX1 270 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 NTPCRQ9BSD7 190 aaKnown RBP3.41□□□□□ -1.86
CCDC178-213ENST00000583930 TNKS2Q9H2K2 1166 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 CBX8Q9HC52 389 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 RNF146Q9NTX7 359 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 MARK1Q9P0L2 795 aa3.41□□□□□ -1.86
CCDC178-213ENST00000583930 COL20A1Q9P218 1284 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms