RNA–Protein interactions for RNA: ENST00000581698.1

ATPAF2-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-211ENST00000581698 ITGB1P05556 798 aa16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 SFPQP23246 707 aaKnown RBP eCLIP16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 CTNNB1P35222 781 aa16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 CDC42EP1Q00587 391 aa16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 POU5F1BQ06416 359 aa16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 ARL6IP4Q66PJ3 421 aaKnown RBP16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 AGMOQ6ZNB7 445 aa16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 FAM43BQ6ZT52 329 aaPredicted RBP16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 USP28Q96RU2 1077 aa16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 KIFC3Q9BVG8 833 aa16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 EIF2AQ9BY44 585 aaKnown RBP16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 NFKBIZQ9BYH8 718 aa16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 CHST12Q9NRB3 414 aa16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 BLOC1S4Q9NUP1 217 aa16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 TYW1Q9NV66 732 aaKnown RBP16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 FBXO2Q9UK22 296 aaPredicted RBP16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 PIN4Q9Y237 131 aaKnown RBP16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 PCDHB7Q9Y5E2 793 aa16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 PCDHGC5Q9Y5F6 944 aa16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 C5orf42Q9H799 3197 aa16.7■□□□□ 0.26
ATPAF2-211ENST00000581698 ZNF623O75123 536 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 EYA4O95677 639 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 STAG3L1P0CL83 205 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 PBX3P40426 434 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 GPM6BQ13491 265 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 LONRF3Q496Y0 759 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 ODR4Q5SWX8 454 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 HAUS3Q68CZ6 603 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 C1orf186Q6ZWK4 172 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 TAS1R3Q7RTX0 852 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 CATSPER4Q7RTX7 472 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 CDR2LQ86X02 465 aaPredicted RBP16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 EXOC8Q8IYI6 725 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 MICALL1Q8N3F8 863 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 ERMNQ8TAM6 284 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 CPB2Q96IY4 423 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 SAMD11Q96NU1 681 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 PLIN2Q99541 437 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 RNF39Q9H2S5 420 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 FAM105AQ9NUU6 356 aa16.69■□□□□ 0.26
ATPAF2-211ENST00000581698 BDP1A6H8Y1 2624 aa16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 ARHGEF35A5YM69 484 aa16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 ASAP2O43150 1006 aa16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 STX6O43752 255 aa16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 ARF4P18085 180 aaPredicted RBP16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 IRS1P35568 1242 aa16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 SLC12A3P55017 1021 aa16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 MXD4Q14582 209 aaPredicted RBP16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 COL19A1Q14993 1142 aa16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 ARSHQ5FYA8 562 aa16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 MRPL10Q7Z7H8 261 aaKnown RBP16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 TMEM173Q86WV6 379 aaPredicted RBP16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 KLHL23Q8NBE8 558 aa16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 SPPL3Q8TCT6 385 aa16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 HELQQ8TDG4 1101 aa16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 BCL7CQ8WUZ0 217 aaPredicted RBP16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 MRPL38Q96DV4 380 aaKnown RBP16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 TMEM117Q9H0C3 514 aa16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 CXCL16Q9H2A7 254 aa16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 FZD8Q9H461 694 aa16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 ALG13Q9NP73 1137 aaKnown RBP16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 LMCD1Q9NZU5 365 aa16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 PLAGL2Q9UPG8 496 aa16.68■□□□□ 0.26
ATPAF2-211ENST00000581698 ZSCAN20P17040 1043 aaPredicted RBP16.67■□□□□ 0.26
ATPAF2-211ENST00000581698 PDCP20941 246 aa16.67■□□□□ 0.26
ATPAF2-211ENST00000581698 TFF2Q03403 129 aa16.67■□□□□ 0.26
ATPAF2-211ENST00000581698 RINT1Q6NUQ1 792 aa16.67■□□□□ 0.26
ATPAF2-211ENST00000581698 PPP4R3CPQ6ZMV5 832 aa16.67■□□□□ 0.26
ATPAF2-211ENST00000581698 COLGALT1Q8NBJ5 622 aa16.67■□□□□ 0.26
ATPAF2-211ENST00000581698 SLC17A8Q8NDX2 589 aa16.67■□□□□ 0.26
ATPAF2-211ENST00000581698 MCPH1Q8NEM0 835 aa16.67■□□□□ 0.26
ATPAF2-211ENST00000581698 CLIC6Q96NY7 704 aa16.67■□□□□ 0.26
ATPAF2-211ENST00000581698 LRFN2Q9ULH4 789 aa16.67■□□□□ 0.26
ATPAF2-211ENST00000581698 PCDHB2Q9Y5E7 798 aa16.67■□□□□ 0.26
ATPAF2-211ENST00000581698 A0A087X0B3 334 aa16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 NPHP3-ACAD11A0A0J9YXS1 232 aa16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 OFD1O75665 1012 aa16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 EOMESO95936 686 aa16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 RB1P06400 928 aa16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 MARCKSP29966 332 aaPredicted RBP16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 GTF2F1P35269 517 aaKnown RBP eCLIP16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 SPECC1Q5M775 1068 aa16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 KRT79Q5XKE5 535 aa16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 EEF1DP3Q658K8 133 aa16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 TWF2Q6IBS0 349 aaKnown RBP16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 ADGRD2Q7Z7M1 963 aa16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 RNF169Q8NCN4 708 aa16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 P2RX5Q93086 422 aa16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 EPSTI1Q96J88 318 aa16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 CHAMP1Q96JM3 812 aa16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 VN1R3Q9BXE9 311 aa16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 INO80BQ9C086 356 aaPredicted RBP16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 CSRNP2Q9H175 543 aa16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 ZDHHC9Q9Y397 364 aa16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 HES2Q9Y543 173 aa16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 MORC2Q9Y6X9 1032 aaPredicted RBP16.66■□□□□ 0.26
ATPAF2-211ENST00000581698 INO80B-WBP1J3KQ70 363 aa16.65■□□□□ 0.26
ATPAF2-211ENST00000581698 HIP1RO75146 1068 aa16.65■□□□□ 0.26
ATPAF2-211ENST00000581698 KARSQ15046 597 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms