RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 SPAG6O75602 509 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 SLC25A27O95847 323 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 POTEIP0CG38 1075 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 VSNL1P62760 191 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 POTEGQ6S5H5 508 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 POTEEQ6S8J3 1075 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 RPAINQ86UA6 219 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 CD302Q8IX05 232 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 AFAP1L2Q8N4X5 818 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 VCPIP1Q96JH7 1222 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 PNMA5Q96PV4 448 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 MMS19Q96T76 1030 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 BLOC1S4Q9NUP1 217 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 POLLQ9UGP5 575 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 HPCAL4Q9UM19 191 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 PCDHGC5Q9Y5F6 944 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 CFAP69A5D8W1 941 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 PMM2O15305 246 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 RPS6KA5O75582 802 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 RPLP2P05387 115 aaKnown RBP6.28□□□□□ -1.4
RTTN-209ENST00000583043 ABCB4P21439 1286 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 STX2P32856 288 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 GIT2Q14161 759 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 CTTNQ14247 550 aaKnown RBP6.28□□□□□ -1.4
RTTN-209ENST00000583043 MAP3K21Q5TCX8 1036 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 KIRREL3Q8IZU9 778 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 TEX13BQ9BXU2 312 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 INTS9Q9NV88 658 aaKnown RBP6.28□□□□□ -1.4
RTTN-209ENST00000583043 TXNDC16Q9P2K2 825 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 IGKV6D-41A0A0C4DH26 115 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 K7ERI5 159 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 MSH4O15457 936 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 FGGP02679 453 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 SLC26A2P50443 739 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 YARSP54577 528 aaKnown RBP6.28□□□□□ -1.4
RTTN-209ENST00000583043 TGFB2P61812 414 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 RAD51AP2Q09MP3 1159 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 MXD4Q14582 209 aaPredicted RBP6.28□□□□□ -1.4
RTTN-209ENST00000583043 STAT4Q14765 748 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 CATSPER3Q86XQ3 398 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 PPFIBP2Q8ND30 876 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 PPP1R14CQ8TAE6 165 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 CHP1Q99653 195 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 SEMA6BQ9H3T3 888 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 ATF5Q9Y2D1 282 aaPredicted RBP6.28□□□□□ -1.4
RTTN-209ENST00000583043 SIK3Q9Y2K2 1263 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 COL2A1P02458 1487 aaPredicted RBP6.28□□□□□ -1.4
RTTN-209ENST00000583043 HIP1RO75146 1068 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 VIMP08670 466 aaKnown RBP6.28□□□□□ -1.4
RTTN-209ENST00000583043 GFPT1Q06210 699 aaPredicted RBP6.28□□□□□ -1.4
RTTN-209ENST00000583043 CCDC38Q502W7 563 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 TATDN1Q6P1N9 297 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 DNAJC24Q6P3W2 148 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 GLG1Q92896 1179 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 DCPSQ96C86 337 aaKnown RBP6.28□□□□□ -1.4
RTTN-209ENST00000583043 KIAA1683Q9H0B3 1180 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 ST6GALNAC4Q9H4F1 302 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 KCNK9Q9NPC2 374 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 RNF146Q9NTX7 359 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 MRGBPQ9NV56 204 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 CNOT7Q9UIV1 285 aaKnown RBP6.28□□□□□ -1.4
RTTN-209ENST00000583043 PCDHB2Q9Y5E7 798 aa6.28□□□□□ -1.4
RTTN-209ENST00000583043 CFAP73A6NFT4 308 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 ASB14A6NK59 587 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 I3L4J1 428 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 TOMM70O94826 608 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 FTCDO95954 541 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 COG2Q14746 738 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 MTF1Q14872 753 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 KLHL38Q2WGJ6 581 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 MEI1Q5TIA1 1274 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 RSAD2Q8WXG1 361 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 MTRQ99707 1265 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 TDRD3Q9H7E2 651 aaKnown RBP6.27□□□□□ -1.41
RTTN-209ENST00000583043 DONSONQ9NYP3 566 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 NAGPAQ9UK23 515 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 TTC7AQ9ULT0 858 aaPredicted RBP6.27□□□□□ -1.41
RTTN-209ENST00000583043 COL18A1P39060 1754 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 DDX39AO00148 427 aaKnown RBP6.27□□□□□ -1.41
RTTN-209ENST00000583043 AP3B1O00203 1094 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 IL18RAPO95256 599 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 CASP1P29466 404 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 HPDP32754 393 aaPredicted RBP6.27□□□□□ -1.41
RTTN-209ENST00000583043 CAP2P40123 477 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 PPP2R2AP63151 447 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 MCL1Q07820 350 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 PDE4CQ08493 712 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 KDM7AQ6ZMT4 941 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 SULF1Q8IWU6 871 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 ALKBH8Q96BT7 664 aaKnown RBP6.27□□□□□ -1.41
RTTN-209ENST00000583043 TRIM62Q9BVG3 475 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 SEPT9Q9UHD8 586 aaPredicted RBP6.27□□□□□ -1.41
RTTN-209ENST00000583043 ANAPC5Q9UJX4 755 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 MYO1EQ12965 1108 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 MAPK6Q16659 721 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 CENPUQ71F23 418 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 CCDC125Q86Z20 511 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 TMEM139Q8IV31 216 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 RCOR2Q8IZ40 523 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 ANKRD13CQ8N6S4 541 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms