RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 GPR32O75388 356 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 CNPP09543 421 aaKnown RBP8.8□□□□□ -1
SMARCE1-217ENST00000580654 TDGF1P13385 188 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 CRYBB1P53674 252 aaPredicted RBP8.8□□□□□ -1
SMARCE1-217ENST00000580654 POLGP54098 1239 aaPredicted RBP8.8□□□□□ -1
SMARCE1-217ENST00000580654 GPC5P78333 572 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 LPAL2Q16609 132 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 KIZQ2M2Z5 673 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 MCMDC2Q4G0Z9 681 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 CCDC178Q5BJE1 867 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 PPFIBP1Q86W92 1011 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 IQCA1Q86XH1 822 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 ABI1Q8IZP0 508 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 BBXQ8WY36 941 aaPredicted RBP8.8□□□□□ -1
SMARCE1-217ENST00000580654 IGSF21Q96ID5 467 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 BCO2Q9BYV7 579 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 RNF41Q9H4P4 317 aaPredicted RBP8.8□□□□□ -1
SMARCE1-217ENST00000580654 ZSWIM5Q9P217 1185 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 KIAA1468Q9P260 1216 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 GMEB2Q9UKD1 530 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 ZMIZ1Q9ULJ6 1067 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 UBIAD1Q9Y5Z9 338 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 NUMBLQ9Y6R0 609 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 CNOT1A5YKK6 2376 aaKnown RBP8.8□□□□□ -1
SMARCE1-217ENST00000580654 SALL3Q9BXA9 1300 aa8.8□□□□□ -1
SMARCE1-217ENST00000580654 BPTFQ12830 3046 aa8.79□□□□□ -1
SMARCE1-217ENST00000580654 CCDC195A0A1B0GUA6 201 aa8.79□□□□□ -1
SMARCE1-217ENST00000580654 C1QTNF9BB2RNN3 333 aa8.79□□□□□ -1
SMARCE1-217ENST00000580654 B4GALT3O60512 393 aa8.79□□□□□ -1
SMARCE1-217ENST00000580654 PAPLNO95428 1278 aa8.79□□□□□ -1
SMARCE1-217ENST00000580654 C1QTNF9P0C862 333 aa8.79□□□□□ -1
SMARCE1-217ENST00000580654 LAMP2P13473 410 aa8.79□□□□□ -1
SMARCE1-217ENST00000580654 ALDH7A1P49419 539 aaKnown RBP8.79□□□□□ -1
SMARCE1-217ENST00000580654 STAT5BP51692 787 aa8.79□□□□□ -1
SMARCE1-217ENST00000580654 SNW1Q13573 536 aaKnown RBP8.79□□□□□ -1
SMARCE1-217ENST00000580654 BMS1Q14692 1282 aaKnown RBP8.79□□□□□ -1
SMARCE1-217ENST00000580654 SEC23AQ15436 765 aa8.79□□□□□ -1
SMARCE1-217ENST00000580654 ODR4Q5SWX8 454 aa8.79□□□□□ -1
SMARCE1-217ENST00000580654 PLPPR4Q7Z2D5 763 aa8.79□□□□□ -1
SMARCE1-217ENST00000580654 TMEM87AQ8NBN3 555 aa8.79□□□□□ -1
SMARCE1-217ENST00000580654 RNF169Q8NCN4 708 aa8.79□□□□□ -1
SMARCE1-217ENST00000580654 ZNF707Q96C28 371 aaPredicted RBP8.79□□□□□ -1
SMARCE1-217ENST00000580654 RHOBTB2Q9BYZ6 727 aa8.79□□□□□ -1
SMARCE1-217ENST00000580654 NRDE2Q9H7Z3 1164 aa8.79□□□□□ -1
SMARCE1-217ENST00000580654 PRMT8Q9NR22 394 aaPredicted RBP8.79□□□□□ -1
SMARCE1-217ENST00000580654 MAN1C1Q9NR34 630 aa8.79□□□□□ -1
SMARCE1-217ENST00000580654 HELZ2Q9BYK8 2649 aaKnown RBP8.79□□□□□ -1
SMARCE1-217ENST00000580654 PNMA6FA0A0J9YX94 578 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 FAM170BA6NMN3 283 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 PIK3CDO00329 1044 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 TM4SF5O14894 197 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 INPPL1O15357 1258 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 ZC3H11AO75152 810 aaKnown RBP eCLIP8.78□□□□□ -1
SMARCE1-217ENST00000580654 RFPL2O75678 378 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 VTNP04004 478 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 GALTP07902 379 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 MYBP10242 640 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 CD72P21854 359 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 KLRC2P26717 231 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 ACTR2P61160 394 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 NMIQ13287 307 aaPredicted RBP8.78□□□□□ -1
SMARCE1-217ENST00000580654 FZD5Q13467 585 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 MTMR1Q13613 665 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 UBXN2BQ14CS0 331 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 MLF2Q15773 248 aaPredicted RBP8.78□□□□□ -1
SMARCE1-217ENST00000580654 PRR23CQ6ZRP0 262 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 SMARCC2Q8TAQ2 1214 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 STAMQ92783 540 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 FGF14Q92915 247 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 MAP4K1Q92918 833 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 CLDN23Q96B33 292 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 CDHR1Q96JP9 859 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 OSBPL6Q9BZF3 934 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 AZI2Q9H6S1 392 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 JPH1Q9HDC5 661 aaPredicted RBP8.78□□□□□ -1
SMARCE1-217ENST00000580654 LTB4R2Q9NPC1 389 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 SEMA4GQ9NTN9 838 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 SLC9A2Q9UBY0 812 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 DNAJB4Q9UDY4 337 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 PCDHGA10Q9Y5H3 936 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 WDFY3Q8IZQ1 3526 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 IGF2RP11717 2491 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 NAV2Q8IVL1 2488 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 GREB1Q4ZG55 1949 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 WDR81Q562E7 1941 aa8.78□□□□□ -1
SMARCE1-217ENST00000580654 UNC79Q9P2D8 2635 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 ITPR1Q14643 2758 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 IGKV6D-21A0A0A0MT36 114 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 A0A0U1RQF3 1178 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 SHISA7A6NL88 538 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 MEIS3P2A8K0S8 358 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 ZNF213O14771 459 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 LRP3O75074 770 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 ATG7O95352 703 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 C22orf31O95567 290 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 SSBP05455 408 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 MS4A1P11836 297 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 MX1P20591 662 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 ATP4AP20648 1035 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 SLC11A1P49279 550 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms