RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	MGAT3	Q09327	533 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	GIT2	Q14161	759 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	PPP2R5D	Q14738	602 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	UBE3C	Q15386	1083 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	LPAL2	Q16609	132 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	LETM2	Q2VYF4	491 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	AASDH	Q4L235	1098 aa	Predicted RBP	6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	WDR44	Q5JSH3	913 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	IER5	Q5VY09	327 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	BTNL9	Q6UXG8	535 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	FAM43B	Q6ZT52	329 aa	Predicted RBP	6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	CYP2U1	Q7Z449	544 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	GPR149	Q86SP6	731 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	SSH3	Q8TE77	659 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	RSAD2	Q8WXG1	361 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	LINC01599	Q8WXQ3	324 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	TAAR1	Q96RJ0	339 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	FOXQ1	Q9C009	403 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	GRIP2	Q9C0E4	1043 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	SFXN1	Q9H9B4	322 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	NOP58	Q9Y2X3	529 aa	Known RBP	6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	CDY2A	Q9Y6F7	541 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	GCN1	Q92616	2671 aa	Known RBP	6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	MTCL1	Q9Y4B5	1905 aa	Known RBP	6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	WDR19	Q8NEZ3	1342 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	SHROOM3	Q8TF72	1996 aa		6.97	□□□□□ -1.29
KPNB1-209	ENST00000580158	PLIN4	Q96Q06	1357 aa		6.96	□□□□□ -1.29
KPNB1-209	ENST00000580158	LRRN2	O75325	713 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	KCNK5	O95279	499 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	APP	P05067	770 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	FBXO45	P0C2W1	286 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	EIF2AK2	P19525	551 aa	Known RBP	6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	MX2	P20592	715 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	TDO2	P48775	406 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	LIMK1	P53667	647 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	PAK2	Q13177	524 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	UBXN2B	Q14CS0	331 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	USH1G	Q495M9	461 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	SLFNL1	Q499Z3	407 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	SOWAHC	Q53LP3	525 aa	Predicted RBP	6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	TTBK2	Q6IQ55	1244 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	KCNT2	Q6UVM3	1135 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	PPFIBP1	Q86W92	1011 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	MCF2L2	Q86YR7	1114 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	ERC1	Q8IUD2	1116 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	LMBR1	Q8WVP7	490 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	DNAJB3	Q8WWF6	145 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	ZCCHC14	Q8WYQ9	949 aa	Known RBP	6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	NELL1	Q92832	810 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	ZNF558	Q96NG5	402 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	OSBPL6	Q9BZF3	934 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	AGO3	Q9H9G7	860 aa	Known RBP	6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	TIMMDC1	Q9NPL8	285 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	PAG1	Q9NWQ8	432 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	SPG21	Q9NZD8	308 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	PADI3	Q9ULW8	664 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	SPAG17	Q6Q759	2223 aa		6.96	□□□□□ -1.3
KPNB1-209	ENST00000580158	EVPL	Q92817	2033 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	TSPY2	A6NKD2	308 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	FAM170B	A6NMN3	283 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	GSG1L2	A8MUP6	293 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	F11	P03951	625 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	HSPD1	P10809	573 aa	Known RBP	6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	MYCL	P12524	364 aa	Predicted RBP	6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	EPCAM	P16422	314 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	ADAM17	P78536	824 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	MRPS6	P82932	125 aa	Known RBP	6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	PRKCQ	Q04759	706 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	CLN3	Q13286	438 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	PLA2G4E	Q3MJ16	856 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	CCDC184	Q52MB2	194 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	ODR4	Q5SWX8	454 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	FAM102B	Q5T8I3	360 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	TSSK4	Q6SA08	328 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	C15orf39	Q6ZRI6	1047 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	C12orf50	Q8NA57	414 aa	Predicted RBP	6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	SYTL5	Q8TDW5	730 aa	Predicted RBP	6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	ARHGAP45	Q92619	1136 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	CLUAP1	Q96AJ1	413 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	ACD	Q96AP0	544 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	KLHL5	Q96PQ7	755 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	PUS7L	Q9H0K6	701 aa	Known RBP	6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	CWH43	Q9H720	699 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	ATP6V0A4	Q9HBG4	840 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	SLC2A4RG	Q9NR83	387 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	C1orf112	Q9NSG2	853 aa		6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	FRMPD2	Q68DX3	1309 aa	Predicted RBP	6.95	□□□□□ -1.3
KPNB1-209	ENST00000580158	LAMA4	Q16363	1823 aa		6.94	□□□□□ -1.3
KPNB1-209	ENST00000580158	NAV2	Q8IVL1	2488 aa		6.94	□□□□□ -1.3
KPNB1-209	ENST00000580158	ASH1L	Q9NR48	2969 aa	Known RBP	6.94	□□□□□ -1.3
KPNB1-209	ENST00000580158	COL4A3	Q01955	1670 aa		6.94	□□□□□ -1.3
KPNB1-209	ENST00000580158	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	6.94	□□□□□ -1.3
KPNB1-209	ENST00000580158	DENND3	A2RUS2	1198 aa		6.94	□□□□□ -1.3
KPNB1-209	ENST00000580158	SPATA31C2	B4DYI2	1134 aa		6.94	□□□□□ -1.3
KPNB1-209	ENST00000580158	TM4SF5	O14894	197 aa		6.94	□□□□□ -1.3
KPNB1-209	ENST00000580158	PDIA4	P13667	645 aa	Known RBP	6.94	□□□□□ -1.3
KPNB1-209	ENST00000580158	SNW1	Q13573	536 aa	Known RBP	6.94	□□□□□ -1.3
KPNB1-209	ENST00000580158	SIM2	Q14190	667 aa	Predicted RBP	6.94	□□□□□ -1.3
KPNB1-209	ENST00000580158	ZBTB41	Q5SVQ8	909 aa		6.94	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms