RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 CYP26B1Q9NR63 512 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 CHST12Q9NRB3 414 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 FAM105AQ9NUU6 356 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 RGL1Q9NZL6 768 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 HCFC2Q9Y5Z7 792 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 ZBTB39O15060 712 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 CLASP2O75122 1294 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 CTDNEP1O95476 244 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 XBP1P17861 261 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 CDC42EP1Q00587 391 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 NHLH1Q02575 133 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 CYP4A11Q02928 519 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 RNASELQ05823 741 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 CTTNQ14247 550 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 NOMO2Q5JPE7 1267 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 KANK3Q6NY19 840 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 GLB1LQ6UWU2 654 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 TMEM184AQ6ZMB5 413 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 ZBTB33Q86T24 672 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 C12orf76Q8N812 135 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 MRPL43Q8N983 215 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 NECAB1Q8N987 351 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 TMEM87AQ8NBN3 555 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 BCL7CQ8WUZ0 217 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 SLC7A3Q8WY07 619 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 HAS1Q92839 578 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 CASP10Q92851 521 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 DYDC2Q96IM9 177 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 LXNQ9BS40 222 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 INO80BQ9C086 356 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 NRDE2Q9H7Z3 1164 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 MINDY3Q9H8M7 445 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 IFT122Q9HBG6 1241 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 TBC1D13Q9NVG8 400 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 ORC3Q9UBD5 711 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 DNAJB4Q9UDY4 337 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 COL4A3BPQ9Y5P4 624 aa13.02□□□□□ -0.33
CDK5RAP3-223ENST00000582114 B4GALT3O60512 393 aa13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 PFKFB2O60825 505 aa13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 OFD1O75665 1012 aa13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 P4HBP07237 508 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 AFF1P51825 1210 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 NR5A1Q13285 461 aa13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 RARS2Q5T160 578 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 IER5LQ5T953 404 aa13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 PPP4R3AQ6IN85 833 aa13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 ZNF280BQ86YH2 543 aa13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 FEZF2Q8TBJ5 459 aa13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 PRPF31Q8WWY3 499 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 PSPC1Q8WXF1 523 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 FAM20AQ96MK3 541 aa13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 JPH2Q9BR39 696 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 ZBP1Q9H171 429 aa13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 POMKQ9H5K3 350 aa13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 AGPAT5Q9NUQ2 364 aa13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 PCDHB2Q9Y5E7 798 aa13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 STK36Q9NRP7 1315 aa13.01□□□□□ -0.33
CDK5RAP3-223ENST00000582114 LARGE1O95461 756 aa13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 SSBP05455 408 aaKnown RBP eCLIP13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 GALTP07902 379 aa13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 SKIP12755 728 aa13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 GCFC2P16383 781 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 EPCAMP16422 314 aa13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 YWHABP31946 246 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 SLC11A1P49279 550 aa13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 MRE11P49959 708 aa13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 AK2P54819 239 aa13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 LAMTOR4Q0VGL1 99 aa13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 EMC2Q15006 297 aa13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 TPRNQ4KMQ1 711 aa13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 AGMOQ6ZNB7 445 aa13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 FAM177A1Q8N128 213 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 RNF149Q8NC42 400 aa13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 IGSF21Q96ID5 467 aa13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 TRAIPQ9BWF2 469 aa13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 DHX33Q9H6R0 707 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 ZNF318Q5VUA4 2279 aa13□□□□□ -0.33
CDK5RAP3-223ENST00000582114 C2CD4DB7Z1M9 353 aa12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 DKC1O60832 514 aaKnown RBP eCLIP12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 POMCP01189 267 aa12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 HOXB8P17481 243 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 KRT2P35908 639 aa12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 RAB27AP51159 221 aa12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 SIGLEC14Q08ET2 396 aa12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 BMS1Q14692 1282 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 EPHA7Q15375 998 aa12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 PTPN21Q16825 1174 aa12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 XKR9Q5GH70 373 aa12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 CES5AQ6NT32 575 aa12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 TPH2Q8IWU9 490 aa12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 SUGP1Q8IWZ8 645 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 PRSS33Q8NF86 280 aa12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 URGCPQ8TCY9 931 aa12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 PGBD4Q96DM1 585 aa12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 PHOX2BQ99453 314 aa12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 VN1R3Q9BXE9 311 aa12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 ADAM7Q9H2U9 754 aa12.99□□□□□ -0.33
CDK5RAP3-223ENST00000582114 ARID2Q68CP9 1835 aa12.98□□□□□ -0.33
CDK5RAP3-223ENST00000582114 A0A087WWV3 80 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms